EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000006525 (Gene tree)
Gene ID: 108256194
Gene Symbol: rbm8a
Alias: fb34f03|wu:fb34f03|zgc:110525
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4474 bases
Position: chr23:18405277-18409750
Accession: 108256194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000009551	RRM_1	PF00076.22	3.2e-18	1	1
ENSIPUP00000009537	RRM_1	PF00076.22	3.9e-18	1	1
ENSIPUP00000009537	RRM_3	PF08777.11	5.3e-06	1	1
ENSIPUP00000009551	RRM_3	PF08777.11	8.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000009973	-	486	-	ENSIPUP00000009551	161 (aa)	-	-
ENSIPUT00000009957	-	1829	XM_017452805	ENSIPUP00000009537	194 (aa)	XP_017308294	-

Gene Model

Click here to download ENSIPUG00000006525's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG
ipu03015	mRNA surveillance pathway	KEGG
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000006525	rbm8a	52	31.325	ENSIPUG00000005537	-	64	30.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006525	rbm8a	78	92.053	ENSG00000265241	RBM8A	89	92.258	Homo_sapiens
ENSIPUG00000006525	rbm8a	81	93.671	ENSAPOG00000009727	rbm8a	89	94.194	Acanthochromis_polyacanthus
ENSIPUG00000006525	rbm8a	78	90.260	ENSAMEG00000017623	RBM8A	89	90.506	Ailuropoda_melanoleuca
ENSIPUG00000006525	rbm8a	82	93.125	ENSACIG00000017678	rbm8a	97	93.548	Amphilophus_citrinellus
ENSIPUG00000006525	rbm8a	82	93.711	ENSAOCG00000023887	rbm8a	75	94.231	Amphiprion_ocellaris
ENSIPUG00000006525	rbm8a	82	93.711	ENSAPEG00000022847	rbm8a	75	94.231	Amphiprion_percula
ENSIPUG00000006525	rbm8a	81	93.671	ENSATEG00000005630	rbm8a	89	94.194	Anabas_testudineus
ENSIPUG00000006525	rbm8a	78	92.053	ENSANAG00000004525	RBM8A	89	92.258	Aotus_nancymaae
ENSIPUG00000006525	rbm8a	81	92.405	ENSACLG00000009627	rbm8a	89	92.903	Astatotilapia_calliptera
ENSIPUG00000006525	rbm8a	78	93.377	ENSAMXG00000040754	rbm8a	89	93.548	Astyanax_mexicanus
ENSIPUG00000006525	rbm8a	73	52.448	WBGene00004387	rnp-4	83	58.678	Caenorhabditis_elegans
ENSIPUG00000006525	rbm8a	78	92.053	ENSCJAG00000046869	RBM8A	89	92.258	Callithrix_jacchus
ENSIPUG00000006525	rbm8a	78	92.053	ENSCAFG00000023172	RBM8A	89	92.258	Canis_familiaris
ENSIPUG00000006525	rbm8a	78	92.053	ENSCAFG00020019945	RBM8A	89	92.258	Canis_lupus_dingo
ENSIPUG00000006525	rbm8a	78	92.053	ENSCHIG00000012114	RBM8A	89	92.258	Capra_hircus
ENSIPUG00000006525	rbm8a	78	92.053	ENSTSYG00000028809	RBM8A	89	92.258	Carlito_syrichta
ENSIPUG00000006525	rbm8a	58	90.179	ENSCAPG00000014086	RBM8A	86	91.509	Cavia_aperea
ENSIPUG00000006525	rbm8a	81	91.772	ENSCPOG00000022453	RBM8A	92	92.258	Cavia_porcellus
ENSIPUG00000006525	rbm8a	78	92.053	ENSCCAG00000028589	-	89	92.258	Cebus_capucinus
ENSIPUG00000006525	rbm8a	78	91.391	ENSCCAG00000022460	-	89	91.613	Cebus_capucinus
