EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000006080 (Gene tree)
Gene ID: 108260266
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 19561 bases
Position: chr28:7129936-7149496
Accession: 108260266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008889	MRP-S27	PF10037.9	7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000009279	-	3684	XM_017460391	ENSIPUP00000008889	383 (aa)	XP_017315880	A0A2D0QEU1

Gene Model

Click here to download ENSIPUG00000006080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006080	ptcd2	90	44.509	ENSG00000049883	PTCD2	94	39.791	Homo_sapiens
ENSIPUG00000006080	ptcd2	99	56.136	ENSAPOG00000020682	ptcd2	95	56.131	Acanthochromis_polyacanthus
ENSIPUG00000006080	ptcd2	91	44.160	ENSAMEG00000007194	PTCD2	85	45.152	Ailuropoda_melanoleuca
ENSIPUG00000006080	ptcd2	89	51.734	ENSACIG00000002053	ptcd2	92	52.632	Amphilophus_citrinellus
ENSIPUG00000006080	ptcd2	99	56.658	ENSAOCG00000006616	ptcd2	94	56.676	Amphiprion_ocellaris
ENSIPUG00000006080	ptcd2	99	56.771	ENSAPEG00000022926	ptcd2	94	56.793	Amphiprion_percula
ENSIPUG00000006080	ptcd2	97	48.787	ENSACAG00000009747	PTCD2	91	48.732	Anolis_carolinensis
ENSIPUG00000006080	ptcd2	91	44.126	ENSANAG00000029353	PTCD2	84	44.343	Aotus_nancymaae
ENSIPUG00000006080	ptcd2	99	54.569	ENSACLG00000027742	ptcd2	92	55.278	Astatotilapia_calliptera
ENSIPUG00000006080	ptcd2	100	54.688	ENSAMXG00000029404	ptcd2	100	54.688	Astyanax_mexicanus
ENSIPUG00000006080	ptcd2	91	45.845	ENSBTAG00000014675	PTCD2	85	45.732	Bos_taurus
ENSIPUG00000006080	ptcd2	91	44.413	ENSCJAG00000016364	PTCD2	84	44.648	Callithrix_jacchus
ENSIPUG00000006080	ptcd2	94	45.455	ENSCAFG00000007982	PTCD2	80	46.491	Canis_familiaris
ENSIPUG00000006080	ptcd2	89	46.199	ENSCAFG00020019147	PTCD2	90	47.352	Canis_lupus_dingo
ENSIPUG00000006080	ptcd2	91	45.559	ENSCHIG00000017118	PTCD2	85	45.566	Capra_hircus
ENSIPUG00000006080	ptcd2	95	41.644	ENSCPOG00000040168	PTCD2	89	42.773	Cavia_porcellus
ENSIPUG00000006080	ptcd2	75	44.330	ENSCCAG00000021996	-	89	44.330	Cebus_capucinus
ENSIPUG00000006080	ptcd2	91	44.126	ENSCCAG00000029389	-	84	44.343	Cebus_capucinus
ENSIPUG00000006080	ptcd2	90	45.087	ENSCATG00000019069	PTCD2	85	45.062	Cercocebus_atys
ENSIPUG00000006080	ptcd2	90	43.966	ENSCLAG00000000072	PTCD2	85	43.865	Chinchilla_lanigera
ENSIPUG00000006080	ptcd2	90	45.376	ENSCSAG00000015623	PTCD2	85	45.370	Chlorocebus_sabaeus
ENSIPUG00000006080	ptcd2	92	45.634	ENSCPBG00000000216	PTCD2	88	45.322	Chrysemys_picta_bellii
ENSIPUG00000006080	ptcd2	90	45.376	ENSCANG00000035636	PTCD2	84	45.370	Colobus_angolensis_palliatus
ENSIPUG00000006080	ptcd2	91	45.845	ENSCGRG00001015289	Ptcd2	73	45.373	Cricetulus_griseus_chok1gshd
ENSIPUG00000006080	ptcd2	91	45.845	ENSCGRG00000006193	Ptcd2	73	45.373	Cricetulus_griseus_crigri
