EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000006780 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5922 bases
Position: chr22:5802831-5808752
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000009876	RRM_1	PF00076.22	7.1e-41	1	2
ENSIPUP00000009876	RRM_1	PF00076.22	7.1e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010311	-	621	-	ENSIPUP00000009876	206 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000006780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000006780	-	87	56.805	ENSIPUG00000024284	-	77	56.805
ENSIPUG00000006780	-	96	57.286	ENSIPUG00000016620	pabpc4	58	62.644
ENSIPUG00000006780	-	59	85.246	ENSIPUG00000024435	-	85	85.246
ENSIPUG00000006780	-	85	71.591	ENSIPUG00000021244	-	52	71.591
ENSIPUG00000006780	-	94	60.000	ENSIPUG00000010791	-	61	60.000
ENSIPUG00000006780	-	94	60.513	ENSIPUG00000008848	pabpc1a	59	60.513
ENSIPUG00000006780	-	73	35.616	ENSIPUG00000007089	RBM3	78	33.333
ENSIPUG00000006780	-	85	63.793	ENSIPUG00000012602	pabpc1l	63	63.793
ENSIPUG00000006780	-	88	51.977	ENSIPUG00000019895	-	53	51.977
ENSIPUG00000006780	-	64	50.758	ENSIPUG00000010020	-	66	50.758
ENSIPUG00000006780	-	58	59.167	ENSIPUG00000005537	-	92	59.167
ENSIPUG00000006780	-	85	65.909	ENSIPUG00000018724	-	56	65.909
ENSIPUG00000006780	-	96	93.434	ENSIPUG00000006760	-	99	93.434
ENSIPUG00000006780	-	86	30.435	ENSIPUG00000016702	tia1	77	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006780	-	85	62.069	ENSG00000101104	PABPC1L	95	62.069	Homo_sapiens
ENSIPUG00000006780	-	96	57.789	ENSAPOG00000010842	pabpc1l	60	57.789	Acanthochromis_polyacanthus
ENSIPUG00000006780	-	85	60.920	ENSAMEG00000004099	PABPC1L	57	60.920	Ailuropoda_melanoleuca
ENSIPUG00000006780	-	92	58.523	ENSACIG00000021004	-	70	58.523	Amphilophus_citrinellus
ENSIPUG00000006780	-	96	57.789	ENSAOCG00000006167	-	58	57.789	Amphiprion_ocellaris
ENSIPUG00000006780	-	97	57.000	ENSAPEG00000010558	-	91	57.000	Amphiprion_percula
ENSIPUG00000006780	-	85	62.644	ENSATEG00000007428	pabpc1l	60	61.453	Anabas_testudineus
ENSIPUG00000006780	-	85	62.644	ENSAPLG00000008415	PABPC1L	58	62.644	Anas_platyrhynchos
ENSIPUG00000006780	-	85	63.793	ENSACAG00000011841	PABPC1L	58	63.793	Anolis_carolinensis
ENSIPUG00000006780	-	85	60.920	ENSANAG00000026826	PABPC1L	60	60.920	Aotus_nancymaae
ENSIPUG00000006780	-	87	62.011	ENSACLG00000024791	pabpc1l	58	62.011	Astatotilapia_calliptera
ENSIPUG00000006780	-	85	63.218	ENSAMXG00000013552	pabpc1l	59	63.218	Astyanax_mexicanus
ENSIPUG00000006780	-	77	61.392	ENSBTAG00000055300	-	94	61.392	Bos_taurus
ENSIPUG00000006780	-	69	30.189	ENSBTAG00000016849	PABPC1L	53	30.189	Bos_taurus
ENSIPUG00000006780	-	77	57.407	ENSCJAG00000038506	-	93	57.407	Callithrix_jacchus
