EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007016 (Gene tree)
Gene ID: 108254969
Gene Symbol: arf4
Alias: zgc:101030|zgc:174360
Full Name: ADP-ribosylation factor 4
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 10720 bases
Position: chr21:13408780-13419499
Accession: 108254969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000010385	MMR_HSR1	PF01926.23	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010832	-	6354	XM_017450513	ENSIPUP00000010385	180 (aa)	XP_017306002	W5UL15
ENSIPUT00000010844	-	471	-	ENSIPUP00000010397	156 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000007016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007016	arf4	100	92.222	ENSIPUG00000004215	arf5	100	92.222
ENSIPUG00000007016	arf4	92	36.571	ENSIPUG00000024239	ARL6	90	36.571
ENSIPUG00000007016	arf4	94	33.516	ENSIPUG00000024487	arfrp1	89	33.516
ENSIPUG00000007016	arf4	91	47.337	ENSIPUG00000019342	Arl4d	85	47.337
ENSIPUG00000007016	arf4	100	92.778	ENSIPUG00000004159	Arf5	100	92.778
ENSIPUG00000007016	arf4	100	45.556	ENSIPUG00000021388	arl5a	100	45.556
ENSIPUG00000007016	arf4	92	43.636	ENSIPUG00000008227	arl3	91	43.636
ENSIPUG00000007016	arf4	94	43.529	ENSIPUG00000020426	arl11	94	43.529
ENSIPUG00000007016	arf4	100	73.889	ENSIPUG00000006913	-	70	73.889
ENSIPUG00000007016	arf4	98	58.523	ENSIPUG00000013834	arl1	95	58.523
ENSIPUG00000007016	arf4	97	43.750	ENSIPUG00000019792	arl3l1	94	43.750
ENSIPUG00000007016	arf4	52	35.484	ENSIPUG00000024669	SAR1B	71	35.484
ENSIPUG00000007016	arf4	96	46.629	ENSIPUG00000002122	arl4cb	93	46.629
ENSIPUG00000007016	arf4	100	81.111	ENSIPUG00000007829	arf3a	99	81.111
ENSIPUG00000007016	arf4	94	31.176	ENSIPUG00000000931	arl8ba	91	31.176
ENSIPUG00000007016	arf4	100	81.111	ENSIPUG00000023431	arf3b	99	81.111
ENSIPUG00000007016	arf4	100	43.889	ENSIPUG00000006168	arl5b	100	44.848
ENSIPUG00000007016	arf4	92	48.538	ENSIPUG00000006298	-	89	48.538
ENSIPUG00000007016	arf4	98	46.893	ENSIPUG00000023232	arl5c	98	46.893
ENSIPUG00000007016	arf4	96	30.058	ENSIPUG00000021761	arl8bb	93	30.058
ENSIPUG00000007016	arf4	100	82.222	ENSIPUG00000000108	Arf2	99	82.222
ENSIPUG00000007016	arf4	52	35.484	ENSIPUG00000010046	sar1b	66	35.484
ENSIPUG00000007016	arf4	96	46.111	ENSIPUG00000021618	arl4ab	93	46.111
ENSIPUG00000007016	arf4	97	45.304	ENSIPUG00000024159	arl4a	91	45.304
ENSIPUG00000007016	arf4	92	46.108	ENSIPUG00000003931	arl2	90	46.108
ENSIPUG00000007016	arf4	98	84.181	ENSIPUG00000011737	arf1	98	84.181
ENSIPUG00000007016	arf4	78	31.373	ENSIPUG00000004177	srprb	53	32.374
ENSIPUG00000007016	arf4	92	44.242	ENSIPUG00000015451	arl3	95	44.242
