EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000006602 (Gene tree)
Gene ID: 100304754
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 18311 bases
Position: chr16:25847270-25865580
Accession: 100304754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000009665	ResIII	PF04851.15	1.3e-09	1	1
ENSIPUP00000009693	ResIII	PF04851.15	5.2e-09	1	1
ENSIPUP00000009693	DEAD	PF00270.29	2.9e-40	1	1
ENSIPUP00000009665	DEAD	PF00270.29	3.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010119	-	1572	-	ENSIPUP00000009693	523 (aa)	-	-
ENSIPUT00000010090	-	5852	XM_017488545	ENSIPUP00000009665	570 (aa)	XP_017344034	A0A2D0SMU9

Gene Model

Click here to download ENSIPUG00000006602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000006602	ddx56	72	30.952	ENSIPUG00000000616	ddx6	76	30.952
ENSIPUG00000006602	ddx56	71	32.181	ENSIPUG00000012876	ddx18	62	31.551
ENSIPUG00000006602	ddx56	73	31.234	ENSIPUG00000008367	-	75	31.250
ENSIPUG00000006602	ddx56	73	31.328	ENSIPUG00000014551	ddx55	62	31.328
ENSIPUG00000006602	ddx56	75	30.370	ENSIPUG00000008623	ddx52	62	30.370
ENSIPUG00000006602	ddx56	73	33.333	ENSIPUG00000023788	ddx47	77	33.333
ENSIPUG00000006602	ddx56	73	30.729	ENSIPUG00000012823	DDX6	75	30.729

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006602	ddx56	97	61.939	ENSG00000136271	DDX56	99	65.027	Homo_sapiens
ENSIPUG00000006602	ddx56	97	77.758	ENSAPOG00000017113	ddx56	99	77.580	Acanthochromis_polyacanthus
ENSIPUG00000006602	ddx56	97	61.622	ENSAMEG00000017711	DDX56	98	61.622	Ailuropoda_melanoleuca
ENSIPUG00000006602	ddx56	94	64.935	ENSACIG00000013747	ddx56	99	74.863	Amphilophus_citrinellus
ENSIPUG00000006602	ddx56	86	79.346	ENSAOCG00000015447	-	94	75.382	Amphiprion_ocellaris
ENSIPUG00000006602	ddx56	88	78.884	ENSAOCG00000018059	ddx56	94	78.685	Amphiprion_ocellaris
ENSIPUG00000006602	ddx56	97	76.868	ENSAPEG00000007267	ddx56	99	76.335	Amphiprion_percula
ENSIPUG00000006602	ddx56	97	76.703	ENSATEG00000005279	ddx56	99	76.523	Anabas_testudineus
ENSIPUG00000006602	ddx56	98	74.552	ENSACLG00000020113	ddx56	99	74.552	Astatotilapia_calliptera
ENSIPUG00000006602	ddx56	97	80.505	ENSAMXG00000019357	ddx56	99	80.505	Astyanax_mexicanus
ENSIPUG00000006602	ddx56	96	63.043	ENSBTAG00000010602	DDX56	97	63.406	Bos_taurus
ENSIPUG00000006602	ddx56	96	38.462	WBGene00016073	C24H12.4	87	38.462	Caenorhabditis_elegans
ENSIPUG00000006602	ddx56	98	61.593	ENSCJAG00000012233	DDX56	99	61.593	Callithrix_jacchus
ENSIPUG00000006602	ddx56	80	59.519	ENSCAFG00000029295	DDX56	98	59.300	Canis_familiaris
ENSIPUG00000006602	ddx56	97	60.721	ENSCAFG00020019695	DDX56	98	60.878	Canis_lupus_dingo
ENSIPUG00000006602	ddx56	96	62.862	ENSCHIG00000014261	DDX56	97	63.225	Capra_hircus
