EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000006751 (Gene tree)
Gene ID: 108258152
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5294 bases
Position: chr25:6461470-6466763
Accession: 108258152
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000009863	HAT	PF02184.16	8e-32	1	2
ENSIPUP00000009863	HAT	PF02184.16	8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010298	-	2169	XM_017456597	ENSIPUP00000009863	722 (aa)	XP_017312086	-

Gene Model

Click here to download ENSIPUG00000006751's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006751's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000006751	crnkl1	92	83.886	ENSIPUG00000006836	-	95	84.592
ENSIPUG00000006751	crnkl1	86	77.706	ENSIPUG00000000315	-	97	77.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006751	crnkl1	93	84.925	ENSG00000101343	CRNKL1	94	86.595	Homo_sapiens
ENSIPUG00000006751	crnkl1	98	84.908	ENSAPOG00000009705	crnkl1	94	89.831	Acanthochromis_polyacanthus
ENSIPUG00000006751	crnkl1	93	85.970	ENSAMEG00000000270	CRNKL1	78	87.827	Ailuropoda_melanoleuca
ENSIPUG00000006751	crnkl1	98	84.605	ENSACIG00000015267	crnkl1	91	86.589	Amphilophus_citrinellus
ENSIPUG00000006751	crnkl1	95	87.064	ENSAOCG00000021964	crnkl1	91	87.045	Amphiprion_ocellaris
ENSIPUG00000006751	crnkl1	95	86.938	ENSAPEG00000015041	crnkl1	91	86.919	Amphiprion_percula
ENSIPUG00000006751	crnkl1	97	85.877	ENSATEG00000001068	crnkl1	90	87.172	Anabas_testudineus
ENSIPUG00000006751	crnkl1	93	86.736	ENSAPLG00000013105	CRNKL1	94	88.444	Anas_platyrhynchos
ENSIPUG00000006751	crnkl1	92	87.179	ENSACAG00000005284	CRNKL1	95	88.136	Anolis_carolinensis
ENSIPUG00000006751	crnkl1	85	86.504	ENSANAG00000024889	CRNKL1	97	86.504	Aotus_nancymaae
ENSIPUG00000006751	crnkl1	98	85.977	ENSACLG00000010813	crnkl1	94	84.951	Astatotilapia_calliptera
ENSIPUG00000006751	crnkl1	90	93.374	ENSAMXG00000018334	crnkl1	90	89.343	Astyanax_mexicanus
ENSIPUG00000006751	crnkl1	93	85.863	ENSBTAG00000008472	CRNKL1	94	87.827	Bos_taurus
ENSIPUG00000006751	crnkl1	91	61.120	WBGene00019762	M03F8.3	91	60.526	Caenorhabditis_elegans
ENSIPUG00000006751	crnkl1	93	85.373	ENSCJAG00000005393	CRNKL1	94	87.057	Callithrix_jacchus
ENSIPUG00000006751	crnkl1	93	86.119	ENSCAFG00000005333	CRNKL1	89	87.827	Canis_familiaris
ENSIPUG00000006751	crnkl1	93	86.119	ENSCAFG00020027488	CRNKL1	94	87.827	Canis_lupus_dingo
ENSIPUG00000006751	crnkl1	93	85.268	ENSCHIG00000013171	CRNKL1	94	87.211	Capra_hircus
ENSIPUG00000006751	crnkl1	92	86.165	ENSTSYG00000004197	CRNKL1	94	87.211	Carlito_syrichta
ENSIPUG00000006751	crnkl1	86	83.683	ENSCAPG00000010501	CRNKL1	96	85.619	Cavia_aperea
ENSIPUG00000006751	crnkl1	93	84.478	ENSCPOG00000004418	CRNKL1	94	86.287	Cavia_porcellus
ENSIPUG00000006751	crnkl1	93	85.224	ENSCCAG00000027037	CRNKL1	94	86.903	Cebus_capucinus
ENSIPUG00000006751	crnkl1	93	85.075	ENSCATG00000034247	CRNKL1	94	86.749	Cercocebus_atys
