EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000006936 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 12468 bases
Position: chr14:4386177-4398644
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000010239	zf-C2H2	PF00096.26	3.2e-41	1	7
ENSIPUP00000010239	zf-C2H2	PF00096.26	3.2e-41	2	7
ENSIPUP00000010239	zf-C2H2	PF00096.26	3.2e-41	3	7
ENSIPUP00000010239	zf-C2H2	PF00096.26	3.2e-41	4	7
ENSIPUP00000010239	zf-C2H2	PF00096.26	3.2e-41	5	7
ENSIPUP00000010239	zf-C2H2	PF00096.26	3.2e-41	6	7
ENSIPUP00000010239	zf-C2H2	PF00096.26	3.2e-41	7	7
ENSIPUP00000010304	zf-C2H2	PF00096.26	1.7e-39	1	6
ENSIPUP00000010304	zf-C2H2	PF00096.26	1.7e-39	2	6
ENSIPUP00000010304	zf-C2H2	PF00096.26	1.7e-39	3	6
ENSIPUP00000010304	zf-C2H2	PF00096.26	1.7e-39	4	6
ENSIPUP00000010304	zf-C2H2	PF00096.26	1.7e-39	5	6
ENSIPUP00000010304	zf-C2H2	PF00096.26	1.7e-39	6	6
ENSIPUP00000010304	zf-met	PF12874.7	1.2e-09	1	1
ENSIPUP00000010239	zf-met	PF12874.7	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010684	-	966	-	ENSIPUP00000010239	321 (aa)	-	-
ENSIPUT00000010749	-	954	-	ENSIPUP00000010304	317 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000006936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000006936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000006936	-	92	61.429	ENSIPUG00000015601	-	74	61.429
ENSIPUG00000006936	-	90	39.456	ENSIPUG00000003040	zbtb47a	78	39.394
ENSIPUG00000006936	-	95	56.410	ENSIPUG00000001941	-	90	56.561
ENSIPUG00000006936	-	77	36.607	ENSIPUG00000013526	-	86	35.859
ENSIPUG00000006936	-	88	53.846	ENSIPUG00000005733	-	77	52.966
ENSIPUG00000006936	-	97	50.000	ENSIPUG00000016009	znf596	82	50.000
ENSIPUG00000006936	-	95	61.582	ENSIPUG00000002655	-	97	60.099
ENSIPUG00000006936	-	95	60.000	ENSIPUG00000003011	-	57	60.000
ENSIPUG00000006936	-	91	58.721	ENSIPUG00000021484	-	97	58.721
ENSIPUG00000006936	-	97	58.904	ENSIPUG00000011073	-	97	60.284
ENSIPUG00000006936	-	99	59.833	ENSIPUG00000021998	-	92	61.638
ENSIPUG00000006936	-	94	45.385	ENSIPUG00000022266	ZNF135	70	46.957
ENSIPUG00000006936	-	97	73.282	ENSIPUG00000015294	-	64	73.282
ENSIPUG00000006936	-	87	45.614	ENSIPUG00000024007	-	53	45.614
ENSIPUG00000006936	-	89	38.857	ENSIPUG00000005379	e4f1	70	40.523
ENSIPUG00000006936	-	78	41.129	ENSIPUG00000012109	ZN12	51	41.410
ENSIPUG00000006936	-	82	39.179	ENSIPUG00000008581	znf319b	93	39.179
ENSIPUG00000006936	-	81	39.286	ENSIPUG00000019706	-	62	41.000
ENSIPUG00000006936	-	78	40.672	ENSIPUG00000011258	-	95	40.672
ENSIPUG00000006936	-	98	62.371	ENSIPUG00000021556	-	98	62.189
ENSIPUG00000006936	-	95	46.610	ENSIPUG00000004803	si:ch211-154o6.2	53	46.610
ENSIPUG00000006936	-	97	60.700	ENSIPUG00000022741	-	79	60.870
ENSIPUG00000006936	-	99	56.497	ENSIPUG00000017575	-	61	61.765
ENSIPUG00000006936	-	88	35.714	ENSIPUG00000000131	snai2	78	35.714
ENSIPUG00000006936	-	76	47.059	ENSIPUG00000005547	-	50	47.059
ENSIPUG00000006936	-	78	50.000	ENSIPUG00000011399	zbtb47b	81	39.474
ENSIPUG00000006936	-	99	61.751	ENSIPUG00000015400	-	96	65.041
