EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000006716 (Gene tree)
Gene ID: 108271285
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 11365 bases
Position: chr10:21056319-21067683
Accession: 108271285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000009786	R3H	PF01424.22	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010219	-	3329	XM_017478758	ENSIPUP00000009786	254 (aa)	XP_017334247	A0A2D0RUR8

Gene Model

Click here to download ENSIPUG00000006716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006716	r3hdm4	91	56.723	ENSG00000198858	R3HDM4	90	57.589	Homo_sapiens
ENSIPUG00000006716	r3hdm4	91	57.143	ENSAMEG00000003001	R3HDM4	97	57.143	Ailuropoda_melanoleuca
ENSIPUG00000006716	r3hdm4	100	68.992	ENSACIG00000004672	r3hdm4	100	68.992	Amphilophus_citrinellus
ENSIPUG00000006716	r3hdm4	98	70.866	ENSATEG00000015913	r3hdm4	99	70.866	Anabas_testudineus
ENSIPUG00000006716	r3hdm4	91	57.563	ENSANAG00000029748	R3HDM4	98	57.563	Aotus_nancymaae
ENSIPUG00000006716	r3hdm4	91	56.723	ENSBTAG00000046406	R3HDM4	88	56.723	Bos_taurus
ENSIPUG00000006716	r3hdm4	92	56.855	ENSCJAG00000020114	R3HDM4	92	56.855	Callithrix_jacchus
ENSIPUG00000006716	r3hdm4	91	55.882	ENSCAFG00000019665	R3HDM4	87	55.882	Canis_familiaris
ENSIPUG00000006716	r3hdm4	91	55.462	ENSCAFG00020016880	R3HDM4	87	55.462	Canis_lupus_dingo
ENSIPUG00000006716	r3hdm4	91	56.303	ENSCHIG00000020110	R3HDM4	91	56.303	Capra_hircus
ENSIPUG00000006716	r3hdm4	91	57.143	ENSCCAG00000019955	R3HDM4	86	57.143	Cebus_capucinus
ENSIPUG00000006716	r3hdm4	91	56.904	ENSCATG00000037269	R3HDM4	89	56.904	Cercocebus_atys
ENSIPUG00000006716	r3hdm4	91	53.782	ENSCLAG00000007094	R3HDM4	97	53.782	Chinchilla_lanigera
ENSIPUG00000006716	r3hdm4	91	56.723	ENSCSAG00000012574	R3HDM4	88	56.723	Chlorocebus_sabaeus
ENSIPUG00000006716	r3hdm4	100	57.414	ENSCPBG00000009805	R3HDM4	100	57.414	Chrysemys_picta_bellii
ENSIPUG00000006716	r3hdm4	91	56.723	ENSCANG00000040439	R3HDM4	83	56.723	Colobus_angolensis_palliatus
ENSIPUG00000006716	r3hdm4	91	54.430	ENSCGRG00001021650	R3hdm4	89	54.661	Cricetulus_griseus_chok1gshd
ENSIPUG00000006716	r3hdm4	91	54.430	ENSCGRG00000013169	R3hdm4	89	54.661	Cricetulus_griseus_crigri
ENSIPUG00000006716	r3hdm4	100	66.667	ENSCSEG00000018211	r3hdm4	100	66.667	Cynoglossus_semilaevis
ENSIPUG00000006716	r3hdm4	100	70.155	ENSCVAG00000017127	r3hdm4	100	70.155	Cyprinodon_variegatus
ENSIPUG00000006716	r3hdm4	90	54.852	ENSDORG00000006605	R3hdm4	96	54.852	Dipodomys_ordii
ENSIPUG00000006716	r3hdm4	91	55.882	ENSEASG00005021556	R3HDM4	86	55.882	Equus_asinus_asinus
ENSIPUG00000006716	r3hdm4	91	55.882	ENSECAG00000000003	R3HDM4	87	55.882	Equus_caballus
ENSIPUG00000006716	r3hdm4	91	56.303	ENSFCAG00000042437	R3HDM4	88	56.303	Felis_catus
ENSIPUG00000006716	r3hdm4	93	59.917	ENSFALG00000013938	R3HDM4	100	59.917	Ficedula_albicollis
ENSIPUG00000006716	r3hdm4	91	54.393	ENSFDAG00000017040	R3HDM4	97	54.393	Fukomys_damarensis
ENSIPUG00000006716	r3hdm4	100	68.992	ENSFHEG00000017636	r3hdm4	100	68.992	Fundulus_heteroclitus
ENSIPUG00000006716	r3hdm4	94	63.525	ENSGMOG00000001231	r3hdm4	100	63.525	Gadus_morhua