ENSIPUG00000006751	crnkl1	93	85.224	ENSCLAG00000013859	CRNKL1	94	87.057	Chinchilla_lanigera
ENSIPUG00000006751	crnkl1	93	85.075	ENSCSAG00000011434	CRNKL1	94	86.749	Chlorocebus_sabaeus
ENSIPUG00000006751	crnkl1	93	85.522	ENSCHOG00000006371	CRNKL1	79	87.365	Choloepus_hoffmanni
ENSIPUG00000006751	crnkl1	93	87.313	ENSCPBG00000023501	CRNKL1	94	89.214	Chrysemys_picta_bellii
ENSIPUG00000006751	crnkl1	90	68.624	ENSCING00000002709	-	94	68.624	Ciona_intestinalis
ENSIPUG00000006751	crnkl1	93	85.075	ENSCANG00000038789	CRNKL1	94	86.749	Colobus_angolensis_palliatus
ENSIPUG00000006751	crnkl1	93	85.373	ENSCGRG00001001115	-	94	87.211	Cricetulus_griseus_chok1gshd
ENSIPUG00000006751	crnkl1	93	85.373	ENSCGRG00001000687	-	94	87.211	Cricetulus_griseus_chok1gshd
ENSIPUG00000006751	crnkl1	93	85.373	ENSCGRG00000007854	Crnkl1	94	87.211	Cricetulus_griseus_crigri
ENSIPUG00000006751	crnkl1	98	83.475	ENSCSEG00000005594	crnkl1	82	88.752	Cynoglossus_semilaevis
ENSIPUG00000006751	crnkl1	90	90.015	ENSCVAG00000015172	crnkl1	87	89.985	Cyprinodon_variegatus
ENSIPUG00000006751	crnkl1	90	91.190	ENSDARG00000007901	crnkl1	91	88.338	Danio_rerio
ENSIPUG00000006751	crnkl1	92	86.207	ENSDNOG00000016226	CRNKL1	90	87.673	Dasypus_novemcinctus
ENSIPUG00000006751	crnkl1	90	80.398	ENSDORG00000023724	-	96	80.462	Dipodomys_ordii
ENSIPUG00000006751	crnkl1	90	79.632	ENSDORG00000030174	-	96	79.692	Dipodomys_ordii
ENSIPUG00000006751	crnkl1	93	83.852	ENSDORG00000000394	-	94	85.627	Dipodomys_ordii
ENSIPUG00000006751	crnkl1	91	67.620	FBgn0000377	crn	93	68.397	Drosophila_melanogaster
ENSIPUG00000006751	crnkl1	92	75.000	ENSETEG00000003711	CRNKL1	79	76.117	Echinops_telfairi
ENSIPUG00000006751	crnkl1	90	62.346	ENSEBUG00000013461	crnkl1	90	62.319	Eptatretus_burgeri
ENSIPUG00000006751	crnkl1	93	86.248	ENSEASG00005002072	CRNKL1	94	87.982	Equus_asinus_asinus
ENSIPUG00000006751	crnkl1	93	86.248	ENSECAG00000022215	CRNKL1	94	87.982	Equus_caballus
ENSIPUG00000006751	crnkl1	93	82.687	ENSEEUG00000000413	CRNKL1	87	84.438	Erinaceus_europaeus
ENSIPUG00000006751	crnkl1	90	88.974	ENSELUG00000015424	crnkl1	96	86.404	Esox_lucius
ENSIPUG00000006751	crnkl1	93	85.970	ENSFCAG00000000714	CRNKL1	94	87.827	Felis_catus
ENSIPUG00000006751	crnkl1	93	85.821	ENSFALG00000004611	CRNKL1	97	87.673	Ficedula_albicollis
ENSIPUG00000006751	crnkl1	93	85.075	ENSFDAG00000000604	CRNKL1	94	86.903	Fukomys_damarensis
ENSIPUG00000006751	crnkl1	90	89.862	ENSFHEG00000013163	crnkl1	84	89.831	Fundulus_heteroclitus
ENSIPUG00000006751	crnkl1	90	88.497	ENSGMOG00000007609	crnkl1	90	88.444	Gadus_morhua
ENSIPUG00000006751	crnkl1	93	85.522	ENSGALG00000008429	CRNKL1	94	87.211	Gallus_gallus
ENSIPUG00000006751	crnkl1	90	89.247	ENSGAFG00000014249	crnkl1	85	89.214	Gambusia_affinis
ENSIPUG00000006751	crnkl1	98	83.944	ENSGACG00000011852	crnkl1	92	85.652	Gasterosteus_aculeatus
ENSIPUG00000006751	crnkl1	91	86.910	ENSGAGG00000021233	CRNKL1	97	88.836	Gopherus_agassizii
