EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000006522 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1042 bases
Position: chr28:7733580-7734621
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000009524	RVT_1	PF00078.27	5.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000009943	-	1042	-	ENSIPUP00000009524	307 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000006522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000006522	-	60	31.551	ENSIPUG00000002371	-	72	31.551
ENSIPUG00000006522	-	65	30.392	ENSIPUG00000000759	-	94	30.392
ENSIPUG00000006522	-	100	81.230	ENSIPUG00000022680	-	70	81.230
ENSIPUG00000006522	-	66	30.583	ENSIPUG00000010429	-	80	30.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006522	-	79	32.099	ENSAPOG00000010356	-	61	32.099	Acanthochromis_polyacanthus
ENSIPUG00000006522	-	81	30.645	ENSAPEG00000017357	-	57	30.645	Amphiprion_percula
ENSIPUG00000006522	-	81	71.200	ENSAPEG00000001652	-	69	71.200	Amphiprion_percula
ENSIPUG00000006522	-	67	32.857	ENSAPEG00000010431	-	82	32.857	Amphiprion_percula
ENSIPUG00000006522	-	65	32.512	ENSAPEG00000002969	-	75	32.512	Amphiprion_percula
ENSIPUG00000006522	-	77	36.134	ENSATEG00000004181	-	74	36.134	Anabas_testudineus
ENSIPUG00000006522	-	86	66.792	ENSACLG00000021049	-	69	66.792	Astatotilapia_calliptera
ENSIPUG00000006522	-	100	66.667	ENSACLG00000000577	-	59	66.667	Astatotilapia_calliptera
ENSIPUG00000006522	-	95	34.576	ENSCSEG00000009301	-	72	34.576	Cynoglossus_semilaevis
ENSIPUG00000006522	-	95	34.576	ENSCSEG00000000334	-	61	34.576	Cynoglossus_semilaevis
ENSIPUG00000006522	-	64	31.500	ENSEBUG00000009057	-	96	31.500	Eptatretus_burgeri
ENSIPUG00000006522	-	62	32.474	ENSEBUG00000003807	-	71	32.979	Eptatretus_burgeri
ENSIPUG00000006522	-	100	72.816	ENSELUG00000023077	-	54	72.816	Esox_lucius
ENSIPUG00000006522	-	71	63.594	ENSHBUG00000016469	-	61	63.594	Haplochromis_burtoni
ENSIPUG00000006522	-	98	30.693	ENSHCOG00000002713	-	68	30.693	Hippocampus_comes
ENSIPUG00000006522	-	98	31.908	ENSLACG00000006699	-	55	31.908	Latimeria_chalumnae
ENSIPUG00000006522	-	55	39.181	ENSLACG00000009128	-	50	39.181	Latimeria_chalumnae
ENSIPUG00000006522	-	56	30.337	ENSLACG00000010217	-	87	30.337	Latimeria_chalumnae
ENSIPUG00000006522	-	97	33.223	ENSLACG00000010360	-	90	33.223	Latimeria_chalumnae
ENSIPUG00000006522	-	90	30.824	ENSLOCG00000008864	-	58	30.824	Lepisosteus_oculatus
ENSIPUG00000006522	-	82	72.222	ENSMZEG00005001407	-	72	72.222	Maylandia_zebra
ENSIPUG00000006522	-	92	69.474	ENSMZEG00005004417	-	78	69.474	Maylandia_zebra
ENSIPUG00000006522	-	57	74.138	ENSMZEG00005027054	-	61	74.138	Maylandia_zebra
ENSIPUG00000006522	-	93	30.573	ENSMODG00000028208	-	75	30.573	Monodelphis_domestica