ENSIPUG00000006602	ddx56	96	60.962	ENSTSYG00000008048	DDX56	98	62.523	Carlito_syrichta
ENSIPUG00000006602	ddx56	83	61.684	ENSCAPG00000006286	DDX56	97	61.506	Cavia_aperea
ENSIPUG00000006602	ddx56	96	63.024	ENSCPOG00000003359	DDX56	97	62.862	Cavia_porcellus
ENSIPUG00000006602	ddx56	98	61.101	ENSCCAG00000025303	DDX56	99	61.170	Cebus_capucinus
ENSIPUG00000006602	ddx56	97	61.802	ENSCATG00000039389	DDX56	98	61.850	Cercocebus_atys
ENSIPUG00000006602	ddx56	97	62.050	ENSCLAG00000007666	DDX56	98	62.050	Chinchilla_lanigera
ENSIPUG00000006602	ddx56	97	62.118	ENSCSAG00000015636	DDX56	98	62.118	Chlorocebus_sabaeus
ENSIPUG00000006602	ddx56	98	65.841	ENSCPBG00000024556	DDX56	99	65.310	Chrysemys_picta_bellii
ENSIPUG00000006602	ddx56	88	60.314	ENSCING00000005185	-	98	59.921	Ciona_intestinalis
ENSIPUG00000006602	ddx56	90	57.170	ENSCSAVG00000011266	-	98	58.367	Ciona_savignyi
ENSIPUG00000006602	ddx56	98	61.525	ENSCANG00000028187	DDX56	99	61.525	Colobus_angolensis_palliatus
ENSIPUG00000006602	ddx56	97	63.063	ENSCGRG00001019019	Ddx56	99	62.633	Cricetulus_griseus_chok1gshd
ENSIPUG00000006602	ddx56	97	63.063	ENSCGRG00000011870	Ddx56	99	62.633	Cricetulus_griseus_crigri
ENSIPUG00000006602	ddx56	98	75.000	ENSCSEG00000008368	ddx56	100	74.823	Cynoglossus_semilaevis
ENSIPUG00000006602	ddx56	96	76.364	ENSCVAG00000006499	ddx56	99	74.865	Cyprinodon_variegatus
ENSIPUG00000006602	ddx56	98	78.853	ENSDARG00000020913	ddx56	99	78.853	Danio_rerio
ENSIPUG00000006602	ddx56	84	61.123	ENSDNOG00000036526	DDX56	97	61.123	Dasypus_novemcinctus
ENSIPUG00000006602	ddx56	98	48.421	FBgn0001565	Hlc	99	48.246	Drosophila_melanogaster
ENSIPUG00000006602	ddx56	87	41.505	ENSETEG00000019559	-	100	41.822	Echinops_telfairi
ENSIPUG00000006602	ddx56	63	72.222	ENSETEG00000002969	-	64	72.222	Echinops_telfairi
ENSIPUG00000006602	ddx56	96	62.432	ENSEBUG00000009986	ddx56	99	62.250	Eptatretus_burgeri
ENSIPUG00000006602	ddx56	96	60.187	ENSEASG00005017795	DDX56	98	62.342	Equus_asinus_asinus
ENSIPUG00000006602	ddx56	96	60.694	ENSECAG00000019897	DDX56	98	62.342	Equus_caballus
ENSIPUG00000006602	ddx56	85	60.619	ENSEEUG00000004849	DDX56	99	60.619	Erinaceus_europaeus
ENSIPUG00000006602	ddx56	96	79.121	ENSELUG00000004150	ddx56	97	79.121	Esox_lucius
ENSIPUG00000006602	ddx56	96	61.232	ENSFCAG00000010261	DDX56	97	61.594	Felis_catus
ENSIPUG00000006602	ddx56	97	61.982	ENSFDAG00000007128	DDX56	98	62.342	Fukomys_damarensis
ENSIPUG00000006602	ddx56	98	73.070	ENSFHEG00000018008	ddx56	96	77.689	Fundulus_heteroclitus
ENSIPUG00000006602	ddx56	98	69.838	ENSGAFG00000006906	ddx56	99	69.838	Gambusia_affinis
ENSIPUG00000006602	ddx56	93	66.865	ENSGAGG00000006789	DDX56	92	67.619	Gopherus_agassizii