ENSIPUG00000006080	ptcd2	99	55.065	ENSCVAG00000001285	ptcd2	92	54.696	Cyprinodon_variegatus
ENSIPUG00000006080	ptcd2	98	53.476	ENSDARG00000035391	ptcd2	94	54.270	Danio_rerio
ENSIPUG00000006080	ptcd2	91	44.126	ENSDNOG00000008719	PTCD2	85	44.954	Dasypus_novemcinctus
ENSIPUG00000006080	ptcd2	90	46.243	ENSDORG00000004921	Ptcd2	86	45.783	Dipodomys_ordii
ENSIPUG00000006080	ptcd2	90	42.075	ENSETEG00000016542	PTCD2	83	42.991	Echinops_telfairi
ENSIPUG00000006080	ptcd2	91	45.584	ENSEASG00005018038	PTCD2	86	45.289	Equus_asinus_asinus
ENSIPUG00000006080	ptcd2	91	45.559	ENSECAG00000007022	PTCD2	84	45.260	Equus_caballus
ENSIPUG00000006080	ptcd2	89	46.199	ENSEEUG00000014031	PTCD2	84	45.846	Erinaceus_europaeus
ENSIPUG00000006080	ptcd2	99	56.842	ENSELUG00000003584	ptcd2	95	56.557	Esox_lucius
ENSIPUG00000006080	ptcd2	79	45.246	ENSFCAG00000045432	PTCD2	61	46.183	Felis_catus
ENSIPUG00000006080	ptcd2	79	43.831	ENSFALG00000010299	PTCD2	94	43.831	Ficedula_albicollis
ENSIPUG00000006080	ptcd2	95	44.110	ENSFDAG00000018461	PTCD2	91	43.840	Fukomys_damarensis
ENSIPUG00000006080	ptcd2	98	53.562	ENSGMOG00000003637	ptcd2	93	53.168	Gadus_morhua
ENSIPUG00000006080	ptcd2	87	41.194	ENSGALG00000038260	PTCD2	87	41.194	Gallus_gallus
ENSIPUG00000006080	ptcd2	93	49.860	ENSGAGG00000021952	PTCD2	87	49.853	Gopherus_agassizii
ENSIPUG00000006080	ptcd2	90	44.509	ENSGGOG00000010695	PTCD2	84	44.753	Gorilla_gorilla
ENSIPUG00000006080	ptcd2	99	55.091	ENSHBUG00000009191	ptcd2	92	55.833	Haplochromis_burtoni
ENSIPUG00000006080	ptcd2	95	44.658	ENSHGLG00000001234	PTCD2	89	44.737	Heterocephalus_glaber_female
ENSIPUG00000006080	ptcd2	95	44.658	ENSHGLG00100015419	PTCD2	89	44.737	Heterocephalus_glaber_male
ENSIPUG00000006080	ptcd2	94	56.749	ENSHCOG00000001703	ptcd2	95	56.098	Hippocampus_comes
ENSIPUG00000006080	ptcd2	91	44.729	ENSSTOG00000006596	PTCD2	86	44.681	Ictidomys_tridecemlineatus
ENSIPUG00000006080	ptcd2	96	43.478	ENSJJAG00000024388	Ptcd2	85	45.566	Jaculus_jaculus
ENSIPUG00000006080	ptcd2	91	52.857	ENSKMAG00000009329	ptcd2	85	52.778	Kryptolebias_marmoratus
ENSIPUG00000006080	ptcd2	99	54.450	ENSLBEG00000024871	ptcd2	91	55.710	Labrus_bergylta
ENSIPUG00000006080	ptcd2	99	54.688	ENSLOCG00000011122	ptcd2	93	55.402	Lepisosteus_oculatus
ENSIPUG00000006080	ptcd2	71	47.253	ENSLAFG00000004115	PTCD2	90	46.619	Loxodonta_africana
ENSIPUG00000006080	ptcd2	90	45.376	ENSMFAG00000031516	PTCD2	84	45.370	Macaca_fascicularis
ENSIPUG00000006080	ptcd2	96	43.935	ENSMNEG00000007537	PTCD2	91	43.840	Macaca_nemestrina
ENSIPUG00000006080	ptcd2	90	45.087	ENSMLEG00000031093	PTCD2	84	45.062	Mandrillus_leucophaeus
ENSIPUG00000006080	ptcd2	90	57.143	ENSMAMG00000018529	ptcd2	86	56.881	Mastacembelus_armatus
ENSIPUG00000006080	ptcd2	99	54.569	ENSMZEG00005003625	ptcd2	92	55.278	Maylandia_zebra
