EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000006091 (Gene tree)
Gene ID: 108256191
Gene Symbol: RAB11A
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: RAB25%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 7502 bases
Position: chr23:18099060-18106561
Accession: 108256191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008950	MMR_HSR1	PF01926.23	6.2e-07	1	1
ENSIPUP00000008921	MMR_HSR1	PF01926.23	6.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000009310	-	654	-	ENSIPUP00000008921	217 (aa)	-	-
ENSIPUT00000009339	-	681	XM_017452799	ENSIPUP00000008950	216 (aa)	XP_017308288	W5U764

Gene Model

Click here to download ENSIPUG00000006091's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000006091	RAB11A	54	37.069	ENSIPUG00000018288	RAB20	60	35.526
ENSIPUG00000006091	RAB11A	93	31.731	ENSIPUG00000024531	rab34	80	31.731
ENSIPUG00000006091	RAB11A	74	45.625	ENSIPUG00000020226	RAB15	78	45.625
ENSIPUG00000006091	RAB11A	99	44.749	ENSIPUG00000007415	rab14	100	44.749
ENSIPUG00000006091	RAB11A	99	81.106	ENSIPUG00000025100	rab11b	99	81.106
ENSIPUG00000006091	RAB11A	95	39.904	ENSIPUG00000011376	rab42a	97	39.904
ENSIPUG00000006091	RAB11A	99	80.645	ENSIPUG00000019927	rab11bb	99	80.645
ENSIPUG00000006091	RAB11A	96	46.377	ENSIPUG00000020508	rab1ab	99	46.377
ENSIPUG00000006091	RAB11A	85	36.923	ENSIPUG00000014269	rab33a	84	36.923
ENSIPUG00000006091	RAB11A	88	35.079	ENSIPUG00000022394	zgc:101559	81	35.079
ENSIPUG00000006091	RAB11A	54	31.356	ENSIPUG00000020426	arl11	64	31.356
ENSIPUG00000006091	RAB11A	94	42.233	ENSIPUG00000020833	rab39b	96	42.233
ENSIPUG00000006091	RAB11A	94	42.233	ENSIPUG00000024203	rab39ba	96	42.233
ENSIPUG00000006091	RAB11A	92	48.241	ENSIPUG00000007539	rab2a	99	45.413
ENSIPUG00000006091	RAB11A	73	39.877	ENSIPUG00000017200	-	78	39.877
ENSIPUG00000006091	RAB11A	87	43.005	ENSIPUG00000024622	rab35	96	43.005
ENSIPUG00000006091	RAB11A	99	40.000	ENSIPUG00000020082	rab5c	97	40.000
ENSIPUG00000006091	RAB11A	75	38.415	ENSIPUG00000016561	rab9b	74	38.415
ENSIPUG00000006091	RAB11A	94	32.843	ENSIPUG00000021740	rab6a	94	32.843
ENSIPUG00000006091	RAB11A	74	48.750	ENSIPUG00000003199	rab13	80	48.750
ENSIPUG00000006091	RAB11A	66	31.724	ENSIPUG00000005254	RERG	70	31.724
ENSIPUG00000006091	RAB11A	75	34.161	ENSIPUG00000018098	rab6b	77	34.161
ENSIPUG00000006091	RAB11A	80	44.509	ENSIPUG00000021010	Rab30	86	44.509
ENSIPUG00000006091	RAB11A	71	34.615	ENSIPUG00000017447	rab34a	60	34.615
ENSIPUG00000006091	RAB11A	75	36.585	ENSIPUG00000016494	rab23	79	36.585
ENSIPUG00000006091	RAB11A	76	42.515	ENSIPUG00000012509	-	76	42.515
ENSIPUG00000006091	RAB11A	72	39.752	ENSIPUG00000014035	rab9a	79	39.752
ENSIPUG00000006091	RAB11A	93	31.343	ENSIPUG00000015058	rab6b	93	31.343
ENSIPUG00000006091	RAB11A	69	34.667	ENSIPUG00000006053	hras	85	35.802
ENSIPUG00000006091	RAB11A	94	40.686	ENSIPUG00000023392	rab5a	90	40.686
ENSIPUG00000006091	RAB11A	73	41.401	ENSIPUG00000010794	rab22a	80	41.401
ENSIPUG00000006091	RAB11A	76	43.030	ENSIPUG00000017401	rab12	81	39.698
ENSIPUG00000006091	RAB11A	75	44.512	ENSIPUG00000010859	rab18b	80	44.512
ENSIPUG00000006091	RAB11A	74	43.125	ENSIPUG00000019237	rab15	75	43.125
ENSIPUG00000006091	RAB11A	99	62.673	ENSIPUG00000006126	Rab25	99	62.673