ENSIPUG00000006525	rbm8a	78	92.053	ENSCATG00000021691	RBM8A	89	92.258	Cercocebus_atys
ENSIPUG00000006525	rbm8a	78	92.053	ENSCLAG00000000547	RBM8A	89	92.258	Chinchilla_lanigera
ENSIPUG00000006525	rbm8a	78	92.053	ENSCSAG00000001779	RBM8A	89	92.258	Chlorocebus_sabaeus
ENSIPUG00000006525	rbm8a	85	85.882	ENSCPBG00000007941	RBM8A	73	91.772	Chrysemys_picta_bellii
ENSIPUG00000006525	rbm8a	82	62.893	ENSCING00000004877	-	91	64.286	Ciona_intestinalis
ENSIPUG00000006525	rbm8a	80	65.385	ENSCSAVG00000005685	-	92	65.385	Ciona_savignyi
ENSIPUG00000006525	rbm8a	78	92.053	ENSCANG00000042182	RBM8A	89	92.258	Colobus_angolensis_palliatus
ENSIPUG00000006525	rbm8a	89	78.035	ENSCGRG00001003032	-	89	78.065	Cricetulus_griseus_chok1gshd
ENSIPUG00000006525	rbm8a	78	92.053	ENSCGRG00001002681	-	89	92.258	Cricetulus_griseus_chok1gshd
ENSIPUG00000006525	rbm8a	78	92.053	ENSCGRG00000006832	-	89	92.258	Cricetulus_griseus_crigri
ENSIPUG00000006525	rbm8a	81	93.038	ENSCSEG00000011865	rbm8a	89	93.548	Cynoglossus_semilaevis
ENSIPUG00000006525	rbm8a	81	91.772	ENSCVAG00000020734	rbm8a	88	92.258	Cyprinodon_variegatus
ENSIPUG00000006525	rbm8a	80	95.484	ENSDARG00000016516	rbm8a	89	95.484	Danio_rerio
ENSIPUG00000006525	rbm8a	78	92.053	ENSDORG00000027340	-	97	85.542	Dipodomys_ordii
ENSIPUG00000006525	rbm8a	85	63.095	FBgn0033378	tsu	93	64.968	Drosophila_melanogaster
ENSIPUG00000006525	rbm8a	80	77.419	ENSETEG00000017932	-	89	77.419	Echinops_telfairi
ENSIPUG00000006525	rbm8a	74	87.500	ENSETEG00000008411	-	82	87.500	Echinops_telfairi
ENSIPUG00000006525	rbm8a	80	82.051	ENSEBUG00000010386	rbm8a	89	81.935	Eptatretus_burgeri
ENSIPUG00000006525	rbm8a	78	92.053	ENSEASG00005007455	RBM8A	89	92.258	Equus_asinus_asinus
ENSIPUG00000006525	rbm8a	78	92.053	ENSECAG00000022024	RBM8A	89	92.258	Equus_caballus
ENSIPUG00000006525	rbm8a	58	86.486	ENSEEUG00000008823	RBM8A	89	63.871	Erinaceus_europaeus
ENSIPUG00000006525	rbm8a	80	94.839	ENSELUG00000012464	rbm8a	89	94.839	Esox_lucius
ENSIPUG00000006525	rbm8a	78	92.053	ENSFCAG00000033936	RBM8A	89	92.258	Felis_catus
ENSIPUG00000006525	rbm8a	78	92.053	ENSFDAG00000020821	RBM8A	89	92.258	Fukomys_damarensis
ENSIPUG00000006525	rbm8a	81	91.139	ENSFHEG00000013538	rbm8a	88	91.613	Fundulus_heteroclitus
ENSIPUG00000006525	rbm8a	72	93.525	ENSGMOG00000007353	rbm8a	87	93.525	Gadus_morhua
ENSIPUG00000006525	rbm8a	78	79.470	ENSGALG00000036283	RBM8A	88	80.000	Gallus_gallus
ENSIPUG00000006525	rbm8a	81	91.772	ENSGAFG00000021698	rbm8a	89	92.258	Gambusia_affinis
ENSIPUG00000006525	rbm8a	72	92.086	ENSGACG00000013157	rbm8a	87	92.647	Gasterosteus_aculeatus
ENSIPUG00000006525	rbm8a	78	92.715	ENSGAGG00000023769	RBM8A	89	92.903	Gopherus_agassizii
ENSIPUG00000006525	rbm8a	78	92.053	ENSGGOG00000037248	RBM8A	89	92.258	Gorilla_gorilla
ENSIPUG00000006525	rbm8a	82	92.500	ENSHBUG00000008827	rbm8a	97	92.903	Haplochromis_burtoni
