EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000006685 (Gene tree)
Gene ID: 108279159
Gene Symbol: setx
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 16977 bases
Position: chr18:1708828-1725804
Accession: 108279159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000009836	SEN1_N	PF12726.7	5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010269	-	6999	XM_017493164	ENSIPUP00000009836	2332 (aa)	XP_017348653	A0A2D0T146

Gene Model

Click here to download ENSIPUG00000006685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006685	setx	85	45.008	ENSG00000107290	SETX	79	44.778	Homo_sapiens
ENSIPUG00000006685	setx	99	50.333	ENSAMXG00000014406	-	99	50.268	Astyanax_mexicanus
ENSIPUG00000006685	setx	77	45.410	ENSCJAG00000018245	SETX	65	46.768	Callithrix_jacchus
ENSIPUG00000006685	setx	78	43.720	ENSCPOG00000001492	SETX	52	44.670	Cavia_porcellus
ENSIPUG00000006685	setx	77	41.013	ENSCLAG00000012582	SETX	59	50.000	Chinchilla_lanigera
ENSIPUG00000006685	setx	59	46.581	ENSETEG00000008111	-	53	46.581	Echinops_telfairi
ENSIPUG00000006685	setx	76	44.620	ENSECAG00000012019	SETX	69	46.338	Equus_caballus
ENSIPUG00000006685	setx	97	39.974	ENSELUG00000022536	-	92	39.518	Esox_lucius
ENSIPUG00000006685	setx	77	46.154	ENSFCAG00000007102	SETX	67	46.154	Felis_catus
ENSIPUG00000006685	setx	75	45.124	ENSFALG00000001464	SETX	72	45.124	Ficedula_albicollis
ENSIPUG00000006685	setx	85	42.881	ENSGGOG00000027664	SETX	77	46.747	Gorilla_gorilla
ENSIPUG00000006685	setx	88	48.203	ENSLOCG00000004264	SETX	84	48.203	Lepisosteus_oculatus
ENSIPUG00000006685	setx	74	46.069	ENSMOCG00000000848	Setx	67	46.069	Microtus_ochrogaster
ENSIPUG00000006685	setx	77	44.608	ENSNLEG00000012839	SETX	69	44.608	Nomascus_leucogenys
ENSIPUG00000006685	setx	74	45.438	ENSOCUG00000005616	SETX	50	45.438	Oryctolagus_cuniculus
ENSIPUG00000006685	setx	78	44.790	ENSOGAG00000013387	SETX	64	52.174	Otolemur_garnettii
ENSIPUG00000006685	setx	77	44.918	ENSPPAG00000004108	SETX	77	46.596	Pan_paniscus
ENSIPUG00000006685	setx	77	46.330	ENSPPRG00000012867	SETX	67	46.330	Panthera_pardus
ENSIPUG00000006685	setx	77	46.330	ENSPTIG00000021101	SETX	67	46.330	Panthera_tigris_altaica
ENSIPUG00000006685	setx	77	44.918	ENSPTRG00000021495	SETX	77	46.596	Pan_troglodytes
ENSIPUG00000006685	setx	99	41.535	ENSPKIG00000025162	SETX	96	40.850	Paramormyrops_kingsleyae
ENSIPUG00000006685	setx	90	41.749	ENSSPUG00000016332	SETX	74	47.429	Sphenodon_punctatus
ENSIPUG00000006685	setx	83	50.000	ENSSSCG00000005724	SETX	50	50.000	Sus_scrofa
ENSIPUG00000006685	setx	76	45.634	ENSTGUG00000005117	SETX	84	45.634	Taeniopygia_guttata
ENSIPUG00000006685	setx	85	41.318	ENSXETG00000006254	setx	83	41.318	Xenopus_tropicalis