ENSIPUG00000006751	crnkl1	93	84.925	ENSGGOG00000014176	CRNKL1	94	86.595	Gorilla_gorilla
ENSIPUG00000006751	crnkl1	98	85.836	ENSHBUG00000005246	crnkl1	90	87.427	Haplochromis_burtoni
ENSIPUG00000006751	crnkl1	92	85.542	ENSHGLG00000010856	CRNKL1	94	86.595	Heterocephalus_glaber_female
ENSIPUG00000006751	crnkl1	92	85.542	ENSHGLG00100011521	CRNKL1	94	86.595	Heterocephalus_glaber_male
ENSIPUG00000006751	crnkl1	90	88.804	ENSHCOG00000006420	crnkl1	93	88.752	Hippocampus_comes
ENSIPUG00000006751	crnkl1	93	85.522	ENSSTOG00000014747	CRNKL1	94	87.365	Ictidomys_tridecemlineatus
ENSIPUG00000006751	crnkl1	92	84.683	ENSJJAG00000016926	Crnkl1	94	85.693	Jaculus_jaculus
ENSIPUG00000006751	crnkl1	96	85.489	ENSKMAG00000003620	crnkl1	88	86.026	Kryptolebias_marmoratus
ENSIPUG00000006751	crnkl1	90	73.404	ENSLBEG00000003543	crnkl1	86	74.268	Labrus_bergylta
ENSIPUG00000006751	crnkl1	92	88.024	ENSLACG00000001129	CRNKL1	95	89.060	Latimeria_chalumnae
ENSIPUG00000006751	crnkl1	90	90.601	ENSLOCG00000016889	crnkl1	93	88.365	Lepisosteus_oculatus
ENSIPUG00000006751	crnkl1	91	86.343	ENSLAFG00000004512	CRNKL1	94	87.211	Loxodonta_africana
ENSIPUG00000006751	crnkl1	93	85.075	ENSMFAG00000039893	CRNKL1	94	86.749	Macaca_fascicularis
ENSIPUG00000006751	crnkl1	93	85.075	ENSMMUG00000007709	CRNKL1	94	86.749	Macaca_mulatta
ENSIPUG00000006751	crnkl1	93	85.075	ENSMNEG00000037490	CRNKL1	94	86.749	Macaca_nemestrina
ENSIPUG00000006751	crnkl1	93	85.075	ENSMLEG00000034885	CRNKL1	94	86.749	Mandrillus_leucophaeus
ENSIPUG00000006751	crnkl1	99	83.380	ENSMAMG00000008757	crnkl1	85	89.368	Mastacembelus_armatus
ENSIPUG00000006751	crnkl1	98	85.977	ENSMZEG00005022345	crnkl1	90	87.573	Maylandia_zebra
ENSIPUG00000006751	crnkl1	93	85.373	ENSMGAG00000003452	CRNKL1	89	87.057	Meleagris_gallopavo
ENSIPUG00000006751	crnkl1	93	85.224	ENSMAUG00000020764	Crnkl1	94	87.057	Mesocricetus_auratus
ENSIPUG00000006751	crnkl1	93	85.224	ENSMICG00000006048	CRNKL1	94	87.057	Microcebus_murinus
ENSIPUG00000006751	crnkl1	90	62.250	ENSMOCG00000004179	-	92	62.366	Microtus_ochrogaster
ENSIPUG00000006751	crnkl1	89	80.488	ENSMOCG00000000681	-	95	82.205	Microtus_ochrogaster
ENSIPUG00000006751	crnkl1	85	87.642	ENSMMOG00000017601	crnkl1	94	87.642	Mola_mola
ENSIPUG00000006751	crnkl1	92	81.900	ENSMODG00000010857	-	94	82.743	Monodelphis_domestica
ENSIPUG00000006751	crnkl1	92	84.077	ENSMODG00000005961	-	94	85.084	Monodelphis_domestica
ENSIPUG00000006751	crnkl1	96	63.121	ENSMALG00000011211	crnkl1	84	71.275	Monopterus_albus
ENSIPUG00000006751	crnkl1	93	85.672	MGP_CAROLIEiJ_G0024394	Crnkl1	94	87.365	Mus_caroli
ENSIPUG00000006751	crnkl1	93	85.522	ENSMUSG00000001767	Crnkl1	94	87.365	Mus_musculus
ENSIPUG00000006751	crnkl1	93	85.075	MGP_PahariEiJ_G0025838	Crnkl1	94	86.903	Mus_pahari
ENSIPUG00000006751	crnkl1	93	85.522	MGP_SPRETEiJ_G0025312	Crnkl1	94	87.365	Mus_spretus
ENSIPUG00000006751	crnkl1	93	85.970	ENSMPUG00000001226	CRNKL1	94	87.827	Mustela_putorius_furo
