EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000006916 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 6997 bases
Position: chr14:4378194-4385190
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	1	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	2	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	3	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	4	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	5	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	6	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	7	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	8	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	9	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	10	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	11	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	12	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	13	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	14	15
ENSIPUP00000010094	zf-C2H2	PF00096.26	1.8e-81	15	15
ENSIPUP00000010094	zf-met	PF12874.7	4.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010537	-	1860	-	ENSIPUP00000010094	619 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000006916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000006916	-	77	43.165	ENSIPUG00000012830	-	79	43.165
ENSIPUG00000006916	-	100	56.436	ENSIPUG00000017575	-	76	53.465
ENSIPUG00000006916	-	87	55.941	ENSIPUG00000015203	-	83	48.649
ENSIPUG00000006916	-	86	61.589	ENSIPUG00000023635	-	95	61.589
ENSIPUG00000006916	-	86	57.931	ENSIPUG00000021434	-	96	57.931
ENSIPUG00000006916	-	78	57.746	ENSIPUG00000004428	-	79	57.746
ENSIPUG00000006916	-	86	55.381	ENSIPUG00000023688	-	97	56.620
ENSIPUG00000006916	-	82	37.097	ENSIPUG00000008581	znf319b	95	36.500
ENSIPUG00000006916	-	87	56.597	ENSIPUG00000015121	-	73	56.597
ENSIPUG00000006916	-	88	40.714	ENSIPUG00000004905	znf236	79	40.714
ENSIPUG00000006916	-	75	37.963	ENSIPUG00000012109	ZN12	51	37.963
ENSIPUG00000006916	-	76	37.879	ENSIPUG00000004551	scrt1a	53	37.879
ENSIPUG00000006916	-	77	55.220	ENSIPUG00000021527	-	92	55.220
ENSIPUG00000006916	-	76	58.209	ENSIPUG00000021484	-	99	58.209
ENSIPUG00000006916	-	86	59.701	ENSIPUG00000015601	-	71	59.701
ENSIPUG00000006916	-	75	32.716	ENSIPUG00000015037	znf711	52	32.540
ENSIPUG00000006916	-	85	60.072	ENSIPUG00000015233	-	70	60.072
ENSIPUG00000006916	-	91	42.857	ENSIPUG00000021407	-	73	42.857
ENSIPUG00000006916	-	86	52.008	ENSIPUG00000015400	-	96	54.525
ENSIPUG00000006916	-	99	36.449	ENSIPUG00000001248	prdm5	87	35.629
ENSIPUG00000006916	-	83	57.980	ENSIPUG00000016075	-	100	57.980
ENSIPUG00000006916	-	87	59.600	ENSIPUG00000015177	-	69	54.167
ENSIPUG00000006916	-	79	33.533	ENSIPUG00000024004	-	80	33.533
ENSIPUG00000006916	-	97	59.155	ENSIPUG00000014798	-	59	59.155
ENSIPUG00000006916	-	98	60.190	ENSIPUG00000023513	-	59	59.009
ENSIPUG00000006916	-	97	43.939	ENSIPUG00000013740	prdm1b	51	43.939
ENSIPUG00000006916	-	76	57.798	ENSIPUG00000011073	-	98	57.798
ENSIPUG00000006916	-	85	51.099	ENSIPUG00000016009	znf596	66	51.099
ENSIPUG00000006916	-	77	36.095	ENSIPUG00000017653	patz1	60	36.095
ENSIPUG00000006916	-	85	58.962	ENSIPUG00000007934	-	98	58.962
ENSIPUG00000006916	-	76	40.113	ENSIPUG00000009577	-	62	39.565
ENSIPUG00000006916	-	76	45.026	ENSIPUG00000011652	znf648	74	45.026
ENSIPUG00000006916	-	78	42.130	ENSIPUG00000003040	zbtb47a	82	42.130
ENSIPUG00000006916	-	77	60.241	ENSIPUG00000005733	-	67	60.241
ENSIPUG00000006916	-	76	59.799	ENSIPUG00000021556	-	91	59.799
ENSIPUG00000006916	-	95	66.258	ENSIPUG00000015294	-	74	63.636