ENSIPUG00000007016	arf4	87	66.879	ENSIPUG00000020344	-	98	66.879
ENSIPUG00000007016	arf4	100	82.222	ENSIPUG00000006311	arf1	99	82.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007016	arf4	100	92.222	ENSG00000004059	ARF5	100	92.222	Homo_sapiens
ENSIPUG00000007016	arf4	99	87.151	ENSAPOG00000000667	-	99	87.151	Acanthochromis_polyacanthus
ENSIPUG00000007016	arf4	100	92.222	ENSAMEG00000004635	ARF5	100	92.222	Ailuropoda_melanoleuca
ENSIPUG00000007016	arf4	100	71.111	ENSACIG00000014610	zgc:110286	100	71.111	Amphilophus_citrinellus
ENSIPUG00000007016	arf4	99	88.827	ENSACIG00000000467	-	99	88.827	Amphilophus_citrinellus
ENSIPUG00000007016	arf4	100	91.667	ENSACIG00000005843	arf5	100	91.667	Amphilophus_citrinellus
ENSIPUG00000007016	arf4	100	90.000	ENSAOCG00000023329	arf5	100	90.000	Amphiprion_ocellaris
ENSIPUG00000007016	arf4	99	85.475	ENSAOCG00000008113	-	99	85.475	Amphiprion_ocellaris
ENSIPUG00000007016	arf4	100	90.000	ENSAPEG00000024614	arf5	100	90.000	Amphiprion_percula
ENSIPUG00000007016	arf4	99	85.475	ENSAPEG00000003087	-	99	85.475	Amphiprion_percula
ENSIPUG00000007016	arf4	100	91.111	ENSATEG00000003053	ARF5	100	91.111	Anabas_testudineus
ENSIPUG00000007016	arf4	99	87.709	ENSATEG00000001302	-	99	87.709	Anabas_testudineus
ENSIPUG00000007016	arf4	100	92.222	ENSANAG00000026446	ARF5	100	92.222	Aotus_nancymaae
ENSIPUG00000007016	arf4	99	88.268	ENSACLG00000025604	-	99	88.268	Astatotilapia_calliptera
ENSIPUG00000007016	arf4	100	92.222	ENSACLG00000005705	arf5	100	92.222	Astatotilapia_calliptera
ENSIPUG00000007016	arf4	100	94.444	ENSAMXG00000038224	-	100	94.444	Astyanax_mexicanus
ENSIPUG00000007016	arf4	100	97.778	ENSAMXG00000031467	arf4a	100	97.778	Astyanax_mexicanus
ENSIPUG00000007016	arf4	100	95.000	ENSAMXG00000004249	-	100	95.000	Astyanax_mexicanus
ENSIPUG00000007016	arf4	100	91.667	ENSAMXG00000031774	ARF5	100	91.667	Astyanax_mexicanus
ENSIPUG00000007016	arf4	100	92.222	ENSBTAG00000009366	ARF5	100	92.222	Bos_taurus
ENSIPUG00000007016	arf4	99	87.709	WBGene00000183	arf-3	99	87.709	Caenorhabditis_elegans
ENSIPUG00000007016	arf4	100	92.222	ENSCJAG00000017604	ARF5	100	92.222	Callithrix_jacchus
ENSIPUG00000007016	arf4	100	77.570	ENSCAFG00020021629	ARF5	100	77.570	Canis_lupus_dingo
ENSIPUG00000007016	arf4	100	92.222	ENSCHIG00000018906	ARF5	100	92.222	Capra_hircus
ENSIPUG00000007016	arf4	100	89.503	ENSCPOG00000006239	ARF5	100	89.503	Cavia_porcellus
ENSIPUG00000007016	arf4	100	92.222	ENSCCAG00000027943	-	100	92.222	Cebus_capucinus
ENSIPUG00000007016	arf4	100	92.222	ENSCATG00000010217	ARF5	100	92.222	Cercocebus_atys