ENSIPUG00000006780	-	85	60.920	ENSCJAG00000017628	PABPC1L	60	60.920	Callithrix_jacchus
ENSIPUG00000006780	-	85	60.345	ENSCAFG00000009573	PABPC1L	57	60.345	Canis_familiaris
ENSIPUG00000006780	-	85	60.920	ENSCAFG00020013828	PABPC1L	60	60.920	Canis_lupus_dingo
ENSIPUG00000006780	-	85	60.920	ENSCHIG00000025759	PABPC1L	56	60.920	Capra_hircus
ENSIPUG00000006780	-	85	62.069	ENSTSYG00000006645	PABPC1L	60	62.069	Carlito_syrichta
ENSIPUG00000006780	-	89	59.091	ENSCAPG00000014519	PABPC1L	60	59.091	Cavia_aperea
ENSIPUG00000006780	-	85	59.770	ENSCPOG00000013633	PABPC1L	59	59.770	Cavia_porcellus
ENSIPUG00000006780	-	96	56.281	ENSCCAG00000023338	PABPC1L	60	56.281	Cebus_capucinus
ENSIPUG00000006780	-	85	62.644	ENSCATG00000034065	PABPC1L	60	62.644	Cercocebus_atys
ENSIPUG00000006780	-	85	59.195	ENSCLAG00000005298	PABPC1L	59	59.195	Chinchilla_lanigera
ENSIPUG00000006780	-	85	62.069	ENSCSAG00000014242	PABPC1L	60	62.069	Chlorocebus_sabaeus
ENSIPUG00000006780	-	57	65.254	ENSCPBG00000007810	-	72	65.254	Chrysemys_picta_bellii
ENSIPUG00000006780	-	85	64.368	ENSCPBG00000017755	-	82	64.368	Chrysemys_picta_bellii
ENSIPUG00000006780	-	95	55.866	ENSCSAVG00000003102	-	99	59.459	Ciona_savignyi
ENSIPUG00000006780	-	87	58.101	ENSCSAVG00000004246	-	63	58.101	Ciona_savignyi
ENSIPUG00000006780	-	85	62.644	ENSCANG00000037530	PABPC1L	60	62.644	Colobus_angolensis_palliatus
ENSIPUG00000006780	-	96	54.271	ENSCGRG00001021938	Pabpc1l	63	54.271	Cricetulus_griseus_chok1gshd
ENSIPUG00000006780	-	96	54.271	ENSCGRG00000007946	Pabpc1l	63	54.271	Cricetulus_griseus_crigri
ENSIPUG00000006780	-	94	59.184	ENSCSEG00000021295	pabpc1l	66	59.184	Cynoglossus_semilaevis
ENSIPUG00000006780	-	85	62.069	ENSCVAG00000015943	-	93	56.338	Cyprinodon_variegatus
ENSIPUG00000006780	-	85	63.793	ENSDARG00000002597	pabpc1l	82	61.667	Danio_rerio
ENSIPUG00000006780	-	85	61.494	ENSDNOG00000048450	PABPC1L	60	61.494	Dasypus_novemcinctus
ENSIPUG00000006780	-	85	60.345	ENSDORG00000001067	Pabpc1l	60	60.345	Dipodomys_ordii
ENSIPUG00000006780	-	77	60.127	ENSEASG00005023408	-	94	60.127	Equus_asinus_asinus
ENSIPUG00000006780	-	86	60.920	ENSEEUG00000005978	PABPC1L	60	60.920	Erinaceus_europaeus
ENSIPUG00000006780	-	96	60.406	ENSELUG00000001811	pabpc1l	66	60.406	Esox_lucius
ENSIPUG00000006780	-	85	60.920	ENSFCAG00000011692	PABPC1L	60	60.920	Felis_catus
ENSIPUG00000006780	-	85	63.218	ENSFALG00000005372	PABPC1L	62	63.218	Ficedula_albicollis
ENSIPUG00000006780	-	85	59.770	ENSFDAG00000008291	PABPC1L	62	59.770	Fukomys_damarensis
ENSIPUG00000006780	-	85	62.644	ENSFHEG00000003398	pabpc1l	60	62.644	Fundulus_heteroclitus
ENSIPUG00000006780	-	84	67.857	ENSGMOG00000004437	pabpc1l	59	62.069	Gadus_morhua