ENSIPUG00000006716	r3hdm4	100	56.654	ENSGALG00000001998	R3HDM4	100	56.654	Gallus_gallus
ENSIPUG00000006716	r3hdm4	100	69.380	ENSGAFG00000004173	r3hdm4	100	69.380	Gambusia_affinis
ENSIPUG00000006716	r3hdm4	100	57.795	ENSGAGG00000019698	R3HDM4	100	57.795	Gopherus_agassizii
ENSIPUG00000006716	r3hdm4	91	56.118	ENSGGOG00000008040	R3HDM4	97	56.118	Gorilla_gorilla
ENSIPUG00000006716	r3hdm4	100	70.155	ENSHBUG00000014810	r3hdm4	100	70.155	Haplochromis_burtoni
ENSIPUG00000006716	r3hdm4	91	53.165	ENSHGLG00000016194	R3HDM4	88	53.165	Heterocephalus_glaber_female
ENSIPUG00000006716	r3hdm4	99	66.279	ENSHCOG00000008422	r3hdm4	99	66.279	Hippocampus_comes
ENSIPUG00000006716	r3hdm4	91	53.165	ENSSTOG00000023015	R3HDM4	97	54.008	Ictidomys_tridecemlineatus
ENSIPUG00000006716	r3hdm4	90	54.894	ENSJJAG00000012475	R3hdm4	89	54.894	Jaculus_jaculus
ENSIPUG00000006716	r3hdm4	100	69.767	ENSKMAG00000005853	r3hdm4	100	69.767	Kryptolebias_marmoratus
ENSIPUG00000006716	r3hdm4	100	70.543	ENSLBEG00000000730	r3hdm4	100	70.543	Labrus_bergylta
ENSIPUG00000006716	r3hdm4	100	61.004	ENSLACG00000016445	R3HDM4	100	61.004	Latimeria_chalumnae
ENSIPUG00000006716	r3hdm4	100	68.199	ENSLOCG00000002423	r3hdm4	100	68.582	Lepisosteus_oculatus
ENSIPUG00000006716	r3hdm4	91	55.696	ENSLAFG00000017796	R3HDM4	91	55.696	Loxodonta_africana
ENSIPUG00000006716	r3hdm4	91	57.143	ENSMFAG00000044131	R3HDM4	88	57.143	Macaca_fascicularis
ENSIPUG00000006716	r3hdm4	85	58.036	ENSMMUG00000009682	R3HDM4	90	58.036	Macaca_mulatta
ENSIPUG00000006716	r3hdm4	91	57.143	ENSMNEG00000044115	R3HDM4	96	57.143	Macaca_nemestrina
ENSIPUG00000006716	r3hdm4	90	57.203	ENSMLEG00000035693	R3HDM4	87	57.203	Mandrillus_leucophaeus
ENSIPUG00000006716	r3hdm4	87	69.778	ENSMAMG00000005652	r3hdm4	91	69.778	Mastacembelus_armatus
ENSIPUG00000006716	r3hdm4	91	54.008	ENSMAUG00000010611	R3hdm4	91	54.237	Mesocricetus_auratus
ENSIPUG00000006716	r3hdm4	91	56.303	ENSMICG00000010124	R3HDM4	88	56.303	Microcebus_murinus
ENSIPUG00000006716	r3hdm4	91	53.617	ENSMOCG00000002646	R3hdm4	89	54.701	Microtus_ochrogaster
ENSIPUG00000006716	r3hdm4	100	68.992	ENSMMOG00000008253	r3hdm4	100	68.992	Mola_mola
ENSIPUG00000006716	r3hdm4	89	58.696	ENSMODG00000005698	R3HDM4	99	58.696	Monodelphis_domestica
ENSIPUG00000006716	r3hdm4	100	68.359	ENSMALG00000018856	r3hdm4	100	68.359	Monopterus_albus
ENSIPUG00000006716	r3hdm4	91	52.340	MGP_CAROLIEiJ_G0015551	R3hdm4	89	53.390	Mus_caroli
ENSIPUG00000006716	r3hdm4	90	53.219	ENSMUSG00000035781	R3hdm4	89	54.274	Mus_musculus
ENSIPUG00000006716	r3hdm4	91	52.340	MGP_PahariEiJ_G0030964	R3hdm4	89	53.390	Mus_pahari
ENSIPUG00000006716	r3hdm4	91	52.743	MGP_SPRETEiJ_G0016369	-	75	53.782	Mus_spretus
ENSIPUG00000006716	r3hdm4	92	56.612	ENSMPUG00000009394	R3HDM4	90	56.612	Mustela_putorius_furo
ENSIPUG00000006716	r3hdm4	100	69.767	ENSNBRG00000004438	r3hdm4	100	69.767	Neolamprologus_brichardi
ENSIPUG00000006716	r3hdm4	86	53.913	ENSNLEG00000001022	R3HDM4	99	53.913	Nomascus_leucogenys
ENSIPUG00000006716	r3hdm4	91	58.475	ENSMEUG00000011020	R3HDM4	99	58.475	Notamacropus_eugenii
ENSIPUG00000006716	r3hdm4	91	53.782	ENSODEG00000011745	R3HDM4	88	53.782	Octodon_degus