ENSIPUG00000006525	rbm8a	78	92.053	ENSHGLG00000007303	RBM8A	89	92.258	Heterocephalus_glaber_female
ENSIPUG00000006525	rbm8a	78	92.053	ENSHGLG00100012468	RBM8A	89	92.258	Heterocephalus_glaber_male
ENSIPUG00000006525	rbm8a	80	92.308	ENSHCOG00000010122	rbm8a	88	92.258	Hippocampus_comes
ENSIPUG00000006525	rbm8a	78	92.053	ENSSTOG00000013917	RBM8A	89	92.258	Ictidomys_tridecemlineatus
ENSIPUG00000006525	rbm8a	78	92.053	ENSJJAG00000009488	-	89	92.258	Jaculus_jaculus
ENSIPUG00000006525	rbm8a	81	93.038	ENSKMAG00000014454	rbm8a	89	93.548	Kryptolebias_marmoratus
ENSIPUG00000006525	rbm8a	81	93.038	ENSLBEG00000015720	rbm8a	89	93.548	Labrus_bergylta
ENSIPUG00000006525	rbm8a	80	92.994	ENSLACG00000014365	RBM8A	89	92.994	Latimeria_chalumnae
ENSIPUG00000006525	rbm8a	90	96.552	ENSLOCG00000009082	rbm8a	100	96.552	Lepisosteus_oculatus
ENSIPUG00000006525	rbm8a	80	92.258	ENSLAFG00000021886	-	89	92.258	Loxodonta_africana
ENSIPUG00000006525	rbm8a	89	63.842	ENSLAFG00000011031	-	88	60.759	Loxodonta_africana
ENSIPUG00000006525	rbm8a	78	92.053	ENSMFAG00000045376	RBM8A	89	92.258	Macaca_fascicularis
ENSIPUG00000006525	rbm8a	82	87.425	ENSMMUG00000016051	RBM8A	97	87.654	Macaca_mulatta
ENSIPUG00000006525	rbm8a	78	92.053	ENSMNEG00000040422	RBM8A	89	92.258	Macaca_nemestrina
ENSIPUG00000006525	rbm8a	78	92.053	ENSMLEG00000039155	RBM8A	89	92.258	Mandrillus_leucophaeus
ENSIPUG00000006525	rbm8a	81	91.139	ENSMAMG00000010565	rbm8a	89	91.613	Mastacembelus_armatus
ENSIPUG00000006525	rbm8a	81	92.405	ENSMZEG00005016453	rbm8a	89	92.903	Maylandia_zebra
ENSIPUG00000006525	rbm8a	78	92.053	ENSMAUG00000016783	-	97	86.061	Mesocricetus_auratus
ENSIPUG00000006525	rbm8a	78	92.053	ENSMICG00000031698	-	89	92.258	Microcebus_murinus
ENSIPUG00000006525	rbm8a	82	72.500	ENSMICG00000037163	-	94	74.510	Microcebus_murinus
ENSIPUG00000006525	rbm8a	78	92.053	ENSMOCG00000017782	-	89	92.258	Microtus_ochrogaster
ENSIPUG00000006525	rbm8a	82	80.625	ENSMMOG00000017179	rbm8a	91	80.645	Mola_mola
ENSIPUG00000006525	rbm8a	78	91.391	ENSMODG00000018752	RBM8A	89	91.613	Monodelphis_domestica
ENSIPUG00000006525	rbm8a	81	90.506	ENSMALG00000010145	rbm8a	89	90.968	Monopterus_albus
ENSIPUG00000006525	rbm8a	78	89.404	MGP_CAROLIEiJ_G0014951	Rbm8a2	89	89.677	Mus_caroli
ENSIPUG00000006525	rbm8a	78	92.053	MGP_CAROLIEiJ_G0025383	Rbm8a	97	85.542	Mus_caroli
ENSIPUG00000006525	rbm8a	78	92.053	ENSMUSG00000038374	Rbm8a	97	85.542	Mus_musculus
ENSIPUG00000006525	rbm8a	78	90.066	ENSMUSG00000078184	Rbm8a2	89	90.323	Mus_musculus
ENSIPUG00000006525	rbm8a	78	92.053	MGP_PahariEiJ_G0026828	-	97	85.542	Mus_pahari
ENSIPUG00000006525	rbm8a	78	92.053	MGP_SPRETEiJ_G0026330	Rbm8a	97	85.542	Mus_spretus
ENSIPUG00000006525	rbm8a	78	92.053	ENSMPUG00000000775	RBM8A	89	92.258	Mustela_putorius_furo
ENSIPUG00000006525	rbm8a	78	92.053	ENSMLUG00000017436	-	89	92.258	Myotis_lucifugus