ENSIPUG00000006780	-	85	63.218	ENSGALG00000004123	PABPC1L	87	63.218	Gallus_gallus
ENSIPUG00000006780	-	85	52.913	ENSGAFG00000021057	pabpc1l	61	52.913	Gambusia_affinis
ENSIPUG00000006780	-	85	62.644	ENSGACG00000002792	pabpc1l	59	62.644	Gasterosteus_aculeatus
ENSIPUG00000006780	-	85	64.368	ENSGAGG00000000589	PABPC1L	66	64.368	Gopherus_agassizii
ENSIPUG00000006780	-	85	62.069	ENSGGOG00000004584	PABPC1L	60	62.069	Gorilla_gorilla
ENSIPUG00000006780	-	87	62.011	ENSHBUG00000006134	pabpc1l	65	62.011	Haplochromis_burtoni
ENSIPUG00000006780	-	85	59.770	ENSHGLG00000008434	PABPC1L	60	59.770	Heterocephalus_glaber_female
ENSIPUG00000006780	-	85	59.770	ENSHGLG00100012151	PABPC1L	60	59.770	Heterocephalus_glaber_male
ENSIPUG00000006780	-	82	62.500	ENSHGLG00100019506	-	94	62.500	Heterocephalus_glaber_male
ENSIPUG00000006780	-	93	58.462	ENSHCOG00000009270	pabpc1l	64	58.462	Hippocampus_comes
ENSIPUG00000006780	-	96	56.784	ENSSTOG00000003739	PABPC1L	60	56.784	Ictidomys_tridecemlineatus
ENSIPUG00000006780	-	85	37.931	ENSJJAG00000022406	Pabpc1l	55	37.931	Jaculus_jaculus
ENSIPUG00000006780	-	85	62.644	ENSKMAG00000016847	pabpc1l	65	62.644	Kryptolebias_marmoratus
ENSIPUG00000006780	-	93	59.162	ENSLBEG00000010084	pabpc1l	58	62.644	Labrus_bergylta
ENSIPUG00000006780	-	94	60.714	ENSLACG00000005762	PABPC1L	67	60.714	Latimeria_chalumnae
ENSIPUG00000006780	-	85	64.368	ENSLOCG00000007519	pabpc1l	58	64.368	Lepisosteus_oculatus
ENSIPUG00000006780	-	85	59.884	ENSLAFG00000003553	PABPC1L	59	59.884	Loxodonta_africana
ENSIPUG00000006780	-	85	62.644	ENSMFAG00000040365	PABPC1L	60	62.644	Macaca_fascicularis
ENSIPUG00000006780	-	85	62.644	ENSMNEG00000032298	PABPC1L	59	62.644	Macaca_nemestrina
ENSIPUG00000006780	-	85	62.644	ENSMLEG00000043139	PABPC1L	60	62.644	Mandrillus_leucophaeus
ENSIPUG00000006780	-	87	62.011	ENSMAMG00000011854	pabpc1l	60	62.011	Mastacembelus_armatus
ENSIPUG00000006780	-	87	62.011	ENSMZEG00005023713	pabpc1l	58	62.011	Maylandia_zebra
ENSIPUG00000006780	-	85	63.218	ENSMGAG00000003674	PABPC1L	58	63.218	Meleagris_gallopavo
ENSIPUG00000006780	-	96	53.769	ENSMOCG00000013186	Pabpc1l	63	53.769	Microtus_ochrogaster
ENSIPUG00000006780	-	87	60.894	ENSMMOG00000020574	-	83	60.833	Mola_mola
ENSIPUG00000006780	-	85	64.368	ENSMODG00000016198	PABPC1L	62	64.368	Monodelphis_domestica
ENSIPUG00000006780	-	85	62.069	ENSMALG00000021622	pabpc1l	61	62.069	Monopterus_albus
ENSIPUG00000006780	-	98	54.271	MGP_CAROLIEiJ_G0024627	Pabpc1l	66	54.271	Mus_caroli
ENSIPUG00000006780	-	98	54.271	ENSMUSG00000054582	Pabpc1l	66	54.271	Mus_musculus
ENSIPUG00000006780	-	98	53.769	MGP_PahariEiJ_G0026071	Pabpc1l	65	53.769	Mus_pahari
ENSIPUG00000006780	-	98	54.271	MGP_SPRETEiJ_G0025549	Pabpc1l	66	54.271	Mus_spretus