ENSIPUG00000006080	ptcd2	83	41.875	ENSMGAG00000005033	PTCD2	92	41.875	Meleagris_gallopavo
ENSIPUG00000006080	ptcd2	91	36.390	ENSMAUG00000020253	Ptcd2	83	35.780	Mesocricetus_auratus
ENSIPUG00000006080	ptcd2	91	44.286	ENSMICG00000004535	PTCD2	85	44.817	Microcebus_murinus
ENSIPUG00000006080	ptcd2	91	45.272	ENSMOCG00000019985	Ptcd2	88	44.776	Microtus_ochrogaster
ENSIPUG00000006080	ptcd2	91	46.875	ENSMODG00000001695	PTCD2	87	46.246	Monodelphis_domestica
ENSIPUG00000006080	ptcd2	99	55.875	ENSMALG00000022372	ptcd2	95	55.738	Monopterus_albus
ENSIPUG00000006080	ptcd2	91	46.132	MGP_CAROLIEiJ_G0018829	Ptcd2	88	45.970	Mus_caroli
ENSIPUG00000006080	ptcd2	91	45.272	ENSMUSG00000021650	Ptcd2	88	45.075	Mus_musculus
ENSIPUG00000006080	ptcd2	91	46.132	MGP_PahariEiJ_G0015904	Ptcd2	88	45.970	Mus_pahari
ENSIPUG00000006080	ptcd2	91	46.132	MGP_SPRETEiJ_G0019711	Ptcd2	88	45.970	Mus_spretus
ENSIPUG00000006080	ptcd2	91	45.272	ENSMPUG00000014401	PTCD2	85	46.341	Mustela_putorius_furo
ENSIPUG00000006080	ptcd2	90	44.798	ENSMLUG00000007374	PTCD2	82	45.000	Myotis_lucifugus
ENSIPUG00000006080	ptcd2	91	43.840	ENSNGAG00000005027	Ptcd2	85	44.648	Nannospalax_galili
ENSIPUG00000006080	ptcd2	99	54.569	ENSNBRG00000008174	ptcd2	93	55.278	Neolamprologus_brichardi
ENSIPUG00000006080	ptcd2	85	55.046	ENSNBRG00000000092	-	92	55.921	Neolamprologus_brichardi
ENSIPUG00000006080	ptcd2	90	43.931	ENSNLEG00000004516	PTCD2	84	44.444	Nomascus_leucogenys
ENSIPUG00000006080	ptcd2	78	40.134	ENSMEUG00000014012	-	77	38.435	Notamacropus_eugenii
ENSIPUG00000006080	ptcd2	91	43.840	ENSOPRG00000007290	PTCD2	84	44.648	Ochotona_princeps
ENSIPUG00000006080	ptcd2	91	46.705	ENSODEG00000016417	PTCD2	85	47.095	Octodon_degus
ENSIPUG00000006080	ptcd2	86	54.985	ENSONIG00000011269	ptcd2	96	54.985	Oreochromis_niloticus
ENSIPUG00000006080	ptcd2	91	44.699	ENSOCUG00000007970	PTCD2	86	44.242	Oryctolagus_cuniculus
ENSIPUG00000006080	ptcd2	90	56.232	ENSORLG00000003851	ptcd2	83	57.143	Oryzias_latipes
ENSIPUG00000006080	ptcd2	90	55.072	ENSORLG00020009823	ptcd2	84	55.901	Oryzias_latipes_hni
ENSIPUG00000006080	ptcd2	91	54.571	ENSORLG00015016777	ptcd2	92	55.352	Oryzias_latipes_hsok
ENSIPUG00000006080	ptcd2	99	52.116	ENSOMEG00000012396	ptcd2	85	52.676	Oryzias_melastigma
ENSIPUG00000006080	ptcd2	91	43.714	ENSOGAG00000008390	PTCD2	87	42.857	Otolemur_garnettii
ENSIPUG00000006080	ptcd2	91	45.845	ENSOARG00000005087	PTCD2	84	45.872	Ovis_aries
ENSIPUG00000006080	ptcd2	90	44.509	ENSPPAG00000028480	PTCD2	84	44.753	Pan_paniscus
ENSIPUG00000006080	ptcd2	90	44.220	ENSPTRG00000016968	PTCD2	84	44.444	Pan_troglodytes
ENSIPUG00000006080	ptcd2	89	45.455	ENSPANG00000006611	PTCD2	82	45.455	Papio_anubis
ENSIPUG00000006080	ptcd2	95	51.226	ENSPKIG00000019896	ptcd2	91	51.862	Paramormyrops_kingsleyae
ENSIPUG00000006080	ptcd2	82	50.633	ENSPSIG00000014559	PTCD2	98	50.633	Pelodiscus_sinensis