ENSIPUG00000006525	rbm8a	78	83.444	ENSMLUG00000022711	-	89	83.871	Myotis_lucifugus
ENSIPUG00000006525	rbm8a	80	92.258	ENSNGAG00000016038	-	89	92.258	Nannospalax_galili
ENSIPUG00000006525	rbm8a	81	92.405	ENSNBRG00000004541	rbm8a	89	92.903	Neolamprologus_brichardi
ENSIPUG00000006525	rbm8a	78	92.053	ENSNLEG00000029632	RBM8A	89	92.258	Nomascus_leucogenys
ENSIPUG00000006525	rbm8a	56	88.889	ENSMEUG00000016058	RBM8A	85	89.286	Notamacropus_eugenii
ENSIPUG00000006525	rbm8a	59	93.860	ENSOPRG00000013316	RBM8A	100	93.860	Ochotona_princeps
ENSIPUG00000006525	rbm8a	78	92.053	ENSODEG00000000114	-	89	92.258	Octodon_degus
ENSIPUG00000006525	rbm8a	78	78.808	ENSODEG00000008563	-	89	79.355	Octodon_degus
ENSIPUG00000006525	rbm8a	78	77.483	ENSODEG00000002094	-	88	78.065	Octodon_degus
ENSIPUG00000006525	rbm8a	81	92.405	ENSONIG00000008608	rbm8a	89	92.903	Oreochromis_niloticus
ENSIPUG00000006525	rbm8a	78	90.260	ENSOCUG00000025693	RBM8A	89	90.506	Oryctolagus_cuniculus
ENSIPUG00000006525	rbm8a	81	91.772	ENSORLG00000016263	rbm8a	89	92.258	Oryzias_latipes
ENSIPUG00000006525	rbm8a	85	90.909	ENSORLG00020012904	rbm8a	85	91.250	Oryzias_latipes_hni
ENSIPUG00000006525	rbm8a	81	91.772	ENSORLG00015018824	rbm8a	89	92.258	Oryzias_latipes_hsok
ENSIPUG00000006525	rbm8a	91	85.876	ENSOMEG00000021533	rbm8a	76	86.207	Oryzias_melastigma
ENSIPUG00000006525	rbm8a	78	90.260	ENSOGAG00000000202	RBM8A	89	90.506	Otolemur_garnettii
ENSIPUG00000006525	rbm8a	78	91.391	ENSOARG00000020634	RBM8A	89	91.613	Ovis_aries
ENSIPUG00000006525	rbm8a	78	92.053	ENSPPAG00000029116	RBM8A	89	92.258	Pan_paniscus
ENSIPUG00000006525	rbm8a	78	92.053	ENSPPRG00000008243	RBM8A	89	92.258	Panthera_pardus
ENSIPUG00000006525	rbm8a	78	92.053	ENSPTIG00000009472	RBM8A	89	92.258	Panthera_tigris_altaica
ENSIPUG00000006525	rbm8a	78	92.053	ENSPTRG00000001201	RBM8A	89	92.258	Pan_troglodytes
ENSIPUG00000006525	rbm8a	78	92.053	ENSPANG00000020584	RBM8A	89	92.258	Papio_anubis
ENSIPUG00000006525	rbm8a	80	92.258	ENSPKIG00000020558	rbm8a	89	92.258	Paramormyrops_kingsleyae
ENSIPUG00000006525	rbm8a	82	91.875	ENSPKIG00000009551	rbm8a	67	92.405	Paramormyrops_kingsleyae
ENSIPUG00000006525	rbm8a	81	94.304	ENSPMGG00000010122	rbm8a	89	94.839	Periophthalmus_magnuspinnatus
ENSIPUG00000006525	rbm8a	78	92.053	ENSPEMG00000018117	-	89	92.258	Peromyscus_maniculatus_bairdii
ENSIPUG00000006525	rbm8a	78	91.391	ENSPCIG00000011931	RBM8A	89	91.613	Phascolarctos_cinereus
ENSIPUG00000006525	rbm8a	81	92.405	ENSPFOG00000010695	rbm8a	89	92.903	Poecilia_formosa
ENSIPUG00000006525	rbm8a	81	92.405	ENSPLAG00000009183	rbm8a	89	92.903	Poecilia_latipinna
ENSIPUG00000006525	rbm8a	81	92.405	ENSPMEG00000013950	rbm8a	89	92.903	Poecilia_mexicana
ENSIPUG00000006525	rbm8a	82	91.875	ENSPREG00000017572	rbm8a	97	92.258	Poecilia_reticulata