ENSIPUG00000006091	RAB11A	70	34.194	ENSIPUG00000004259	kras	87	35.329
ENSIPUG00000006091	RAB11A	75	36.025	ENSIPUG00000019382	rab41	79	35.099
ENSIPUG00000006091	RAB11A	78	39.884	ENSIPUG00000022445	RAB7A	82	39.884
ENSIPUG00000006091	RAB11A	54	37.069	ENSIPUG00000000432	RAB20	60	35.526
ENSIPUG00000006091	RAB11A	81	34.659	ENSIPUG00000006702	rras	84	34.659
ENSIPUG00000006091	RAB11A	73	40.491	ENSIPUG00000007246	rab7a	79	40.491
ENSIPUG00000006091	RAB11A	95	45.972	ENSIPUG00000015525	-	96	45.972
ENSIPUG00000006091	RAB11A	94	40.594	ENSIPUG00000018050	RAB31	97	40.594
ENSIPUG00000006091	RAB11A	78	35.088	ENSIPUG00000009784	-	85	33.005
ENSIPUG00000006091	RAB11A	96	40.580	ENSIPUG00000011489	Rab35	99	40.580
ENSIPUG00000006091	RAB11A	69	34.667	ENSIPUG00000022502	hrasb	85	35.802
ENSIPUG00000006091	RAB11A	96	48.309	ENSIPUG00000017890	Rab1A	99	48.309
ENSIPUG00000006091	RAB11A	96	46.860	ENSIPUG00000008650	rab1a	99	46.860
ENSIPUG00000006091	RAB11A	76	40.361	ENSIPUG00000016261	RAB19	75	40.361
ENSIPUG00000006091	RAB11A	79	38.333	ENSIPUG00000017684	rab33b	76	38.333
ENSIPUG00000006091	RAB11A	84	30.601	ENSIPUG00000024568	rheb	95	30.601
ENSIPUG00000006091	RAB11A	75	31.214	ENSIPUG00000000761	zgc	68	31.214
ENSIPUG00000006091	RAB11A	96	65.217	ENSIPUG00000012218	RAB25	95	65.217
ENSIPUG00000006091	RAB11A	99	84.651	ENSIPUG00000021401	Rab11a	99	84.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006091	RAB11A	100	91.204	ENSAPOG00000008251	rab11al	100	91.204	Acanthochromis_polyacanthus
ENSIPUG00000006091	RAB11A	100	92.593	ENSACIG00000017403	rab11al	100	92.593	Amphilophus_citrinellus
ENSIPUG00000006091	RAB11A	100	92.130	ENSAOCG00000015678	rab11al	100	92.130	Amphiprion_ocellaris
ENSIPUG00000006091	RAB11A	100	92.130	ENSAPEG00000022135	rab11al	100	92.130	Amphiprion_percula
ENSIPUG00000006091	RAB11A	100	91.667	ENSATEG00000006156	rab11al	100	91.667	Anabas_testudineus
ENSIPUG00000006091	RAB11A	100	92.593	ENSACLG00000010268	rab11al	100	92.593	Astatotilapia_calliptera
ENSIPUG00000006091	RAB11A	94	88.670	ENSAMXG00000024632	rab11al	93	88.670	Astyanax_mexicanus
ENSIPUG00000006091	RAB11A	94	80.198	ENSCPBG00000025819	-	99	80.198	Chrysemys_picta_bellii
ENSIPUG00000006091	RAB11A	100	91.667	ENSCSEG00000011996	rab11al	100	91.667	Cynoglossus_semilaevis
ENSIPUG00000006091	RAB11A	100	91.204	ENSCVAG00000020016	rab11al	100	91.204	Cyprinodon_variegatus
ENSIPUG00000006091	RAB11A	100	94.444	ENSDARG00000014340	rab11al	100	94.444	Danio_rerio
ENSIPUG00000006091	RAB11A	100	92.593	ENSELUG00000012035	rab11al	100	92.593	Esox_lucius
ENSIPUG00000006091	RAB11A	99	80.930	ENSFALG00000002594	-	91	80.930	Ficedula_albicollis
ENSIPUG00000006091	RAB11A	96	92.271	ENSFHEG00000000832	rab11al	99	92.271	Fundulus_heteroclitus
ENSIPUG00000006091	RAB11A	94	90.099	ENSGMOG00000006450	rab11al	100	90.099	Gadus_morhua
ENSIPUG00000006091	RAB11A	99	79.070	ENSGALG00000037802	-	50	79.070	Gallus_gallus
ENSIPUG00000006091	RAB11A	100	90.741	ENSGAFG00000021725	rab11al	100	90.741	Gambusia_affinis
ENSIPUG00000006091	RAB11A	100	92.130	ENSGACG00000013259	rab11al	100	92.130	Gasterosteus_aculeatus
ENSIPUG00000006091	RAB11A	99	80.465	ENSGAGG00000020702	-	99	80.465	Gopherus_agassizii
ENSIPUG00000006091	RAB11A	100	92.593	ENSHBUG00000009333	rab11al	100	92.593	Haplochromis_burtoni
