EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000006348 (Gene tree)
Gene ID: 108272342
Gene Symbol: gpatch4
Alias: im:7138553|si:dkey-202i12.4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7121 bases
Position: chr1:15197086-15204206
Accession: 108272342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000009342	G-patch	PF01585.23	2.7e-10	1	1
ENSIPUP00000009322	G-patch	PF01585.23	4.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000009729	-	3331	XM_017480699	ENSIPUP00000009322	402 (aa)	XP_017336188	A0A2D0S0B0
ENSIPUT00000009749	-	840	-	ENSIPUP00000009342	279 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000006348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006348	gpatch4	65	46.154	ENSG00000160818	GPATCH4	98	50.806	Homo_sapiens
ENSIPUG00000006348	gpatch4	66	69.268	ENSAPOG00000008436	gpatch4	52	78.641	Acanthochromis_polyacanthus
ENSIPUG00000006348	gpatch4	50	57.857	ENSACIG00000017309	-	91	67.568	Amphilophus_citrinellus
ENSIPUG00000006348	gpatch4	66	70.192	ENSAOCG00000015494	gpatch4	52	79.327	Amphiprion_ocellaris
ENSIPUG00000006348	gpatch4	66	70.673	ENSAPEG00000022243	gpatch4	53	79.808	Amphiprion_percula
ENSIPUG00000006348	gpatch4	76	63.404	ENSATEG00000006359	gpatch4	52	66.222	Anabas_testudineus
ENSIPUG00000006348	gpatch4	83	62.846	ENSACLG00000010456	gpatch4	51	86.905	Astatotilapia_calliptera
ENSIPUG00000006348	gpatch4	62	48.108	ENSCJAG00000006048	GPATCH4	91	50.847	Callithrix_jacchus
ENSIPUG00000006348	gpatch4	63	48.387	ENSCCAG00000036114	GPATCH4	91	50.847	Cebus_capucinus
ENSIPUG00000006348	gpatch4	65	45.641	ENSCATG00000042152	GPATCH4	78	50.847	Cercocebus_atys
ENSIPUG00000006348	gpatch4	65	57.868	ENSCPBG00000025803	GPATCH4	64	63.636	Chrysemys_picta_bellii
ENSIPUG00000006348	gpatch4	57	45.238	ENSCING00000004717	-	68	47.191	Ciona_intestinalis
ENSIPUG00000006348	gpatch4	55	41.718	ENSCSAVG00000003297	-	64	44.509	Ciona_savignyi
ENSIPUG00000006348	gpatch4	65	45.641	ENSCANG00000030031	GPATCH4	78	50.847	Colobus_angolensis_palliatus
ENSIPUG00000006348	gpatch4	82	46.356	ENSCSEG00000012030	gpatch4	64	55.204	Cynoglossus_semilaevis
ENSIPUG00000006348	gpatch4	68	67.143	ENSDARG00000091931	gpatch4	83	71.250	Danio_rerio
ENSIPUG00000006348	gpatch4	61	31.658	FBgn0039829	CG15561	53	36.041	Drosophila_melanogaster
ENSIPUG00000006348	gpatch4	54	32.948	ENSEBUG00000006498	-	55	38.372	Eptatretus_burgeri
ENSIPUG00000006348	gpatch4	64	47.668	ENSECAG00000011135	GPATCH4	54	48.980	Equus_caballus
ENSIPUG00000006348	gpatch4	63	47.059	ENSFCAG00000006554	GPATCH4	50	45.455	Felis_catus
ENSIPUG00000006348	gpatch4	81	61.694	ENSFHEG00000003097	gpatch4	54	76.329	Fundulus_heteroclitus
ENSIPUG00000006348	gpatch4	71	47.685	ENSGALG00000048365	GPATCH4	59	52.535	Gallus_gallus