ENSIPUG00000007016	arf4	100	92.222	ENSCLAG00000007930	ARF5	100	92.222	Chinchilla_lanigera
ENSIPUG00000007016	arf4	100	92.222	ENSCSAG00000010208	ARF5	100	92.222	Chlorocebus_sabaeus
ENSIPUG00000007016	arf4	99	78.212	ENSCING00000004846	-	99	78.212	Ciona_intestinalis
ENSIPUG00000007016	arf4	99	75.691	ENSCSAVG00000001959	-	99	75.691	Ciona_savignyi
ENSIPUG00000007016	arf4	89	91.925	ENSCANG00000037234	ARF5	98	91.925	Colobus_angolensis_palliatus
ENSIPUG00000007016	arf4	100	92.222	ENSCGRG00001024919	Arf5	100	92.222	Cricetulus_griseus_chok1gshd
ENSIPUG00000007016	arf4	100	88.333	ENSCSEG00000006004	arf5	100	88.333	Cynoglossus_semilaevis
ENSIPUG00000007016	arf4	100	92.222	ENSCVAG00000009124	ARF5	100	92.222	Cyprinodon_variegatus
ENSIPUG00000007016	arf4	100	92.222	ENSCVAG00000007314	-	100	92.222	Cyprinodon_variegatus
ENSIPUG00000007016	arf4	99	88.827	ENSCVAG00000011381	-	99	88.827	Cyprinodon_variegatus
ENSIPUG00000007016	arf4	100	72.928	ENSDARG00000074210	ARF5	89	72.928	Danio_rerio
ENSIPUG00000007016	arf4	100	94.444	ENSDARG00000070472	arf5	100	94.444	Danio_rerio
ENSIPUG00000007016	arf4	100	95.000	ENSDARG00000113899	zgc:77650	100	95.000	Danio_rerio
ENSIPUG00000007016	arf4	100	96.667	ENSDARG00000045989	arf4a	100	96.667	Danio_rerio
ENSIPUG00000007016	arf4	100	92.222	ENSDORG00000000325	Arf5	100	92.222	Dipodomys_ordii
ENSIPUG00000007016	arf4	100	86.111	FBgn0013749	Arf102F	100	86.111	Drosophila_melanogaster
ENSIPUG00000007016	arf4	97	89.143	ENSETEG00000009275	ARF5	100	89.143	Echinops_telfairi
ENSIPUG00000007016	arf4	100	85.556	ENSEBUG00000014420	-	100	85.556	Eptatretus_burgeri
ENSIPUG00000007016	arf4	99	70.391	ENSEBUG00000004484	-	99	70.391	Eptatretus_burgeri
ENSIPUG00000007016	arf4	99	75.419	ENSELUG00000014428	arf4	99	75.419	Esox_lucius
ENSIPUG00000007016	arf4	100	92.222	ENSFCAG00000005482	ARF5	100	92.222	Felis_catus
ENSIPUG00000007016	arf4	100	91.667	ENSFHEG00000023119	arf5	100	91.667	Fundulus_heteroclitus
ENSIPUG00000007016	arf4	100	88.889	ENSGMOG00000019109	-	99	88.889	Gadus_morhua
ENSIPUG00000007016	arf4	100	87.222	ENSGMOG00000008747	arf5	100	87.222	Gadus_morhua
ENSIPUG00000007016	arf4	99	87.709	ENSGAFG00000005163	-	99	87.709	Gambusia_affinis
ENSIPUG00000007016	arf4	100	92.222	ENSGAFG00000018703	arf5	100	92.222	Gambusia_affinis
ENSIPUG00000007016	arf4	100	90.000	ENSGACG00000000686	arf5	100	90.000	Gasterosteus_aculeatus
ENSIPUG00000007016	arf4	99	86.034	ENSGACG00000012500	-	99	86.034	Gasterosteus_aculeatus
ENSIPUG00000007016	arf4	100	93.333	ENSGAGG00000000231	ARF5	100	93.333	Gopherus_agassizii
ENSIPUG00000007016	arf4	100	92.222	ENSGGOG00000016749	ARF5	100	92.222	Gorilla_gorilla