ENSIPUG00000006602	ddx56	97	61.939	ENSGGOG00000012031	DDX56	98	61.939	Gorilla_gorilla
ENSIPUG00000006602	ddx56	94	69.776	ENSHBUG00000015246	ddx56	96	69.776	Haplochromis_burtoni
ENSIPUG00000006602	ddx56	97	61.622	ENSHGLG00000017271	DDX56	98	61.441	Heterocephalus_glaber_female
ENSIPUG00000006602	ddx56	97	61.622	ENSHGLG00100015731	DDX56	98	61.441	Heterocephalus_glaber_male
ENSIPUG00000006602	ddx56	97	73.153	ENSHCOG00000001685	ddx56	99	72.143	Hippocampus_comes
ENSIPUG00000006602	ddx56	96	62.025	ENSSTOG00000000464	DDX56	97	62.025	Ictidomys_tridecemlineatus
ENSIPUG00000006602	ddx56	95	62.387	ENSJJAG00000014269	Ddx56	99	62.387	Jaculus_jaculus
ENSIPUG00000006602	ddx56	97	74.101	ENSKMAG00000016611	ddx56	99	75.577	Kryptolebias_marmoratus
ENSIPUG00000006602	ddx56	96	76.642	ENSLBEG00000026281	ddx56	98	77.007	Labrus_bergylta
ENSIPUG00000006602	ddx56	97	69.620	ENSLACG00000015551	DDX56	96	70.886	Latimeria_chalumnae
ENSIPUG00000006602	ddx56	97	77.477	ENSLOCG00000015185	ddx56	99	76.964	Lepisosteus_oculatus
ENSIPUG00000006602	ddx56	95	62.409	ENSLAFG00000018206	DDX56	99	61.538	Loxodonta_africana
ENSIPUG00000006602	ddx56	97	61.802	ENSMFAG00000041001	DDX56	98	61.802	Macaca_fascicularis
ENSIPUG00000006602	ddx56	97	61.982	ENSMMUG00000002645	DDX56	98	61.982	Macaca_mulatta
ENSIPUG00000006602	ddx56	97	61.802	ENSMNEG00000028492	DDX56	98	61.802	Macaca_nemestrina
ENSIPUG00000006602	ddx56	97	61.982	ENSMLEG00000043591	DDX56	98	61.982	Mandrillus_leucophaeus
ENSIPUG00000006602	ddx56	97	76.029	ENSMAMG00000007776	ddx56	98	76.577	Mastacembelus_armatus
ENSIPUG00000006602	ddx56	98	74.552	ENSMZEG00005009813	ddx56	99	74.552	Maylandia_zebra
ENSIPUG00000006602	ddx56	98	62.278	ENSMICG00000005550	DDX56	99	62.278	Microcebus_murinus
ENSIPUG00000006602	ddx56	98	61.566	ENSMOCG00000016782	Ddx56	99	61.744	Microtus_ochrogaster
ENSIPUG00000006602	ddx56	88	79.084	ENSMMOG00000009654	ddx56	95	79.084	Mola_mola
ENSIPUG00000006602	ddx56	97	57.554	ENSMODG00000016137	DDX56	97	57.554	Monodelphis_domestica
ENSIPUG00000006602	ddx56	68	69.589	ENSMALG00000016910	ddx56	99	70.207	Monopterus_albus
ENSIPUG00000006602	ddx56	98	61.388	MGP_CAROLIEiJ_G0016069	Ddx56	99	64.542	Mus_caroli
ENSIPUG00000006602	ddx56	98	61.388	ENSMUSG00000004393	Ddx56	99	64.542	Mus_musculus
ENSIPUG00000006602	ddx56	98	61.388	MGP_PahariEiJ_G0016822	Ddx56	99	64.400	Mus_pahari
ENSIPUG00000006602	ddx56	98	61.388	MGP_SPRETEiJ_G0016911	Ddx56	99	64.542	Mus_spretus
ENSIPUG00000006602	ddx56	96	61.775	ENSMPUG00000018196	DDX56	86	61.775	Mustela_putorius_furo
ENSIPUG00000006602	ddx56	96	61.775	ENSMLUG00000003509	DDX56	97	62.319	Myotis_lucifugus