ENSIPUG00000006080	ptcd2	91	47.278	ENSPEMG00000000884	Ptcd2	85	47.401	Peromyscus_maniculatus_bairdii
ENSIPUG00000006080	ptcd2	97	44.355	ENSPCIG00000029047	PTCD2	92	43.944	Phascolarctos_cinereus
ENSIPUG00000006080	ptcd2	84	56.832	ENSPLAG00000010456	ptcd2	84	56.832	Poecilia_latipinna
ENSIPUG00000006080	ptcd2	84	58.385	ENSPREG00000021797	ptcd2	82	58.385	Poecilia_reticulata
ENSIPUG00000006080	ptcd2	90	38.728	ENSPPYG00000015543	PTCD2	81	38.580	Pongo_abelii
ENSIPUG00000006080	ptcd2	73	38.929	ENSPCAG00000006806	PTCD2	89	38.929	Procavia_capensis
ENSIPUG00000006080	ptcd2	93	43.889	ENSPVAG00000010935	PTCD2	86	44.311	Pteropus_vampyrus
ENSIPUG00000006080	ptcd2	99	54.308	ENSPNYG00000003122	ptcd2	92	55.000	Pundamilia_nyererei
ENSIPUG00000006080	ptcd2	99	69.634	ENSPNAG00000021490	ptcd2	99	69.634	Pygocentrus_nattereri
ENSIPUG00000006080	ptcd2	91	45.272	ENSRNOG00000028403	Ptcd2	88	44.776	Rattus_norvegicus
ENSIPUG00000006080	ptcd2	90	41.618	ENSRBIG00000032929	PTCD2	83	41.667	Rhinopithecus_bieti
ENSIPUG00000006080	ptcd2	90	45.376	ENSRROG00000000080	PTCD2	85	45.679	Rhinopithecus_roxellana
ENSIPUG00000006080	ptcd2	91	44.413	ENSSBOG00000018911	PTCD2	85	44.343	Saimiri_boliviensis_boliviensis
ENSIPUG00000006080	ptcd2	91	44.857	ENSSHAG00000003833	PTCD2	87	44.776	Sarcophilus_harrisii
ENSIPUG00000006080	ptcd2	86	51.205	ENSSFOG00015015415	ptcd2	92	49.435	Scleropages_formosus
ENSIPUG00000006080	ptcd2	99	52.094	ENSSMAG00000010350	ptcd2	95	51.639	Scophthalmus_maximus
ENSIPUG00000006080	ptcd2	90	61.808	ENSSDUG00000008142	ptcd2	82	61.774	Seriola_dumerili
ENSIPUG00000006080	ptcd2	90	61.516	ENSSLDG00000015284	ptcd2	86	61.774	Seriola_lalandi_dorsalis
ENSIPUG00000006080	ptcd2	52	47.475	ENSSARG00000004983	PTCD2	94	36.455	Sorex_araneus
ENSIPUG00000006080	ptcd2	86	45.181	ENSSPUG00000000176	PTCD2	84	45.181	Sphenodon_punctatus
ENSIPUG00000006080	ptcd2	99	54.331	ENSSPAG00000008591	ptcd2	94	54.768	Stegastes_partitus
ENSIPUG00000006080	ptcd2	91	45.845	ENSSSCG00000016975	PTCD2	76	46.440	Sus_scrofa
ENSIPUG00000006080	ptcd2	83	43.750	ENSTGUG00000005705	PTCD2	92	43.750	Taeniopygia_guttata
ENSIPUG00000006080	ptcd2	97	41.444	ENSTBEG00000016559	PTCD2	90	41.761	Tupaia_belangeri
ENSIPUG00000006080	ptcd2	91	45.845	ENSTTRG00000011851	PTCD2	84	45.872	Tursiops_truncatus
ENSIPUG00000006080	ptcd2	91	44.160	ENSUAMG00000007583	PTCD2	77	45.152	Ursus_americanus
ENSIPUG00000006080	ptcd2	91	44.160	ENSUMAG00000007666	PTCD2	86	45.152	Ursus_maritimus
ENSIPUG00000006080	ptcd2	91	43.553	ENSVPAG00000009597	PTCD2	86	42.687	Vicugna_pacos
ENSIPUG00000006080	ptcd2	90	45.665	ENSVVUG00000007299	-	85	46.769	Vulpes_vulpes
ENSIPUG00000006080	ptcd2	91	45.845	ENSXETG00000031652	PTCD2	84	46.250	Xenopus_tropicalis
ENSIPUG00000006080	ptcd2	94	53.591	ENSXMAG00000005940	ptcd2	76	57.453	Xiphophorus_maculatus