ENSIPUG00000007016	arf4	100	92.222	ENSHBUG00000008546	arf5	100	92.222	Haplochromis_burtoni
ENSIPUG00000007016	arf4	99	88.268	ENSHBUG00000011041	-	99	88.268	Haplochromis_burtoni
ENSIPUG00000007016	arf4	100	92.222	ENSHGLG00000007494	ARF5	100	92.222	Heterocephalus_glaber_female
ENSIPUG00000007016	arf4	100	91.667	ENSHGLG00100006040	ARF5	60	91.667	Heterocephalus_glaber_male
ENSIPUG00000007016	arf4	99	85.475	ENSHCOG00000015577	-	100	85.475	Hippocampus_comes
ENSIPUG00000007016	arf4	100	92.222	ENSSTOG00000002104	ARF5	100	92.222	Ictidomys_tridecemlineatus
ENSIPUG00000007016	arf4	100	92.222	ENSJJAG00000005105	Arf5	100	92.222	Jaculus_jaculus
ENSIPUG00000007016	arf4	99	88.827	ENSKMAG00000012816	-	99	88.827	Kryptolebias_marmoratus
ENSIPUG00000007016	arf4	100	85.000	ENSLBEG00000012002	-	99	85.000	Labrus_bergylta
ENSIPUG00000007016	arf4	100	91.111	ENSLBEG00000026532	arf5	100	91.111	Labrus_bergylta
ENSIPUG00000007016	arf4	100	92.222	ENSLAFG00000011469	ARF5	100	92.222	Loxodonta_africana
ENSIPUG00000007016	arf4	100	92.222	ENSMFAG00000019772	ARF5	100	92.222	Macaca_fascicularis
ENSIPUG00000007016	arf4	100	92.222	ENSMMUG00000046381	ARF5	100	92.222	Macaca_mulatta
ENSIPUG00000007016	arf4	100	92.222	ENSMNEG00000040893	ARF5	100	92.222	Macaca_nemestrina
ENSIPUG00000007016	arf4	100	90.556	ENSMAMG00000021160	arf5	100	90.556	Mastacembelus_armatus
ENSIPUG00000007016	arf4	99	88.268	ENSMAMG00000008223	-	99	88.268	Mastacembelus_armatus
ENSIPUG00000007016	arf4	87	87.898	ENSMZEG00005019741	-	93	87.898	Maylandia_zebra
ENSIPUG00000007016	arf4	100	92.222	ENSMZEG00005015033	arf5	67	92.222	Maylandia_zebra
ENSIPUG00000007016	arf4	100	92.222	ENSMAUG00000014825	Arf5	100	92.222	Mesocricetus_auratus
ENSIPUG00000007016	arf4	100	92.222	ENSMICG00000000091	ARF5	100	92.222	Microcebus_murinus
ENSIPUG00000007016	arf4	100	92.222	ENSMOCG00000022861	Arf5	100	92.222	Microtus_ochrogaster
ENSIPUG00000007016	arf4	100	91.667	ENSMODG00000015229	ARF5	100	91.667	Monodelphis_domestica
ENSIPUG00000007016	arf4	99	70.391	ENSMALG00000022638	zgc:110286	100	70.391	Monopterus_albus
ENSIPUG00000007016	arf4	99	88.827	ENSMALG00000006020	-	99	88.827	Monopterus_albus
ENSIPUG00000007016	arf4	100	91.111	ENSMALG00000010117	-	100	91.111	Monopterus_albus
ENSIPUG00000007016	arf4	100	92.222	MGP_CAROLIEiJ_G0028156	Arf5	100	92.222	Mus_caroli
ENSIPUG00000007016	arf4	100	92.222	ENSMUSG00000020440	Arf5	100	92.222	Mus_musculus
ENSIPUG00000007016	arf4	100	92.222	MGP_PahariEiJ_G0021914	Arf5	100	92.222	Mus_pahari
ENSIPUG00000007016	arf4	100	92.222	MGP_SPRETEiJ_G0029156	Arf5	100	92.222	Mus_spretus
ENSIPUG00000007016	arf4	100	92.222	ENSMPUG00000006675	ARF5	100	92.222	Mustela_putorius_furo