ENSIPUG00000006936	-	80	42.767	ENSIPUG00000012769	gfi1b	51	44.371
ENSIPUG00000006936	-	99	53.488	ENSIPUG00000015177	-	68	52.727
ENSIPUG00000006936	-	93	61.509	ENSIPUG00000015233	-	77	61.509
ENSIPUG00000006936	-	96	30.539	ENSIPUG00000015037	znf711	51	33.193
ENSIPUG00000006936	-	95	48.235	ENSIPUG00000013315	-	99	53.390
ENSIPUG00000006936	-	98	59.770	ENSIPUG00000021434	-	96	56.627
ENSIPUG00000006936	-	96	34.416	ENSIPUG00000018102	znf646	73	33.473
ENSIPUG00000006936	-	96	62.632	ENSIPUG00000015121	-	71	62.632
ENSIPUG00000006936	-	77	41.304	ENSIPUG00000009577	-	50	38.298
ENSIPUG00000006936	-	93	31.013	ENSIPUG00000015844	snai1b	60	31.792
ENSIPUG00000006936	-	97	62.948	ENSIPUG00000023688	-	98	56.225
ENSIPUG00000006936	-	97	61.338	ENSIPUG00000016075	-	98	67.021
ENSIPUG00000006936	-	97	55.155	ENSIPUG00000023761	-	93	55.155
ENSIPUG00000006936	-	91	36.943	ENSIPUG00000021407	-	52	40.000
ENSIPUG00000006936	-	97	55.020	ENSIPUG00000021441	-	97	58.108
ENSIPUG00000006936	-	95	51.568	ENSIPUG00000004428	-	91	51.568
ENSIPUG00000006936	-	84	38.136	ENSIPUG00000024011	-	53	38.136
ENSIPUG00000006936	-	97	68.376	ENSIPUG00000015468	-	96	66.939
ENSIPUG00000006936	-	79	49.438	ENSIPUG00000020760	-	53	49.438
ENSIPUG00000006936	-	73	35.260	ENSIPUG00000024004	-	82	31.915
ENSIPUG00000006936	-	93	38.017	ENSIPUG00000001248	prdm5	73	39.810
ENSIPUG00000006936	-	98	40.642	ENSIPUG00000007076	-	89	47.692
ENSIPUG00000006936	-	92	33.775	ENSIPUG00000002075	znf341	52	33.775
ENSIPUG00000006936	-	80	43.262	ENSIPUG00000012830	-	79	44.330
ENSIPUG00000006936	-	93	61.333	ENSIPUG00000003960	-	84	58.525
ENSIPUG00000006936	-	91	62.016	ENSIPUG00000021527	-	95	62.016
ENSIPUG00000006936	-	99	42.529	ENSIPUG00000019205	-	74	43.172
ENSIPUG00000006936	-	97	60.674	ENSIPUG00000013065	-	94	60.674
ENSIPUG00000006936	-	91	60.417	ENSIPUG00000021472	-	89	60.000
ENSIPUG00000006936	-	76	55.932	ENSIPUG00000014394	si:dkey-7l6.3	53	55.932
ENSIPUG00000006936	-	97	60.417	ENSIPUG00000012960	-	90	60.714
ENSIPUG00000006936	-	76	49.020	ENSIPUG00000004551	scrt1a	53	39.535
ENSIPUG00000006936	-	78	62.992	ENSIPUG00000005339	-	83	63.025
ENSIPUG00000006936	-	99	49.807	ENSIPUG00000015203	-	65	50.350
ENSIPUG00000006936	-	94	56.890	ENSIPUG00000021518	-	96	56.923
ENSIPUG00000006936	-	93	58.571	ENSIPUG00000021515	-	88	60.538
ENSIPUG00000006936	-	99	59.901	ENSIPUG00000007934	-	98	59.735
ENSIPUG00000006936	-	95	42.759	ENSIPUG00000011652	znf648	79	42.759
ENSIPUG00000006936	-	93	47.020	ENSIPUG00000013414	GFI1	67	44.025
ENSIPUG00000006936	-	99	60.465	ENSIPUG00000023635	-	94	60.227
ENSIPUG00000006936	-	96	58.723	ENSIPUG00000009750	-	94	58.723
ENSIPUG00000006936	-	93	58.553	ENSIPUG00000005581	-	74	57.676
ENSIPUG00000006936	-	97	58.020	ENSIPUG00000006916	-	86	63.968
ENSIPUG00000006936	-	97	61.735	ENSIPUG00000022751	-	98	59.184
ENSIPUG00000006936	-	93	51.724	ENSIPUG00000004905	znf236	63	51.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000006936	-	91	53.125	ENSACIG00000019791	-	92	51.562	Amphilophus_citrinellus