ENSIPUG00000006716	r3hdm4	100	69.767	ENSONIG00000012675	r3hdm4	92	69.767	Oreochromis_niloticus
ENSIPUG00000006716	r3hdm4	100	68.992	ENSOMEG00000003005	r3hdm4	100	68.992	Oryzias_melastigma
ENSIPUG00000006716	r3hdm4	90	55.085	ENSOGAG00000025656	R3HDM4	89	55.085	Otolemur_garnettii
ENSIPUG00000006716	r3hdm4	91	56.303	ENSOARG00000009945	R3HDM4	97	56.303	Ovis_aries
ENSIPUG00000006716	r3hdm4	91	56.723	ENSPPAG00000042371	R3HDM4	97	56.723	Pan_paniscus
ENSIPUG00000006716	r3hdm4	91	57.143	ENSPANG00000015203	R3HDM4	88	57.143	Papio_anubis
ENSIPUG00000006716	r3hdm4	100	67.050	ENSPKIG00000007421	r3hdm4	100	67.050	Paramormyrops_kingsleyae
ENSIPUG00000006716	r3hdm4	100	60.465	ENSPMGG00000020467	r3hdm4	100	60.465	Periophthalmus_magnuspinnatus
ENSIPUG00000006716	r3hdm4	90	55.932	ENSPEMG00000008365	Tmem259	97	55.932	Peromyscus_maniculatus_bairdii
ENSIPUG00000006716	r3hdm4	100	67.442	ENSPFOG00000003199	r3hdm4	100	67.442	Poecilia_formosa
ENSIPUG00000006716	r3hdm4	100	67.442	ENSPMEG00000014183	r3hdm4	100	67.442	Poecilia_mexicana
ENSIPUG00000006716	r3hdm4	100	67.442	ENSPREG00000010709	r3hdm4	100	67.442	Poecilia_reticulata
ENSIPUG00000006716	r3hdm4	91	56.962	ENSPPYG00000009297	R3HDM4	88	56.962	Pongo_abelii
ENSIPUG00000006716	r3hdm4	57	56.291	ENSPCAG00000010997	R3HDM4	55	56.291	Procavia_capensis
ENSIPUG00000006716	r3hdm4	91	57.143	ENSPCOG00000016785	R3HDM4	88	57.143	Propithecus_coquereli
ENSIPUG00000006716	r3hdm4	100	70.155	ENSPNYG00000017489	r3hdm4	100	70.155	Pundamilia_nyererei
ENSIPUG00000006716	r3hdm4	91	53.191	ENSRNOG00000011489	R3hdm4	89	54.274	Rattus_norvegicus
ENSIPUG00000006716	r3hdm4	91	57.143	ENSRROG00000028842	R3HDM4	88	57.143	Rhinopithecus_roxellana
ENSIPUG00000006716	r3hdm4	91	54.132	ENSSBOG00000019298	R3HDM4	70	55.372	Saimiri_boliviensis_boliviensis
ENSIPUG00000006716	r3hdm4	56	59.184	ENSSHAG00000003036	-	100	59.184	Sarcophilus_harrisii
ENSIPUG00000006716	r3hdm4	96	72.065	ENSSFOG00015020574	r3hdm4	93	71.429	Scleropages_formosus
ENSIPUG00000006716	r3hdm4	100	68.605	ENSSMAG00000021090	r3hdm4	74	68.605	Scophthalmus_maximus
ENSIPUG00000006716	r3hdm4	100	70.543	ENSSDUG00000008488	r3hdm4	100	70.543	Seriola_dumerili
ENSIPUG00000006716	r3hdm4	100	70.543	ENSSLDG00000025328	r3hdm4	100	70.543	Seriola_lalandi_dorsalis
ENSIPUG00000006716	r3hdm4	93	59.751	ENSSPUG00000005434	R3HDM4	95	59.751	Sphenodon_punctatus
ENSIPUG00000006716	r3hdm4	99	70.312	ENSSPAG00000002562	r3hdm4	99	70.312	Stegastes_partitus
ENSIPUG00000006716	r3hdm4	91	55.882	ENSSSCG00000013419	R3HDM4	87	55.882	Sus_scrofa
ENSIPUG00000006716	r3hdm4	78	51.456	ENSTGUG00000000663	R3HDM4	98	51.942	Taeniopygia_guttata
ENSIPUG00000006716	r3hdm4	91	57.082	ENSTTRG00000001470	R3HDM4	97	58.298	Tursiops_truncatus
ENSIPUG00000006716	r3hdm4	91	53.390	ENSUAMG00000005751	R3HDM4	100	57.848	Ursus_americanus
ENSIPUG00000006716	r3hdm4	91	55.882	ENSVVUG00000022685	R3HDM4	87	55.882	Vulpes_vulpes
ENSIPUG00000006716	r3hdm4	99	45.882	ENSXETG00000033624	R3HDM4	99	45.882	Xenopus_tropicalis
ENSIPUG00000006716	r3hdm4	100	67.568	ENSXCOG00000005127	r3hdm4	100	67.568	Xiphophorus_couchianus
ENSIPUG00000006716	r3hdm4	100	67.829	ENSXMAG00000022875	r3hdm4	100	67.829	Xiphophorus_maculatus