ENSIPUG00000006348	gpatch4	83	58.400	ENSGAFG00000021732	gpatch4	66	72.683	Gambusia_affinis
ENSIPUG00000006348	gpatch4	83	51.754	ENSGACG00000013318	gpatch4	61	75.000	Gasterosteus_aculeatus
ENSIPUG00000006348	gpatch4	65	58.000	ENSGAGG00000020710	GPATCH4	65	64.824	Gopherus_agassizii
ENSIPUG00000006348	gpatch4	63	46.316	ENSGGOG00000000753	GPATCH4	78	50.847	Gorilla_gorilla
ENSIPUG00000006348	gpatch4	83	63.636	ENSHBUG00000009675	gpatch4	50	86.905	Haplochromis_burtoni
ENSIPUG00000006348	gpatch4	51	46.309	ENSHGLG00000011346	-	90	50.000	Heterocephalus_glaber_female
ENSIPUG00000006348	gpatch4	51	46.309	ENSHGLG00100018277	-	81	49.194	Heterocephalus_glaber_male
ENSIPUG00000006348	gpatch4	67	65.865	ENSHCOG00000007016	gpatch4	58	68.750	Hippocampus_comes
ENSIPUG00000006348	gpatch4	65	48.438	ENSSTOG00000020510	GPATCH4	89	53.226	Ictidomys_tridecemlineatus
ENSIPUG00000006348	gpatch4	69	67.593	ENSKMAG00000015765	gpatch4	57	74.419	Kryptolebias_marmoratus
ENSIPUG00000006348	gpatch4	83	61.390	ENSLBEG00000009364	-	78	67.308	Labrus_bergylta
ENSIPUG00000006348	gpatch4	71	66.222	ENSLBEG00000016296	gpatch4	50	73.778	Labrus_bergylta
ENSIPUG00000006348	gpatch4	66	57.426	ENSLACG00000009700	GPATCH4	58	64.039	Latimeria_chalumnae
ENSIPUG00000006348	gpatch4	71	52.466	ENSLOCG00000008820	gpatch4	62	58.036	Lepisosteus_oculatus
ENSIPUG00000006348	gpatch4	63	45.789	ENSMFAG00000030965	GPATCH4	78	50.847	Macaca_fascicularis
ENSIPUG00000006348	gpatch4	65	45.641	ENSMMUG00000002624	GPATCH4	78	50.847	Macaca_mulatta
ENSIPUG00000006348	gpatch4	63	45.789	ENSMNEG00000028844	GPATCH4	78	50.847	Macaca_nemestrina
ENSIPUG00000006348	gpatch4	63	44.737	ENSMLEG00000037909	GPATCH4	78	49.153	Mandrillus_leucophaeus
ENSIPUG00000006348	gpatch4	81	64.228	ENSMZEG00005017452	gpatch4	53	78.155	Maylandia_zebra
ENSIPUG00000006348	gpatch4	52	42.466	ENSMICG00000034025	-	93	44.068	Microcebus_murinus
ENSIPUG00000006348	gpatch4	62	46.277	ENSMICG00000013624	GPATCH4	62	39.167	Microcebus_murinus
ENSIPUG00000006348	gpatch4	80	62.551	ENSMMOG00000017095	gpatch4	76	86.585	Mola_mola
ENSIPUG00000006348	gpatch4	65	48.438	ENSMODG00000014154	-	92	51.010	Monodelphis_domestica
ENSIPUG00000006348	gpatch4	66	51.031	ENSMODG00000016818	-	67	51.485	Monodelphis_domestica
ENSIPUG00000006348	gpatch4	71	45.238	MGP_CAROLIEiJ_G0025152	Gpatch4	85	46.544	Mus_caroli
ENSIPUG00000006348	gpatch4	71	45.238	ENSMUSG00000028069	Gpatch4	85	46.544	Mus_musculus
ENSIPUG00000006348	gpatch4	71	45.238	MGP_PahariEiJ_G0026595	-	85	46.544	Mus_pahari
ENSIPUG00000006348	gpatch4	100	36.770	MGP_SPRETEiJ_G0026093	Gpatch4	85	46.544	Mus_spretus
ENSIPUG00000006348	gpatch4	66	43.878	ENSMEUG00000006861	-	68	45.455	Notamacropus_eugenii
ENSIPUG00000006348	gpatch4	66	71.845	ENSONIG00000002261	gpatch4	53	78.641	Oreochromis_niloticus