ENSIPUG00000006936	-	97	53.488	ENSACIG00000011153	-	76	53.488	Amphilophus_citrinellus
ENSIPUG00000006936	-	89	50.242	ENSANAG00000032414	-	96	50.242	Aotus_nancymaae
ENSIPUG00000006936	-	97	45.349	ENSACLG00000014167	-	63	43.243	Astatotilapia_calliptera
ENSIPUG00000006936	-	96	49.749	ENSACLG00000017329	-	85	49.749	Astatotilapia_calliptera
ENSIPUG00000006936	-	91	45.729	ENSACLG00000020474	-	89	45.783	Astatotilapia_calliptera
ENSIPUG00000006936	-	95	51.562	ENSACLG00000001507	-	81	51.208	Astatotilapia_calliptera
ENSIPUG00000006936	-	97	44.490	ENSACLG00000022499	-	94	44.490	Astatotilapia_calliptera
ENSIPUG00000006936	-	96	54.118	ENSAMXG00000039770	-	90	54.229	Astyanax_mexicanus
ENSIPUG00000006936	-	96	59.729	ENSAMXG00000038324	-	80	59.729	Astyanax_mexicanus
ENSIPUG00000006936	-	83	64.286	ENSAMXG00000031646	-	99	61.161	Astyanax_mexicanus
ENSIPUG00000006936	-	97	59.864	ENSAMXG00000039162	-	98	61.504	Astyanax_mexicanus
ENSIPUG00000006936	-	98	59.500	ENSAMXG00000031844	-	93	59.500	Astyanax_mexicanus
ENSIPUG00000006936	-	90	66.129	ENSAMXG00000010078	-	94	66.129	Astyanax_mexicanus
ENSIPUG00000006936	-	95	63.598	ENSAMXG00000031501	-	92	62.007	Astyanax_mexicanus
ENSIPUG00000006936	-	97	60.956	ENSAMXG00000036849	-	87	62.185	Astyanax_mexicanus
ENSIPUG00000006936	-	90	43.719	ENSCHIG00000015741	-	98	44.828	Capra_hircus
ENSIPUG00000006936	-	80	51.273	ENSCCAG00000035188	-	84	52.857	Cebus_capucinus
ENSIPUG00000006936	-	83	51.064	ENSCPBG00000001258	-	94	52.601	Chrysemys_picta_bellii
ENSIPUG00000006936	-	86	47.440	ENSDNOG00000048084	-	99	47.440	Dasypus_novemcinctus
ENSIPUG00000006936	-	80	43.089	ENSETEG00000002865	-	82	45.763	Echinops_telfairi
ENSIPUG00000006936	-	97	53.846	ENSEBUG00000008157	-	97	49.789	Eptatretus_burgeri
ENSIPUG00000006936	-	91	50.000	ENSEBUG00000012748	-	75	48.443	Eptatretus_burgeri
ENSIPUG00000006936	-	98	39.834	ENSEBUG00000011582	-	79	40.800	Eptatretus_burgeri
ENSIPUG00000006936	-	95	53.175	ENSEBUG00000011479	-	79	53.175	Eptatretus_burgeri
ENSIPUG00000006936	-	95	50.455	ENSECAG00000035557	-	84	47.895	Equus_caballus
ENSIPUG00000006936	-	92	46.073	ENSFHEG00000016184	-	73	46.073	Fundulus_heteroclitus
ENSIPUG00000006936	-	95	39.259	ENSGMOG00000004315	-	95	43.111	Gadus_morhua
ENSIPUG00000006936	-	97	39.370	ENSGACG00000019863	-	99	40.698	Gasterosteus_aculeatus
ENSIPUG00000006936	-	78	58.235	ENSGAGG00000007230	-	83	58.235	Gopherus_agassizii
ENSIPUG00000006936	-	85	52.500	ENSGAGG00000013851	-	72	54.955	Gopherus_agassizii
ENSIPUG00000006936	-	95	48.352	ENSHBUG00000017372	-	89	48.352	Haplochromis_burtoni
ENSIPUG00000006936	-	98	44.915	ENSHBUG00000013264	-	87	44.915	Haplochromis_burtoni
ENSIPUG00000006936	-	95	45.652	ENSHBUG00000021028	-	84	44.828	Haplochromis_burtoni
ENSIPUG00000006936	-	92	47.895	ENSHBUG00000006238	-	98	47.895	Haplochromis_burtoni
ENSIPUG00000006936	-	79	45.665	ENSHBUG00000019800	-	94	45.665	Haplochromis_burtoni
ENSIPUG00000006936	-	84	48.571	ENSHBUG00000000146	-	78	50.794	Haplochromis_burtoni
ENSIPUG00000006936	-	81	50.424	ENSHGLG00000018394	-	96	50.424	Heterocephalus_glaber_female