ENSIPUG00000006916	-	84	48.936	ENSIPUG00000022928	sall1b	55	48.936
ENSIPUG00000006916	-	80	34.066	ENSIPUG00000013526	-	85	34.066
ENSIPUG00000006916	-	84	35.811	ENSIPUG00000011967	zbtb41	53	36.137
ENSIPUG00000006916	-	79	42.130	ENSIPUG00000011399	zbtb47b	81	42.130
ENSIPUG00000006916	-	77	59.664	ENSIPUG00000005339	-	86	59.664
ENSIPUG00000006916	-	82	57.440	ENSIPUG00000022751	-	95	57.605
ENSIPUG00000006916	-	76	45.928	ENSIPUG00000022266	ZNF135	64	45.928
ENSIPUG00000006916	-	76	37.956	ENSIPUG00000000131	snai2	84	37.956
ENSIPUG00000006916	-	89	55.120	ENSIPUG00000015468	-	94	52.083
ENSIPUG00000006916	-	75	49.096	ENSIPUG00000013315	-	98	48.523
ENSIPUG00000006916	-	79	37.968	ENSIPUG00000011258	-	94	36.235
ENSIPUG00000006916	-	81	58.257	ENSIPUG00000021472	-	82	58.257
ENSIPUG00000006916	-	95	58.571	ENSIPUG00000003960	-	89	58.571
ENSIPUG00000006916	-	80	41.818	ENSIPUG00000024011	-	53	41.818
ENSIPUG00000006916	-	84	53.448	ENSIPUG00000013083	-	51	53.448
ENSIPUG00000006916	-	80	39.648	ENSIPUG00000007076	-	94	40.278
ENSIPUG00000006916	-	85	56.170	ENSIPUG00000023761	-	85	56.170
ENSIPUG00000006916	-	76	58.804	ENSIPUG00000002655	-	100	57.895
ENSIPUG00000006916	-	81	56.322	ENSIPUG00000021441	-	98	56.322
ENSIPUG00000006916	-	75	37.879	ENSIPUG00000005547	-	57	37.879
ENSIPUG00000006916	-	85	58.462	ENSIPUG00000012960	-	98	58.462
ENSIPUG00000006916	-	85	59.426	ENSIPUG00000021998	-	93	59.426
ENSIPUG00000006916	-	77	30.719	ENSIPUG00000002510	-	56	31.169
ENSIPUG00000006916	-	86	63.968	ENSIPUG00000006936	-	97	58.020
ENSIPUG00000006916	-	84	61.290	ENSIPUG00000005581	-	77	61.290
ENSIPUG00000006916	-	80	59.052	ENSIPUG00000001941	-	89	59.052
ENSIPUG00000006916	-	77	55.973	ENSIPUG00000013065	-	95	54.545
ENSIPUG00000006916	-	71	36.686	ENSIPUG00000019205	-	75	36.686
ENSIPUG00000006916	-	77	58.309	ENSIPUG00000022741	-	80	58.309
ENSIPUG00000006916	-	78	58.021	ENSIPUG00000021518	-	91	57.937
ENSIPUG00000006916	-	90	55.063	ENSIPUG00000021515	-	91	55.063
ENSIPUG00000006916	-	85	35.185	ENSIPUG00000015844	snai1b	64	35.185
ENSIPUG00000006916	-	97	56.250	ENSIPUG00000003011	-	69	56.250
ENSIPUG00000006916	-	77	41.615	ENSIPUG00000005379	e4f1	71	37.333
ENSIPUG00000006916	-	85	60.736	ENSIPUG00000009750	-	94	60.736
ENSIPUG00000006916	-	90	43.125	ENSIPUG00000012769	gfi1b	61	43.125
ENSIPUG00000006916	-	87	30.651	ENSIPUG00000018102	znf646	98	31.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006916	-	77	43.464	ENSAPOG00000013511	-	53	43.464	Acanthochromis_polyacanthus
ENSIPUG00000006916	-	88	41.163	ENSAPOG00000004328	-	92	41.163	Acanthochromis_polyacanthus
ENSIPUG00000006916	-	88	41.228	ENSACIG00000010739	-	98	41.228	Amphilophus_citrinellus
ENSIPUG00000006916	-	88	41.860	ENSAOCG00000007045	-	89	41.860	Amphiprion_ocellaris
ENSIPUG00000006916	-	77	46.447	ENSAPEG00000016483	-	59	46.447	Amphiprion_percula
ENSIPUG00000006916	-	94	42.195	ENSAPEG00000001596	-	83	42.195	Amphiprion_percula
ENSIPUG00000006916	-	85	42.029	ENSATEG00000006085	-	90	42.029	Anabas_testudineus
ENSIPUG00000006916	-	76	52.553	ENSACAG00000000082	-	99	52.553	Anolis_carolinensis
ENSIPUG00000006916	-	76	51.572	ENSACAG00000025537	-	100	51.572	Anolis_carolinensis
ENSIPUG00000006916	-	75	63.296	ENSAMXG00000035949	-	80	63.296	Astyanax_mexicanus
ENSIPUG00000006916	-	79	55.899	ENSAMXG00000026143	-	97	55.899	Astyanax_mexicanus
ENSIPUG00000006916	-	86	38.484	ENSAMXG00000017199	-	50	38.484	Astyanax_mexicanus
ENSIPUG00000006916	-	78	58.716	ENSAMXG00000033013	-	82	58.716	Astyanax_mexicanus
ENSIPUG00000006916	-	77	56.175	ENSAMXG00000036257	-	93	56.175	Astyanax_mexicanus
ENSIPUG00000006916	-	84	55.493	ENSAMXG00000032237	-	95	55.493	Astyanax_mexicanus