ENSIPUG00000006751	crnkl1	93	85.224	ENSMLUG00000016513	CRNKL1	84	87.057	Myotis_lucifugus
ENSIPUG00000006751	crnkl1	93	83.578	ENSNGAG00000023097	Crnkl1	94	85.325	Nannospalax_galili
ENSIPUG00000006751	crnkl1	98	86.119	ENSNBRG00000007867	crnkl1	89	87.719	Neolamprologus_brichardi
ENSIPUG00000006751	crnkl1	93	82.687	ENSNLEG00000009862	CRNKL1	94	84.284	Nomascus_leucogenys
ENSIPUG00000006751	crnkl1	92	80.838	ENSMEUG00000002361	-	94	81.846	Notamacropus_eugenii
ENSIPUG00000006751	crnkl1	93	86.716	ENSMEUG00000012167	-	97	88.752	Notamacropus_eugenii
ENSIPUG00000006751	crnkl1	82	58.960	ENSOPRG00000009242	-	61	59.223	Ochotona_princeps
ENSIPUG00000006751	crnkl1	93	84.776	ENSODEG00000012175	CRNKL1	94	86.595	Octodon_degus
ENSIPUG00000006751	crnkl1	98	85.634	ENSONIG00000018728	crnkl1	89	87.573	Oreochromis_niloticus
ENSIPUG00000006751	crnkl1	92	86.165	ENSOCUG00000015484	CRNKL1	78	88.136	Oryctolagus_cuniculus
ENSIPUG00000006751	crnkl1	98	82.062	ENSORLG00000017240	crnkl1	94	80.463	Oryzias_latipes
ENSIPUG00000006751	crnkl1	94	85.125	ENSORLG00020001742	crnkl1	87	87.519	Oryzias_latipes_hni
ENSIPUG00000006751	crnkl1	98	82.486	ENSORLG00015019564	crnkl1	87	87.519	Oryzias_latipes_hsok
ENSIPUG00000006751	crnkl1	95	85.051	ENSOMEG00000019895	crnkl1	91	84.985	Oryzias_melastigma
ENSIPUG00000006751	crnkl1	93	85.373	ENSOGAG00000011544	CRNKL1	94	87.057	Otolemur_garnettii
ENSIPUG00000006751	crnkl1	93	85.565	ENSOARG00000002150	CRNKL1	84	87.519	Ovis_aries
ENSIPUG00000006751	crnkl1	93	84.627	ENSPPAG00000027847	CRNKL1	78	86.287	Pan_paniscus
ENSIPUG00000006751	crnkl1	93	85.970	ENSPPRG00000001955	CRNKL1	94	87.827	Panthera_pardus
ENSIPUG00000006751	crnkl1	93	85.970	ENSPTIG00000007393	CRNKL1	94	87.827	Panthera_tigris_altaica
ENSIPUG00000006751	crnkl1	93	84.925	ENSPTRG00000030609	CRNKL1	94	86.595	Pan_troglodytes
ENSIPUG00000006751	crnkl1	93	85.075	ENSPANG00000017420	CRNKL1	94	86.749	Papio_anubis
ENSIPUG00000006751	crnkl1	90	86.329	ENSPKIG00000017093	crnkl1	85	86.371	Paramormyrops_kingsleyae
ENSIPUG00000006751	crnkl1	93	86.866	ENSPSIG00000012705	CRNKL1	94	88.752	Pelodiscus_sinensis
ENSIPUG00000006751	crnkl1	94	80.769	ENSPMGG00000006263	crnkl1	91	82.897	Periophthalmus_magnuspinnatus
ENSIPUG00000006751	crnkl1	93	85.373	ENSPEMG00000000073	-	94	87.211	Peromyscus_maniculatus_bairdii
ENSIPUG00000006751	crnkl1	94	81.416	ENSPMAG00000002250	crnkl1	97	81.416	Petromyzon_marinus
ENSIPUG00000006751	crnkl1	92	85.757	ENSPCIG00000025825	CRNKL1	91	87.211	Phascolarctos_cinereus
ENSIPUG00000006751	crnkl1	90	89.094	ENSPFOG00000005102	crnkl1	88	89.060	Poecilia_formosa
ENSIPUG00000006751	crnkl1	90	89.094	ENSPLAG00000007288	crnkl1	84	89.060	Poecilia_latipinna
ENSIPUG00000006751	crnkl1	90	89.247	ENSPMEG00000008865	crnkl1	88	89.214	Poecilia_mexicana
ENSIPUG00000006751	crnkl1	90	88.786	ENSPREG00000012615	crnkl1	87	88.906	Poecilia_reticulata