ENSIPUG00000007016	arf4	100	92.222	ENSMLUG00000017122	ARF5	100	92.222	Myotis_lucifugus
ENSIPUG00000007016	arf4	100	92.222	ENSNGAG00000011743	Arf5	100	92.222	Nannospalax_galili
ENSIPUG00000007016	arf4	100	92.222	ENSNBRG00000018854	arf5	100	92.222	Neolamprologus_brichardi
ENSIPUG00000007016	arf4	100	92.222	ENSODEG00000011800	ARF5	100	92.222	Octodon_degus
ENSIPUG00000007016	arf4	99	88.268	ENSONIG00000014890	-	99	88.268	Oreochromis_niloticus
ENSIPUG00000007016	arf4	100	92.222	ENSONIG00000007594	arf5	100	92.222	Oreochromis_niloticus
ENSIPUG00000007016	arf4	100	92.222	ENSOCUG00000024365	ARF5	100	92.222	Oryctolagus_cuniculus
ENSIPUG00000007016	arf4	99	88.268	ENSORLG00020001755	-	99	88.268	Oryzias_latipes_hni
ENSIPUG00000007016	arf4	100	91.667	ENSOMEG00000020821	ARF5	100	91.667	Oryzias_melastigma
ENSIPUG00000007016	arf4	99	88.268	ENSOMEG00000000211	-	64	88.268	Oryzias_melastigma
ENSIPUG00000007016	arf4	100	92.222	ENSOGAG00000013336	ARF5	100	92.222	Otolemur_garnettii
ENSIPUG00000007016	arf4	100	92.222	ENSPPAG00000037755	ARF5	100	92.222	Pan_paniscus
ENSIPUG00000007016	arf4	100	92.222	ENSPPRG00000004674	ARF5	100	92.222	Panthera_pardus
ENSIPUG00000007016	arf4	100	92.222	ENSPTRG00000019651	ARF5	100	92.222	Pan_troglodytes
ENSIPUG00000007016	arf4	100	92.222	ENSPANG00000032970	ARF5	100	92.222	Papio_anubis
ENSIPUG00000007016	arf4	100	97.778	ENSPKIG00000025349	arf4a	100	97.778	Paramormyrops_kingsleyae
ENSIPUG00000007016	arf4	100	92.222	ENSPKIG00000025381	-	100	92.222	Paramormyrops_kingsleyae
ENSIPUG00000007016	arf4	100	91.111	ENSPKIG00000013814	-	100	91.111	Paramormyrops_kingsleyae
ENSIPUG00000007016	arf4	100	87.222	ENSPMGG00000009985	-	100	87.222	Periophthalmus_magnuspinnatus
ENSIPUG00000007016	arf4	100	92.222	ENSPEMG00000021476	Arf5	100	92.222	Peromyscus_maniculatus_bairdii
ENSIPUG00000007016	arf4	99	83.799	ENSPMAG00000009600	arf4a	100	83.799	Petromyzon_marinus
ENSIPUG00000007016	arf4	99	87.222	ENSPFOG00000017992	-	99	87.222	Poecilia_formosa
ENSIPUG00000007016	arf4	100	92.222	ENSPFOG00000015817	arf5	100	92.222	Poecilia_formosa
ENSIPUG00000007016	arf4	99	87.709	ENSPLAG00000015630	-	99	87.709	Poecilia_latipinna
ENSIPUG00000007016	arf4	100	92.222	ENSPLAG00000006742	arf5	100	92.222	Poecilia_latipinna
ENSIPUG00000007016	arf4	99	87.709	ENSPMEG00000004624	-	99	87.709	Poecilia_mexicana
ENSIPUG00000007016	arf4	100	92.222	ENSPMEG00000009605	arf5	100	92.222	Poecilia_mexicana
ENSIPUG00000007016	arf4	100	92.222	ENSPCOG00000027640	ARF5	100	92.222	Propithecus_coquereli
ENSIPUG00000007016	arf4	100	92.222	ENSPVAG00000013940	ARF5	100	92.222	Pteropus_vampyrus