ENSIPUG00000006916	-	85	54.264	ENSAMXG00000012873	-	94	55.401	Astyanax_mexicanus
ENSIPUG00000006916	-	84	61.395	ENSAMXG00000035145	-	68	61.395	Astyanax_mexicanus
ENSIPUG00000006916	-	83	40.708	ENSCVAG00000011235	-	94	40.708	Cyprinodon_variegatus
ENSIPUG00000006916	-	84	46.903	ENSELUG00000013844	-	79	35.897	Esox_lucius
ENSIPUG00000006916	-	88	47.989	ENSELUG00000013357	-	85	49.189	Esox_lucius
ENSIPUG00000006916	-	87	43.885	ENSELUG00000021287	-	81	43.885	Esox_lucius
ENSIPUG00000006916	-	78	45.939	ENSFHEG00000019915	-	75	45.939	Fundulus_heteroclitus
ENSIPUG00000006916	-	77	46.094	ENSGMOG00000003238	-	100	46.094	Gadus_morhua
ENSIPUG00000006916	-	85	45.685	ENSGAFG00000003150	-	86	48.276	Gambusia_affinis
ENSIPUG00000006916	-	83	40.288	ENSGAFG00000012977	-	92	40.288	Gambusia_affinis
ENSIPUG00000006916	-	87	42.280	ENSKMAG00000004988	-	86	42.280	Kryptolebias_marmoratus
ENSIPUG00000006916	-	85	47.826	ENSLOCG00000014366	-	94	44.805	Lepisosteus_oculatus
ENSIPUG00000006916	-	77	44.540	ENSLOCG00000014144	-	100	44.884	Lepisosteus_oculatus
ENSIPUG00000006916	-	85	46.447	ENSMAMG00000016542	-	62	46.447	Mastacembelus_armatus
ENSIPUG00000006916	-	91	42.033	ENSMAMG00000019301	-	95	44.571	Mastacembelus_armatus
ENSIPUG00000006916	-	85	37.831	ENSMMOG00000009852	-	98	45.963	Mola_mola
ENSIPUG00000006916	-	85	47.518	ENSMALG00000005554	-	98	42.510	Monopterus_albus
ENSIPUG00000006916	-	77	45.528	ENSOCUG00000005876	-	100	45.067	Oryctolagus_cuniculus
ENSIPUG00000006916	-	79	49.876	ENSPKIG00000006616	-	60	49.876	Paramormyrops_kingsleyae
ENSIPUG00000006916	-	90	42.636	ENSPMGG00000017633	-	91	42.636	Periophthalmus_magnuspinnatus
ENSIPUG00000006916	-	83	39.659	ENSPFOG00000010682	-	96	39.607	Poecilia_formosa
ENSIPUG00000006916	-	76	38.976	ENSPLAG00000002892	-	68	38.976	Poecilia_latipinna
ENSIPUG00000006916	-	83	39.659	ENSPMEG00000001399	-	92	38.847	Poecilia_mexicana
ENSIPUG00000006916	-	68	38.384	ENSPREG00000002582	-	67	38.384	Poecilia_reticulata
ENSIPUG00000006916	-	83	39.903	ENSPREG00000001386	-	92	39.098	Poecilia_reticulata
ENSIPUG00000006916	-	80	63.291	ENSPNAG00000015116	-	78	63.291	Pygocentrus_nattereri
ENSIPUG00000006916	-	77	41.534	ENSPNAG00000025570	-	81	44.543	Pygocentrus_nattereri
ENSIPUG00000006916	-	76	56.677	ENSPNAG00000000219	-	87	56.677	Pygocentrus_nattereri
ENSIPUG00000006916	-	76	51.813	ENSSFOG00015006108	-	59	51.813	Scleropages_formosus
ENSIPUG00000006916	-	72	58.182	ENSSMAG00000009115	-	88	58.182	Scophthalmus_maximus
ENSIPUG00000006916	-	75	56.098	ENSSDUG00000002195	-	85	56.098	Seriola_dumerili
ENSIPUG00000006916	-	85	42.239	ENSSDUG00000006463	-	93	41.905	Seriola_dumerili
ENSIPUG00000006916	-	86	45.679	ENSSLDG00000006724	-	99	45.679	Seriola_lalandi_dorsalis
ENSIPUG00000006916	-	83	41.958	ENSSLDG00000020727	-	98	53.846	Seriola_lalandi_dorsalis
ENSIPUG00000006916	-	78	44.014	ENSSPAG00000012960	-	80	44.014	Stegastes_partitus
ENSIPUG00000006916	-	75	54.545	ENSSPAG00000021008	-	96	54.545	Stegastes_partitus
ENSIPUG00000006916	-	87	40.547	ENSTRUG00000021675	-	78	40.496	Takifugu_rubripes
ENSIPUG00000006916	-	85	43.388	ENSTRUG00000005321	-	96	42.105	Takifugu_rubripes
ENSIPUG00000006916	-	75	48.718	ENSTNIG00000000320	-	100	47.982	Tetraodon_nigroviridis
ENSIPUG00000006916	-	75	44.479	ENSTNIG00000008200	-	99	44.479	Tetraodon_nigroviridis
ENSIPUG00000006916	-	84	50.753	ENSXETG00000006575	znf420	84	50.753	Xenopus_tropicalis
ENSIPUG00000006916	-	87	43.509	ENSXCOG00000009665	-	83	43.509	Xiphophorus_couchianus
ENSIPUG00000006916	-	83	40.288	ENSXMAG00000028625	-	92	40.288	Xiphophorus_maculatus