ENSIPUG00000006751	crnkl1	93	85.075	ENSPPYG00000010747	CRNKL1	76	86.749	Pongo_abelii
ENSIPUG00000006751	crnkl1	92	80.995	ENSPCAG00000003296	CRNKL1	80	81.818	Procavia_capensis
ENSIPUG00000006751	crnkl1	93	84.328	ENSPCOG00000017608	CRNKL1	78	86.133	Propithecus_coquereli
ENSIPUG00000006751	crnkl1	92	86.446	ENSPVAG00000006207	CRNKL1	79	87.519	Pteropus_vampyrus
ENSIPUG00000006751	crnkl1	98	85.836	ENSPNYG00000001977	crnkl1	90	87.427	Pundamilia_nyererei
ENSIPUG00000006751	crnkl1	95	90.173	ENSPNAG00000001507	crnkl1	93	90.462	Pygocentrus_nattereri
ENSIPUG00000006751	crnkl1	93	85.373	ENSRNOG00000040045	Crnkl1	94	87.211	Rattus_norvegicus
ENSIPUG00000006751	crnkl1	93	85.522	ENSRNOG00000010587	Crnkl1	94	87.365	Rattus_norvegicus
ENSIPUG00000006751	crnkl1	93	85.075	ENSRBIG00000031770	CRNKL1	94	86.749	Rhinopithecus_bieti
ENSIPUG00000006751	crnkl1	93	84.925	ENSRROG00000040450	CRNKL1	94	86.595	Rhinopithecus_roxellana
ENSIPUG00000006751	crnkl1	90	36.522	YLR117C	CLF1	99	36.575	Saccharomyces_cerevisiae
ENSIPUG00000006751	crnkl1	93	85.522	ENSSBOG00000029672	CRNKL1	94	87.057	Saimiri_boliviensis_boliviensis
ENSIPUG00000006751	crnkl1	90	70.750	ENSSHAG00000011199	CRNKL1	98	70.988	Sarcophilus_harrisii
ENSIPUG00000006751	crnkl1	96	86.272	ENSSFOG00015000946	crnkl1	89	86.735	Scleropages_formosus
ENSIPUG00000006751	crnkl1	93	87.463	ENSSMAG00000007933	crnkl1	84	89.077	Scophthalmus_maximus
ENSIPUG00000006751	crnkl1	95	80.058	ENSSDUG00000012625	crnkl1	88	80.029	Seriola_dumerili
ENSIPUG00000006751	crnkl1	95	86.172	ENSSLDG00000021413	crnkl1	89	86.152	Seriola_lalandi_dorsalis
ENSIPUG00000006751	crnkl1	93	85.224	ENSSARG00000006443	CRNKL1	78	87.057	Sorex_araneus
ENSIPUG00000006751	crnkl1	93	85.097	ENSSPUG00000005254	CRNKL1	94	86.903	Sphenodon_punctatus
ENSIPUG00000006751	crnkl1	93	87.834	ENSSPAG00000016150	crnkl1	87	87.834	Stegastes_partitus
ENSIPUG00000006751	crnkl1	93	85.863	ENSSSCG00000038587	CRNKL1	94	87.827	Sus_scrofa
ENSIPUG00000006751	crnkl1	93	85.075	ENSTGUG00000007645	CRNKL1	93	86.903	Taeniopygia_guttata
ENSIPUG00000006751	crnkl1	90	84.793	ENSTRUG00000015417	crnkl1	89	81.738	Takifugu_rubripes
ENSIPUG00000006751	crnkl1	90	89.555	ENSTNIG00000010710	crnkl1	94	89.522	Tetraodon_nigroviridis
ENSIPUG00000006751	crnkl1	85	85.041	ENSTBEG00000001304	CRNKL1	79	85.041	Tupaia_belangeri
ENSIPUG00000006751	crnkl1	85	83.089	ENSTTRG00000000484	CRNKL1	79	83.089	Tursiops_truncatus
ENSIPUG00000006751	crnkl1	93	85.970	ENSUAMG00000018586	CRNKL1	94	87.827	Ursus_americanus
ENSIPUG00000006751	crnkl1	93	85.970	ENSUMAG00000024957	CRNKL1	95	87.317	Ursus_maritimus
ENSIPUG00000006751	crnkl1	93	86.119	ENSVVUG00000012559	CRNKL1	78	87.827	Vulpes_vulpes
ENSIPUG00000006751	crnkl1	93	86.248	ENSXETG00000009698	crnkl1	94	88.290	Xenopus_tropicalis
ENSIPUG00000006751	crnkl1	90	89.247	ENSXCOG00000000824	crnkl1	87	89.214	Xiphophorus_couchianus
ENSIPUG00000006751	crnkl1	90	89.247	ENSXMAG00000006896	crnkl1	87	89.214	Xiphophorus_maculatus