ENSIPUG00000006936	-	96	47.414	ENSSTOG00000034297	-	75	48.450	Ictidomys_tridecemlineatus
ENSIPUG00000006936	-	80	52.510	ENSMFAG00000046052	-	85	54.194	Macaca_fascicularis
ENSIPUG00000006936	-	80	52.529	ENSMNEG00000041636	-	85	54.194	Macaca_nemestrina
ENSIPUG00000006936	-	80	52.510	ENSMLEG00000032640	-	85	54.194	Mandrillus_leucophaeus
ENSIPUG00000006936	-	97	43.913	ENSMAMG00000009051	-	94	45.455	Mastacembelus_armatus
ENSIPUG00000006936	-	97	46.875	ENSMZEG00005027285	-	91	46.341	Maylandia_zebra
ENSIPUG00000006936	-	97	48.790	ENSMZEG00005012737	-	83	49.246	Maylandia_zebra
ENSIPUG00000006936	-	97	45.665	ENSMZEG00005020736	-	96	45.665	Maylandia_zebra
ENSIPUG00000006936	-	94	50.777	ENSMZEG00005021421	-	96	50.777	Maylandia_zebra
ENSIPUG00000006936	-	98	46.632	ENSMZEG00005027950	-	92	46.734	Maylandia_zebra
ENSIPUG00000006936	-	92	43.902	ENSMZEG00005019982	-	97	43.697	Maylandia_zebra
ENSIPUG00000006936	-	95	55.446	ENSMALG00000004413	-	96	55.446	Monopterus_albus
ENSIPUG00000006936	-	97	40.741	ENSNBRG00000016603	-	93	42.342	Neolamprologus_brichardi
ENSIPUG00000006936	-	93	51.323	ENSNBRG00000013604	-	75	51.323	Neolamprologus_brichardi
ENSIPUG00000006936	-	97	50.000	ENSNBRG00000015873	-	99	52.041	Neolamprologus_brichardi
ENSIPUG00000006936	-	93	45.673	ENSNBRG00000016582	-	85	45.673	Neolamprologus_brichardi
ENSIPUG00000006936	-	97	43.644	ENSNBRG00000015652	-	94	43.644	Neolamprologus_brichardi
ENSIPUG00000006936	-	91	49.761	ENSONIG00000021124	-	99	46.186	Oreochromis_niloticus
ENSIPUG00000006936	-	97	46.341	ENSONIG00000000093	-	99	46.341	Oreochromis_niloticus
ENSIPUG00000006936	-	98	38.314	ENSONIG00000001834	-	100	40.000	Oreochromis_niloticus
ENSIPUG00000006936	-	96	48.529	ENSONIG00000000122	-	99	48.529	Oreochromis_niloticus
ENSIPUG00000006936	-	97	45.405	ENSONIG00000008953	-	96	45.405	Oreochromis_niloticus
ENSIPUG00000006936	-	98	49.057	ENSONIG00000015166	-	100	49.057	Oreochromis_niloticus
ENSIPUG00000006936	-	93	47.097	ENSONIG00000007931	-	88	44.785	Oreochromis_niloticus
ENSIPUG00000006936	-	97	50.000	ENSONIG00000020516	-	100	49.474	Oreochromis_niloticus
ENSIPUG00000006936	-	97	44.000	ENSORLG00015012951	-	84	45.588	Oryzias_latipes_hsok
ENSIPUG00000006936	-	93	52.344	ENSOGAG00000025289	-	90	52.427	Otolemur_garnettii
ENSIPUG00000006936	-	80	52.510	ENSPANG00000030978	-	89	54.028	Papio_anubis
ENSIPUG00000006936	-	84	48.106	ENSPEMG00000016975	Zfp940	78	48.106	Peromyscus_maniculatus_bairdii
ENSIPUG00000006936	-	99	47.984	ENSPMEG00000004595	-	99	45.798	Poecilia_mexicana
ENSIPUG00000006936	-	92	57.529	ENSPPYG00000009906	-	70	61.143	Pongo_abelii
ENSIPUG00000006936	-	99	44.269	ENSPNYG00000024244	-	85	45.771	Pundamilia_nyererei
ENSIPUG00000006936	-	95	62.500	ENSPNAG00000011625	-	93	62.500	Pygocentrus_nattereri
ENSIPUG00000006936	-	97	55.426	ENSPNAG00000019338	-	97	58.333	Pygocentrus_nattereri
ENSIPUG00000006936	-	80	52.896	ENSSBOG00000029728	-	85	54.194	Saimiri_boliviensis_boliviensis
ENSIPUG00000006936	-	95	53.571	ENSSPUG00000010059	-	85	53.571	Sphenodon_punctatus