ENSIPUG00000006602	ddx56	98	62.167	ENSNGAG00000018785	Ddx56	99	62.167	Nannospalax_galili
ENSIPUG00000006602	ddx56	93	75.770	ENSNBRG00000002656	ddx56	93	73.964	Neolamprologus_brichardi
ENSIPUG00000006602	ddx56	97	62.298	ENSNLEG00000003816	DDX56	98	62.298	Nomascus_leucogenys
ENSIPUG00000006602	ddx56	91	57.490	ENSMEUG00000006788	DDX56	99	59.722	Notamacropus_eugenii
ENSIPUG00000006602	ddx56	97	61.261	ENSOPRG00000000292	-	98	61.174	Ochotona_princeps
ENSIPUG00000006602	ddx56	66	65.013	ENSODEG00000014807	DDX56	99	65.013	Octodon_degus
ENSIPUG00000006602	ddx56	98	73.118	ENSONIG00000011509	ddx56	99	72.401	Oreochromis_niloticus
ENSIPUG00000006602	ddx56	94	55.083	ENSOANG00000006320	-	98	53.606	Ornithorhynchus_anatinus
ENSIPUG00000006602	ddx56	71	56.250	ENSOANG00000015987	-	93	56.404	Ornithorhynchus_anatinus
ENSIPUG00000006602	ddx56	97	60.777	ENSOCUG00000022918	DDX56	99	61.250	Oryctolagus_cuniculus
ENSIPUG00000006602	ddx56	96	75.224	ENSORLG00000001434	ddx56	99	74.686	Oryzias_latipes
ENSIPUG00000006602	ddx56	96	74.865	ENSORLG00020015718	ddx56	96	74.327	Oryzias_latipes_hni
ENSIPUG00000006602	ddx56	96	75.224	ENSORLG00015003004	ddx56	95	74.686	Oryzias_latipes_hsok
ENSIPUG00000006602	ddx56	96	75.045	ENSOMEG00000022072	ddx56	99	74.506	Oryzias_melastigma
ENSIPUG00000006602	ddx56	97	61.622	ENSOGAG00000009981	DDX56	98	61.982	Otolemur_garnettii
ENSIPUG00000006602	ddx56	96	63.225	ENSOARG00000015240	DDX56	97	63.834	Ovis_aries
ENSIPUG00000006602	ddx56	97	59.894	ENSPPAG00000029147	DDX56	98	59.894	Pan_paniscus
ENSIPUG00000006602	ddx56	96	51.978	ENSPPAG00000031263	-	97	51.810	Pan_paniscus
ENSIPUG00000006602	ddx56	96	61.775	ENSPPRG00000014594	DDX56	97	61.775	Panthera_pardus
ENSIPUG00000006602	ddx56	93	54.409	ENSPTIG00000019500	DDX56	89	59.579	Panthera_tigris_altaica
ENSIPUG00000006602	ddx56	97	61.939	ENSPTRG00000019147	DDX56	98	61.939	Pan_troglodytes
ENSIPUG00000006602	ddx56	92	50.929	ENSPTRG00000052765	-	99	52.295	Pan_troglodytes
ENSIPUG00000006602	ddx56	97	61.802	ENSPANG00000002446	DDX56	98	61.802	Papio_anubis
ENSIPUG00000006602	ddx56	97	76.630	ENSPKIG00000018998	ddx56	98	76.449	Paramormyrops_kingsleyae
ENSIPUG00000006602	ddx56	94	75.000	ENSPMGG00000017421	ddx56	99	74.813	Periophthalmus_magnuspinnatus
ENSIPUG00000006602	ddx56	96	64.663	ENSPCIG00000009336	DDX56	96	64.663	Phascolarctos_cinereus
ENSIPUG00000006602	ddx56	98	75.404	ENSPFOG00000018658	ddx56	99	75.224	Poecilia_formosa
ENSIPUG00000006602	ddx56	98	75.404	ENSPLAG00000019208	ddx56	99	75.224	Poecilia_latipinna
ENSIPUG00000006602	ddx56	98	75.404	ENSPMEG00000001775	ddx56	99	75.224	Poecilia_mexicana
ENSIPUG00000006602	ddx56	98	76.302	ENSPREG00000015142	ddx56	99	75.045	Poecilia_reticulata