ENSIPUG00000006780	-	85	60.920	ENSMPUG00000017646	PABPC1L	59	60.920	Mustela_putorius_furo
ENSIPUG00000006780	-	85	59.770	ENSMLUG00000006324	PABPC1L	58	59.770	Myotis_lucifugus
ENSIPUG00000006780	-	85	58.046	ENSNGAG00000010458	Pabpc1l	60	53.266	Nannospalax_galili
ENSIPUG00000006780	-	92	58.523	ENSNBRG00000016633	pabpc1l	70	58.523	Neolamprologus_brichardi
ENSIPUG00000006780	-	85	62.644	ENSMEUG00000007905	-	60	62.644	Notamacropus_eugenii
ENSIPUG00000006780	-	85	61.628	ENSOPRG00000011846	PABPC1L	60	61.628	Ochotona_princeps
ENSIPUG00000006780	-	96	54.774	ENSODEG00000015482	PABPC1L	68	54.774	Octodon_degus
ENSIPUG00000006780	-	73	56.954	ENSODEG00000002920	-	91	56.954	Octodon_degus
ENSIPUG00000006780	-	87	62.011	ENSONIG00000017314	pabpc1l	58	62.011	Oreochromis_niloticus
ENSIPUG00000006780	-	87	55.676	ENSOANG00000015793	-	51	55.676	Ornithorhynchus_anatinus
ENSIPUG00000006780	-	85	62.069	ENSOCUG00000003005	PABPC1L	57	62.069	Oryctolagus_cuniculus
ENSIPUG00000006780	-	85	62.069	ENSORLG00000010322	pabpc1l	71	61.006	Oryzias_latipes
ENSIPUG00000006780	-	85	62.069	ENSORLG00020021193	pabpc1l	71	61.006	Oryzias_latipes_hni
ENSIPUG00000006780	-	85	62.069	ENSORLG00015017018	pabpc1l	71	61.006	Oryzias_latipes_hsok
ENSIPUG00000006780	-	85	53.202	ENSOMEG00000010789	pabpc1l	60	53.202	Oryzias_melastigma
ENSIPUG00000006780	-	85	58.621	ENSOGAG00000032999	PABPC1L	59	58.621	Otolemur_garnettii
ENSIPUG00000006780	-	85	60.345	ENSOARG00000004578	PABPC1L	60	60.345	Ovis_aries
ENSIPUG00000006780	-	85	62.069	ENSPPAG00000039677	PABPC1L	60	62.069	Pan_paniscus
ENSIPUG00000006780	-	84	60.920	ENSPPRG00000019327	-	90	60.920	Panthera_pardus
ENSIPUG00000006780	-	85	60.920	ENSPTIG00000006524	PABPC1L	61	60.920	Panthera_tigris_altaica
ENSIPUG00000006780	-	85	62.069	ENSPTRG00000013531	PABPC1L	95	62.069	Pan_troglodytes
ENSIPUG00000006780	-	85	62.644	ENSPANG00000018788	PABPC1L	60	62.644	Papio_anubis
ENSIPUG00000006780	-	94	59.487	ENSPKIG00000007322	pabpc1l	59	59.487	Paramormyrops_kingsleyae
ENSIPUG00000006780	-	59	63.636	ENSPKIG00000016810	-	85	63.636	Paramormyrops_kingsleyae
ENSIPUG00000006780	-	85	64.368	ENSPSIG00000013289	PABPC1L	87	64.368	Pelodiscus_sinensis
ENSIPUG00000006780	-	84	63.218	ENSPMGG00000023117	pabpc1l	91	63.218	Periophthalmus_magnuspinnatus
ENSIPUG00000006780	-	82	38.272	ENSPMGG00000023121	-	60	38.272	Periophthalmus_magnuspinnatus
ENSIPUG00000006780	-	96	53.769	ENSPEMG00000020671	Pabpc1l	60	53.769	Peromyscus_maniculatus_bairdii
ENSIPUG00000006780	-	85	62.644	ENSPFOG00000013241	pabpc1l	59	62.644	Poecilia_formosa
ENSIPUG00000006780	-	58	61.667	ENSPLAG00000023686	-	85	61.667	Poecilia_latipinna
ENSIPUG00000006780	-	85	62.644	ENSPLAG00000017490	-	65	62.644	Poecilia_latipinna