ENSIPUG00000006525	rbm8a	78	92.053	ENSPPYG00000000929	RBM8A	89	92.258	Pongo_abelii
ENSIPUG00000006525	rbm8a	80	91.613	ENSPCAG00000002146	-	89	91.613	Procavia_capensis
ENSIPUG00000006525	rbm8a	78	92.053	ENSPCOG00000022886	RBM8A	89	92.258	Propithecus_coquereli
ENSIPUG00000006525	rbm8a	78	92.053	ENSPVAG00000014471	RBM8A	89	92.258	Pteropus_vampyrus
ENSIPUG00000006525	rbm8a	81	92.405	ENSPNYG00000013564	rbm8a	89	92.903	Pundamilia_nyererei
ENSIPUG00000006525	rbm8a	80	94.839	ENSPNAG00000028502	rbm8a	89	94.839	Pygocentrus_nattereri
ENSIPUG00000006525	rbm8a	78	92.053	ENSRNOG00000021215	Rbm8a	89	92.258	Rattus_norvegicus
ENSIPUG00000006525	rbm8a	78	92.053	ENSRBIG00000039233	RBM8A	89	92.258	Rhinopithecus_bieti
ENSIPUG00000006525	rbm8a	78	92.053	ENSRROG00000040324	-	89	92.258	Rhinopithecus_roxellana
ENSIPUG00000006525	rbm8a	78	86.755	ENSRROG00000033023	-	89	86.452	Rhinopithecus_roxellana
ENSIPUG00000006525	rbm8a	78	92.053	ENSSBOG00000031316	RBM8A	89	92.258	Saimiri_boliviensis_boliviensis
ENSIPUG00000006525	rbm8a	78	91.391	ENSSHAG00000018629	RBM8A	89	91.613	Sarcophilus_harrisii
ENSIPUG00000006525	rbm8a	80	92.903	ENSSFOG00015024171	rbm8a	89	92.903	Scleropages_formosus
ENSIPUG00000006525	rbm8a	80	95.484	ENSSFOG00015009007	rbm8a	89	95.484	Scleropages_formosus
ENSIPUG00000006525	rbm8a	81	93.038	ENSSMAG00000012998	rbm8a	89	93.548	Scophthalmus_maximus
ENSIPUG00000006525	rbm8a	81	93.671	ENSSDUG00000005911	rbm8a	89	94.194	Seriola_dumerili
ENSIPUG00000006525	rbm8a	81	93.671	ENSSLDG00000011664	rbm8a	89	94.194	Seriola_lalandi_dorsalis
ENSIPUG00000006525	rbm8a	78	92.053	ENSSARG00000013289	RBM8A	89	92.258	Sorex_araneus
ENSIPUG00000006525	rbm8a	78	93.377	ENSSPUG00000001576	RBM8A	89	93.548	Sphenodon_punctatus
ENSIPUG00000006525	rbm8a	81	93.671	ENSSPAG00000012181	rbm8a	89	94.194	Stegastes_partitus
ENSIPUG00000006525	rbm8a	78	92.053	ENSSSCG00000028509	RBM8A	89	92.258	Sus_scrofa
ENSIPUG00000006525	rbm8a	78	91.391	ENSTGUG00000004447	RBM8A	89	91.613	Taeniopygia_guttata
ENSIPUG00000006525	rbm8a	81	91.139	ENSTRUG00000013173	rbm8a	88	91.613	Takifugu_rubripes
ENSIPUG00000006525	rbm8a	81	91.139	ENSTNIG00000006869	rbm8a	89	91.613	Tetraodon_nigroviridis
ENSIPUG00000006525	rbm8a	59	93.860	ENSTBEG00000014947	RBM8A	100	93.860	Tupaia_belangeri
ENSIPUG00000006525	rbm8a	66	90.625	ENSTTRG00000009081	RBM8A	87	90.909	Tursiops_truncatus
ENSIPUG00000006525	rbm8a	78	92.053	ENSUAMG00000021929	RBM8A	89	92.258	Ursus_americanus
ENSIPUG00000006525	rbm8a	78	92.053	ENSUMAG00000010298	RBM8A	89	92.258	Ursus_maritimus
ENSIPUG00000006525	rbm8a	78	92.053	ENSVVUG00000007486	RBM8A	89	92.258	Vulpes_vulpes
ENSIPUG00000006525	rbm8a	81	91.772	ENSXCOG00000004369	rbm8a	89	92.258	Xiphophorus_couchianus
ENSIPUG00000006525	rbm8a	81	91.772	ENSXMAG00000013463	rbm8a	97	90.968	Xiphophorus_maculatus