ENSIPUG00000006602	ddx56	97	62.298	ENSPPYG00000017591	DDX56	98	62.298	Pongo_abelii
ENSIPUG00000006602	ddx56	95	61.974	ENSPCAG00000011499	DDX56	99	61.974	Procavia_capensis
ENSIPUG00000006602	ddx56	97	62.342	ENSPCOG00000024864	DDX56	98	62.342	Propithecus_coquereli
ENSIPUG00000006602	ddx56	84	68.116	ENSPVAG00000000791	DDX56	85	68.116	Pteropus_vampyrus
ENSIPUG00000006602	ddx56	98	74.373	ENSPNYG00000019212	ddx56	99	74.373	Pundamilia_nyererei
ENSIPUG00000006602	ddx56	97	83.394	ENSPNAG00000025446	ddx56	99	83.032	Pygocentrus_nattereri
ENSIPUG00000006602	ddx56	98	61.566	ENSRNOG00000004670	Ddx56	99	61.210	Rattus_norvegicus
ENSIPUG00000006602	ddx56	97	61.939	ENSRBIG00000030140	DDX56	98	61.939	Rhinopithecus_bieti
ENSIPUG00000006602	ddx56	96	61.913	ENSRROG00000044428	DDX56	97	61.913	Rhinopithecus_roxellana
ENSIPUG00000006602	ddx56	95	44.369	YLR276C	-	97	44.710	Saccharomyces_cerevisiae
ENSIPUG00000006602	ddx56	98	61.593	ENSSBOG00000034339	DDX56	99	61.593	Saimiri_boliviensis_boliviensis
ENSIPUG00000006602	ddx56	85	63.169	ENSSHAG00000016615	DDX56	99	63.169	Sarcophilus_harrisii
ENSIPUG00000006602	ddx56	98	76.429	ENSSFOG00015012795	ddx56	99	76.071	Scleropages_formosus
ENSIPUG00000006602	ddx56	98	75.492	ENSSMAG00000011280	ddx56	99	76.580	Scophthalmus_maximus
ENSIPUG00000006602	ddx56	96	77.858	ENSSDUG00000023597	ddx56	98	78.221	Seriola_dumerili
ENSIPUG00000006602	ddx56	96	77.677	ENSSLDG00000018369	ddx56	98	78.040	Seriola_lalandi_dorsalis
ENSIPUG00000006602	ddx56	72	75.439	ENSSARG00000014363	DDX56	76	72.059	Sorex_araneus
ENSIPUG00000006602	ddx56	98	67.021	ENSSPUG00000000784	DDX56	97	66.135	Sphenodon_punctatus
ENSIPUG00000006602	ddx56	94	78.399	ENSSPAG00000009392	ddx56	99	78.212	Stegastes_partitus
ENSIPUG00000006602	ddx56	96	61.957	ENSSSCG00000016745	DDX56	98	62.500	Sus_scrofa
ENSIPUG00000006602	ddx56	97	75.812	ENSTRUG00000018623	ddx56	98	75.451	Takifugu_rubripes
ENSIPUG00000006602	ddx56	97	74.468	ENSTNIG00000013593	ddx56	99	74.291	Tetraodon_nigroviridis
ENSIPUG00000006602	ddx56	97	62.007	ENSTBEG00000007119	DDX56	99	62.007	Tupaia_belangeri
ENSIPUG00000006602	ddx56	83	61.263	ENSTTRG00000010552	DDX56	96	61.684	Tursiops_truncatus
ENSIPUG00000006602	ddx56	97	61.802	ENSUAMG00000014194	DDX56	98	61.802	Ursus_americanus
ENSIPUG00000006602	ddx56	97	61.802	ENSUMAG00000009666	DDX56	98	61.802	Ursus_maritimus
ENSIPUG00000006602	ddx56	97	61.081	ENSVVUG00000011905	DDX56	98	60.901	Vulpes_vulpes
ENSIPUG00000006602	ddx56	97	68.223	ENSXETG00000019000	ddx56	99	68.288	Xenopus_tropicalis
ENSIPUG00000006602	ddx56	97	73.796	ENSXCOG00000017413	ddx56	99	73.796	Xiphophorus_couchianus
ENSIPUG00000006602	ddx56	98	75.943	ENSXMAG00000018749	ddx56	99	74.865	Xiphophorus_maculatus