ENSIPUG00000006348	gpatch4	68	62.736	ENSORLG00020013892	gpatch4	58	71.292	Oryzias_latipes_hni
ENSIPUG00000006348	gpatch4	68	61.574	ENSORLG00015019725	gpatch4	60	69.444	Oryzias_latipes_hsok
ENSIPUG00000006348	gpatch4	69	51.031	ENSOMEG00000000529	gpatch4	81	81.579	Oryzias_melastigma
ENSIPUG00000006348	gpatch4	64	46.632	ENSOGAG00000006698	-	58	38.911	Otolemur_garnettii
ENSIPUG00000006348	gpatch4	63	46.316	ENSPPAG00000028364	-	78	50.847	Pan_paniscus
ENSIPUG00000006348	gpatch4	64	47.895	ENSPTIG00000006717	GPATCH4	84	50.000	Panthera_tigris_altaica
ENSIPUG00000006348	gpatch4	63	46.316	ENSPTRG00000001464	GPATCH4	78	50.847	Pan_troglodytes
ENSIPUG00000006348	gpatch4	63	45.789	ENSPANG00000018543	GPATCH4	78	50.847	Papio_anubis
ENSIPUG00000006348	gpatch4	68	57.426	ENSPSIG00000011317	GPATCH4	80	60.000	Pelodiscus_sinensis
ENSIPUG00000006348	gpatch4	63	52.261	ENSPMAG00000009175	gpatch4	67	58.376	Petromyzon_marinus
ENSIPUG00000006348	gpatch4	70	63.470	ENSPFOG00000011835	gpatch4	56	70.776	Poecilia_formosa
ENSIPUG00000006348	gpatch4	70	63.470	ENSPLAG00000019504	gpatch4	58	69.912	Poecilia_latipinna
ENSIPUG00000006348	gpatch4	70	63.470	ENSPMEG00000001375	gpatch4	57	70.776	Poecilia_mexicana
ENSIPUG00000006348	gpatch4	70	64.384	ENSPREG00000017029	gpatch4	59	70.776	Poecilia_reticulata
ENSIPUG00000006348	gpatch4	100	35.783	ENSPPYG00000000711	-	67	34.483	Pongo_abelii
ENSIPUG00000006348	gpatch4	83	63.241	ENSPNYG00000018461	gpatch4	53	78.641	Pundamilia_nyererei
ENSIPUG00000006348	gpatch4	71	45.238	ENSRNOG00000018969	Gpatch4	50	46.083	Rattus_norvegicus
ENSIPUG00000006348	gpatch4	65	45.641	ENSRBIG00000005742	GPATCH4	78	50.847	Rhinopithecus_bieti
ENSIPUG00000006348	gpatch4	65	45.641	ENSRROG00000044157	GPATCH4	78	50.847	Rhinopithecus_roxellana
ENSIPUG00000006348	gpatch4	65	49.215	ENSSBOG00000024840	GPATCH4	73	34.551	Saimiri_boliviensis_boliviensis
ENSIPUG00000006348	gpatch4	66	47.959	ENSSHAG00000015436	-	69	50.990	Sarcophilus_harrisii
ENSIPUG00000006348	gpatch4	65	68.932	ENSSDUG00000006583	gpatch4	52	75.120	Seriola_dumerili
ENSIPUG00000006348	gpatch4	65	68.932	ENSSLDG00000012365	gpatch4	52	75.120	Seriola_lalandi_dorsalis
ENSIPUG00000006348	gpatch4	65	56.853	ENSSPUG00000002674	GPATCH4	66	63.636	Sphenodon_punctatus
ENSIPUG00000006348	gpatch4	72	69.458	ENSSPAG00000011683	gpatch4	52	77.143	Stegastes_partitus
ENSIPUG00000006348	gpatch4	65	66.019	ENSTNIG00000005156	gpatch4	72	73.077	Tetraodon_nigroviridis
ENSIPUG00000006348	gpatch4	65	41.518	ENSVVUG00000006004	-	82	53.390	Vulpes_vulpes
ENSIPUG00000006348	gpatch4	69	58.962	ENSXETG00000020397	gpatch4	70	62.911	Xenopus_tropicalis
ENSIPUG00000006348	gpatch4	70	63.256	ENSXCOG00000003911	gpatch4	57	69.266	Xiphophorus_couchianus
ENSIPUG00000006348	gpatch4	70	63.470	ENSXMAG00000024520	gpatch4	54	74.038	Xiphophorus_maculatus