ENSIPUG00000007016	arf4	100	92.222	ENSPNYG00000001663	arf5	100	92.222	Pundamilia_nyererei
ENSIPUG00000007016	arf4	99	88.268	ENSPNYG00000004931	-	99	88.268	Pundamilia_nyererei
ENSIPUG00000007016	arf4	100	97.778	ENSPNAG00000004745	arf4a	100	97.778	Pygocentrus_nattereri
ENSIPUG00000007016	arf4	100	74.444	ENSPNAG00000004475	-	100	74.444	Pygocentrus_nattereri
ENSIPUG00000007016	arf4	100	75.556	ENSPNAG00000005054	-	100	75.556	Pygocentrus_nattereri
ENSIPUG00000007016	arf4	100	93.889	ENSPNAG00000024427	-	100	93.889	Pygocentrus_nattereri
ENSIPUG00000007016	arf4	100	92.222	ENSRNOG00000007806	Arf5	100	92.222	Rattus_norvegicus
ENSIPUG00000007016	arf4	100	92.222	ENSRBIG00000039868	ARF5	100	92.222	Rhinopithecus_bieti
ENSIPUG00000007016	arf4	100	92.222	ENSRROG00000041157	ARF5	100	92.222	Rhinopithecus_roxellana
ENSIPUG00000007016	arf4	100	92.222	ENSSBOG00000021669	ARF5	100	92.222	Saimiri_boliviensis_boliviensis
ENSIPUG00000007016	arf4	100	91.667	ENSSHAG00000015053	ARF5	100	91.667	Sarcophilus_harrisii
ENSIPUG00000007016	arf4	100	92.222	ENSSFOG00015020707	ARF5	100	92.222	Scleropages_formosus
ENSIPUG00000007016	arf4	100	81.111	ENSSFOG00015007701	-	100	81.111	Scleropages_formosus
ENSIPUG00000007016	arf4	99	84.916	ENSSMAG00000004541	-	99	84.916	Scophthalmus_maximus
ENSIPUG00000007016	arf4	100	90.556	ENSSMAG00000011361	arf5	100	90.556	Scophthalmus_maximus
ENSIPUG00000007016	arf4	100	91.111	ENSSDUG00000005105	arf5	100	91.111	Seriola_dumerili
ENSIPUG00000007016	arf4	100	91.111	ENSSLDG00000017188	arf5	100	91.111	Seriola_lalandi_dorsalis
ENSIPUG00000007016	arf4	99	88.268	ENSSPAG00000022680	-	99	88.268	Stegastes_partitus
ENSIPUG00000007016	arf4	100	90.556	ENSSPAG00000014434	arf5	100	90.556	Stegastes_partitus
ENSIPUG00000007016	arf4	100	92.222	ENSSSCG00000016593	ARF5	100	92.222	Sus_scrofa
ENSIPUG00000007016	arf4	99	84.916	ENSTRUG00000025462	-	100	84.916	Takifugu_rubripes
ENSIPUG00000007016	arf4	99	84.358	ENSTNIG00000017954	-	100	84.358	Tetraodon_nigroviridis
ENSIPUG00000007016	arf4	99	89.944	ENSTNIG00000003348	arf5	100	89.944	Tetraodon_nigroviridis
ENSIPUG00000007016	arf4	90	93.210	ENSTTRG00000006043	ARF5	100	93.210	Tursiops_truncatus
ENSIPUG00000007016	arf4	100	92.222	ENSUAMG00000012982	ARF5	100	92.222	Ursus_americanus
ENSIPUG00000007016	arf4	100	92.222	ENSVVUG00000007062	ARF5	100	92.222	Vulpes_vulpes
ENSIPUG00000007016	arf4	99	87.709	ENSXCOG00000020384	-	99	87.709	Xiphophorus_couchianus
ENSIPUG00000007016	arf4	100	92.222	ENSXMAG00000015306	arf5	100	92.222	Xiphophorus_maculatus
ENSIPUG00000007016	arf4	99	87.709	ENSXMAG00000004558	-	99	87.709	Xiphophorus_maculatus