ENSIPUG00000006091	RAB11A	100	91.667	ENSHCOG00000000232	rab11al	100	91.667	Hippocampus_comes
ENSIPUG00000006091	RAB11A	100	88.889	ENSKMAG00000015516	rab11al	100	88.889	Kryptolebias_marmoratus
ENSIPUG00000006091	RAB11A	100	92.130	ENSLBEG00000016417	rab11al	100	92.130	Labrus_bergylta
ENSIPUG00000006091	RAB11A	99	80.465	ENSLACG00000011380	rab11al	99	80.465	Latimeria_chalumnae
ENSIPUG00000006091	RAB11A	100	92.130	ENSLOCG00000008865	rab11al	100	92.130	Lepisosteus_oculatus
ENSIPUG00000006091	RAB11A	100	93.519	ENSMAMG00000010278	rab11al	100	93.519	Mastacembelus_armatus
ENSIPUG00000006091	RAB11A	100	92.593	ENSMZEG00005017514	rab11al	100	92.593	Maylandia_zebra
ENSIPUG00000006091	RAB11A	75	87.654	ENSMGAG00000004720	-	96	87.654	Meleagris_gallopavo
ENSIPUG00000006091	RAB11A	81	94.318	ENSMMOG00000017117	rab11al	86	94.318	Mola_mola
ENSIPUG00000006091	RAB11A	100	92.130	ENSMALG00000004093	rab11al	100	92.130	Monopterus_albus
ENSIPUG00000006091	RAB11A	100	92.593	ENSNBRG00000005116	rab11al	100	92.593	Neolamprologus_brichardi
ENSIPUG00000006091	RAB11A	100	93.056	ENSONIG00000002281	rab11al	100	93.056	Oreochromis_niloticus
ENSIPUG00000006091	RAB11A	100	91.667	ENSORLG00000016126	rab11al	100	91.667	Oryzias_latipes
ENSIPUG00000006091	RAB11A	100	91.667	ENSORLG00020013747	rab11al	100	91.667	Oryzias_latipes_hni
ENSIPUG00000006091	RAB11A	100	91.667	ENSORLG00015019591	rab11al	100	91.667	Oryzias_latipes_hsok
ENSIPUG00000006091	RAB11A	100	91.204	ENSOMEG00000020271	rab11al	100	91.204	Oryzias_melastigma
ENSIPUG00000006091	RAB11A	100	90.741	ENSPKIG00000020893	rab11al	100	90.741	Paramormyrops_kingsleyae
ENSIPUG00000006091	RAB11A	99	80.000	ENSPSIG00000013143	-	99	80.000	Pelodiscus_sinensis
ENSIPUG00000006091	RAB11A	100	90.741	ENSPMGG00000004220	rab11al	100	90.741	Periophthalmus_magnuspinnatus
ENSIPUG00000006091	RAB11A	100	91.667	ENSPFOG00000011316	rab11al	100	91.667	Poecilia_formosa
ENSIPUG00000006091	RAB11A	100	91.667	ENSPLAG00000007986	rab11al	100	91.667	Poecilia_latipinna
ENSIPUG00000006091	RAB11A	100	91.667	ENSPMEG00000000804	rab11al	100	91.667	Poecilia_mexicana
ENSIPUG00000006091	RAB11A	100	91.667	ENSPREG00000017324	rab11al	100	91.667	Poecilia_reticulata
ENSIPUG00000006091	RAB11A	100	92.593	ENSPNYG00000018244	rab11al	100	92.593	Pundamilia_nyererei
ENSIPUG00000006091	RAB11A	100	96.759	ENSPNAG00000029085	rab11al	100	96.759	Pygocentrus_nattereri
ENSIPUG00000006091	RAB11A	100	92.130	ENSSFOG00015008618	rab11al	100	92.130	Scleropages_formosus
ENSIPUG00000006091	RAB11A	100	91.667	ENSSMAG00000016206	rab11al	100	91.667	Scophthalmus_maximus
ENSIPUG00000006091	RAB11A	100	93.056	ENSSDUG00000006278	rab11al	100	93.056	Seriola_dumerili
ENSIPUG00000006091	RAB11A	100	93.056	ENSSLDG00000012116	rab11al	100	93.056	Seriola_lalandi_dorsalis
ENSIPUG00000006091	RAB11A	99	78.241	ENSSPUG00000002526	-	99	78.241	Sphenodon_punctatus
ENSIPUG00000006091	RAB11A	100	91.667	ENSSPAG00000012044	rab11al	100	91.667	Stegastes_partitus
ENSIPUG00000006091	RAB11A	94	83.168	ENSTGUG00000003680	-	99	83.168	Taeniopygia_guttata
ENSIPUG00000006091	RAB11A	99	90.141	ENSTRUG00000007556	rab11al	99	90.141	Takifugu_rubripes
ENSIPUG00000006091	RAB11A	100	91.204	ENSXCOG00000004226	rab11al	100	91.204	Xiphophorus_couchianus
ENSIPUG00000006091	RAB11A	100	91.204	ENSXMAG00000027071	rab11al	100	91.204	Xiphophorus_maculatus