ENSIPUG00000006522	-	94	68.836	ENSMALG00000007492	-	72	68.836	Monopterus_albus
ENSIPUG00000006522	-	81	32.685	ENSNBRG00000002521	-	67	32.685	Neolamprologus_brichardi
ENSIPUG00000006522	-	84	68.217	ENSORLG00000029682	-	75	68.217	Oryzias_latipes
ENSIPUG00000006522	-	89	67.273	ENSORLG00000015190	-	58	67.273	Oryzias_latipes
ENSIPUG00000006522	-	95	36.149	ENSORLG00000024322	-	61	36.149	Oryzias_latipes
ENSIPUG00000006522	-	95	35.135	ENSORLG00000027624	-	61	35.135	Oryzias_latipes
ENSIPUG00000006522	-	95	36.149	ENSORLG00000022572	-	61	36.149	Oryzias_latipes
ENSIPUG00000006522	-	100	65.372	ENSORLG00000028845	-	53	65.372	Oryzias_latipes
ENSIPUG00000006522	-	88	66.544	ENSORLG00020012943	-	76	66.544	Oryzias_latipes_hni
ENSIPUG00000006522	-	95	34.459	ENSORLG00015020118	-	69	34.459	Oryzias_latipes_hsok
ENSIPUG00000006522	-	95	36.824	ENSORLG00015012247	-	61	36.824	Oryzias_latipes_hsok
ENSIPUG00000006522	-	95	36.486	ENSORLG00015021074	-	61	36.486	Oryzias_latipes_hsok
ENSIPUG00000006522	-	95	36.149	ENSORLG00015010665	-	61	36.149	Oryzias_latipes_hsok
ENSIPUG00000006522	-	95	36.149	ENSORLG00015015659	-	61	36.149	Oryzias_latipes_hsok
ENSIPUG00000006522	-	67	67.150	ENSORLG00015001080	-	51	67.150	Oryzias_latipes_hsok
ENSIPUG00000006522	-	95	36.486	ENSORLG00015012611	-	70	36.486	Oryzias_latipes_hsok
ENSIPUG00000006522	-	100	57.605	ENSORLG00015014615	-	54	57.605	Oryzias_latipes_hsok
ENSIPUG00000006522	-	88	37.589	ENSORLG00015011564	-	56	37.589	Oryzias_latipes_hsok
ENSIPUG00000006522	-	100	63.754	ENSPKIG00000021701	-	65	63.754	Paramormyrops_kingsleyae
ENSIPUG00000006522	-	78	65.966	ENSPKIG00000022569	-	64	65.966	Paramormyrops_kingsleyae
ENSIPUG00000006522	-	80	32.103	ENSPSIG00000001099	-	66	32.103	Pelodiscus_sinensis
ENSIPUG00000006522	-	89	69.343	ENSPNYG00000007962	-	81	69.343	Pundamilia_nyererei
ENSIPUG00000006522	-	82	35.573	ENSPNAG00000009857	-	70	35.573	Pygocentrus_nattereri
ENSIPUG00000006522	-	79	35.102	ENSPNAG00000002794	-	60	35.102	Pygocentrus_nattereri
ENSIPUG00000006522	-	79	30.081	ENSPNAG00000024493	-	85	30.081	Pygocentrus_nattereri
ENSIPUG00000006522	-	74	35.242	ENSPNAG00000013035	-	74	35.242	Pygocentrus_nattereri
ENSIPUG00000006522	-	95	33.446	ENSPNAG00000018609	-	73	33.446	Pygocentrus_nattereri
ENSIPUG00000006522	-	83	66.797	ENSPNAG00000021600	-	82	66.797	Pygocentrus_nattereri
ENSIPUG00000006522	-	84	67.568	ENSSFOG00015012021	-	72	67.568	Scleropages_formosus
ENSIPUG00000006522	-	89	83.273	ENSSMAG00000002801	-	58	83.273	Scophthalmus_maximus
ENSIPUG00000006522	-	66	68.966	ENSXMAG00000028373	-	64	68.966	Xiphophorus_maculatus
ENSIPUG00000006522	-	84	69.767	ENSXMAG00000021563	-	82	69.767	Xiphophorus_maculatus