ENSIPUG00000006780	-	85	62.644	ENSPMEG00000007677	pabpc1l	59	62.644	Poecilia_mexicana
ENSIPUG00000006780	-	58	61.667	ENSPMEG00000009185	-	81	61.667	Poecilia_mexicana
ENSIPUG00000006780	-	93	59.162	ENSPREG00000015886	pabpc1l	89	59.162	Poecilia_reticulata
ENSIPUG00000006780	-	85	62.069	ENSPPYG00000011042	PABPC1L	60	62.069	Pongo_abelii
ENSIPUG00000006780	-	83	61.111	ENSPCAG00000011787	-	61	61.111	Procavia_capensis
ENSIPUG00000006780	-	85	59.770	ENSPCOG00000020630	PABPC1L	60	59.770	Propithecus_coquereli
ENSIPUG00000006780	-	85	60.920	ENSPVAG00000012663	PABPC1L	58	60.920	Pteropus_vampyrus
ENSIPUG00000006780	-	93	59.686	ENSPNYG00000004101	pabpc1l	70	58.523	Pundamilia_nyererei
ENSIPUG00000006780	-	85	63.793	ENSPNAG00000021248	pabpc1l	54	63.793	Pygocentrus_nattereri
ENSIPUG00000006780	-	85	58.621	ENSRNOG00000012750	Pabpc1l	60	58.621	Rattus_norvegicus
ENSIPUG00000006780	-	85	62.644	ENSRBIG00000035381	PABPC1L	60	62.644	Rhinopithecus_bieti
ENSIPUG00000006780	-	85	62.069	ENSRROG00000044498	PABPC1L	60	62.069	Rhinopithecus_roxellana
ENSIPUG00000006780	-	85	62.069	ENSSBOG00000009532	-	60	62.069	Saimiri_boliviensis_boliviensis
ENSIPUG00000006780	-	84	64.286	ENSSHAG00000011446	PABPC1L	51	64.286	Sarcophilus_harrisii
ENSIPUG00000006780	-	85	64.368	ENSSFOG00015017304	pabpc1l	59	64.368	Scleropages_formosus
ENSIPUG00000006780	-	87	62.011	ENSSMAG00000010516	pabpc1l	91	60.317	Scophthalmus_maximus
ENSIPUG00000006780	-	85	60.920	ENSSDUG00000014743	pabpc1l	59	60.920	Seriola_dumerili
ENSIPUG00000006780	-	92	56.250	ENSSLDG00000006981	pabpc1l	74	59.777	Seriola_lalandi_dorsalis
ENSIPUG00000006780	-	85	64.368	ENSSPUG00000004233	PABPC1L	58	64.368	Sphenodon_punctatus
ENSIPUG00000006780	-	85	62.069	ENSSPAG00000017137	pabpc1l	66	62.069	Stegastes_partitus
ENSIPUG00000006780	-	85	60.920	ENSSSCG00000007382	PABPC1L	60	60.920	Sus_scrofa
ENSIPUG00000006780	-	85	64.368	ENSTGUG00000005114	PABPC1L	60	64.368	Taeniopygia_guttata
ENSIPUG00000006780	-	85	62.644	ENSTRUG00000011085	pabpc1l	59	62.644	Takifugu_rubripes
ENSIPUG00000006780	-	85	61.714	ENSTNIG00000017903	pabpc1l	58	61.714	Tetraodon_nigroviridis
ENSIPUG00000006780	-	84	59.195	ENSTTRG00000007618	PABPC1L	60	59.195	Tursiops_truncatus
ENSIPUG00000006780	-	85	60.920	ENSUAMG00000017682	PABPC1L	62	60.920	Ursus_americanus
ENSIPUG00000006780	-	84	58.333	ENSUMAG00000025436	PABPC1L	80	58.333	Ursus_maritimus
ENSIPUG00000006780	-	85	60.920	ENSVVUG00000018939	PABPC1L	61	60.920	Vulpes_vulpes
ENSIPUG00000006780	-	84	63.793	ENSXETG00000022831	pabpc1l	58	63.793	Xenopus_tropicalis
ENSIPUG00000006780	-	92	57.955	ENSXCOG00000005459	pabpc1l	92	58.779	Xiphophorus_couchianus
ENSIPUG00000006780	-	87	61.453	ENSXMAG00000017135	pabpc1l	65	61.453	Xiphophorus_maculatus