EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007076 (Gene tree)
Gene ID: 108277487
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 883-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5724 bases
Position: chr17:17269902-17275625
Accession: 108277487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	1	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	2	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	3	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	4	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	5	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	6	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	7	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	8	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	9	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	10	11
ENSIPUP00000010360	zf-C2H2	PF00096.26	1.2e-55	11	11
ENSIPUP00000010354	zf-C2H2	PF00096.26	5.3e-24	1	6
ENSIPUP00000010354	zf-C2H2	PF00096.26	5.3e-24	2	6
ENSIPUP00000010354	zf-C2H2	PF00096.26	5.3e-24	3	6
ENSIPUP00000010354	zf-C2H2	PF00096.26	5.3e-24	4	6
ENSIPUP00000010354	zf-C2H2	PF00096.26	5.3e-24	5	6
ENSIPUP00000010354	zf-C2H2	PF00096.26	5.3e-24	6	6
ENSIPUP00000010360	zf-met	PF12874.7	4.5e-16	1	3
ENSIPUP00000010360	zf-met	PF12874.7	4.5e-16	2	3
ENSIPUP00000010360	zf-met	PF12874.7	4.5e-16	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010800	-	699	-	ENSIPUP00000010354	232 (aa)	-	-
ENSIPUT00000010807	-	2245	XM_017490289	ENSIPUP00000010360	656 (aa)	XP_017345778	A0A2D0SSV5

Gene Model

Click here to download ENSIPUG00000007076's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007076	-	99	39.535	ENSIPUG00000022751	-	99	40.138
ENSIPUG00000007076	-	96	43.548	ENSIPUG00000004905	znf236	82	42.708
ENSIPUG00000007076	-	94	35.407	ENSIPUG00000012109	ZN12	71	37.725
ENSIPUG00000007076	-	94	52.083	ENSIPUG00000002655	-	98	52.083
ENSIPUG00000007076	-	91	38.942	ENSIPUG00000005581	-	72	45.933
ENSIPUG00000007076	-	89	42.982	ENSIPUG00000012960	-	97	42.982
ENSIPUG00000007076	-	97	38.426	ENSIPUG00000015400	-	95	39.286
ENSIPUG00000007076	-	91	40.187	ENSIPUG00000007934	-	96	44.444
ENSIPUG00000007076	-	91	52.830	ENSIPUG00000022928	sall1b	56	46.429
ENSIPUG00000007076	-	94	38.596	ENSIPUG00000021484	-	99	44.538
ENSIPUG00000007076	-	91	47.368	ENSIPUG00000005733	-	79	48.101
ENSIPUG00000007076	-	91	40.426	ENSIPUG00000001248	prdm5	78	34.677
ENSIPUG00000007076	-	90	39.815	ENSIPUG00000021407	-	58	40.187
ENSIPUG00000007076	-	91	37.696	ENSIPUG00000015294	-	53	45.963
ENSIPUG00000007076	-	91	38.462	ENSIPUG00000001941	-	92	38.614
ENSIPUG00000007076	-	89	35.000	ENSIPUG00000019706	-	66	34.911
ENSIPUG00000007076	-	64	32.749	ENSIPUG00000024004	-	83	44.444
ENSIPUG00000007076	-	91	59.091	ENSIPUG00000021527	-	92	59.091
ENSIPUG00000007076	-	91	38.813	ENSIPUG00000023761	-	67	41.262
ENSIPUG00000007076	-	95	39.352	ENSIPUG00000011073	-	99	47.059
ENSIPUG00000007076	-	98	33.152	ENSIPUG00000005379	e4f1	54	41.333
ENSIPUG00000007076	-	91	37.255	ENSIPUG00000017653	patz1	58	41.333
ENSIPUG00000007076	-	96	39.241	ENSIPUG00000015233	-	72	40.157
ENSIPUG00000007076	-	90	38.298	ENSIPUG00000011399	zbtb47b	77	40.179
ENSIPUG00000007076	-	89	40.465	ENSIPUG00000009750	-	94	42.274
ENSIPUG00000007076	-	91	33.108	ENSIPUG00000012830	-	81	39.706
ENSIPUG00000007076	-	89	38.938	ENSIPUG00000013526	-	92	33.865
ENSIPUG00000007076	-	94	40.278	ENSIPUG00000006916	-	80	39.648
ENSIPUG00000007076	-	87	44.755	ENSIPUG00000022741	-	98	44.755
ENSIPUG00000007076	-	93	52.381	ENSIPUG00000017575	-	51	52.381
ENSIPUG00000007076	-	91	36.735	ENSIPUG00000004428	-	77	42.925
ENSIPUG00000007076	-	96	42.081	ENSIPUG00000013315	-	96	41.176
ENSIPUG00000007076	-	94	40.741	ENSIPUG00000015601	-	59	42.775
ENSIPUG00000007076	-	90	37.838	ENSIPUG00000015037	znf711	62	30.323
ENSIPUG00000007076	-	90	37.037	ENSIPUG00000004551	scrt1a	51	37.037
ENSIPUG00000007076	-	89	47.692	ENSIPUG00000006936	-	98	40.642
ENSIPUG00000007076	-	98	39.535	ENSIPUG00000016075	-	96	42.458
ENSIPUG00000007076	-	89	36.667	ENSIPUG00000003960	-	86	45.270
ENSIPUG00000007076	-	89	36.058	ENSIPUG00000021472	-	89	36.058
ENSIPUG00000007076	-	94	35.349	ENSIPUG00000019205	-	74	32.615
ENSIPUG00000007076	-	90	36.170	ENSIPUG00000005547	-	60	41.791
ENSIPUG00000007076	-	89	35.593	ENSIPUG00000024011	-	53	40.517
ENSIPUG00000007076	-	91	53.226	ENSIPUG00000023635	-	96	47.727
ENSIPUG00000007076	-	91	39.713	ENSIPUG00000021556	-	93	39.713
ENSIPUG00000007076	-	69	31.677	ENSIPUG00000015844	snai1b	86	30.573
ENSIPUG00000007076	-	93	38.182	ENSIPUG00000016009	znf596	87	40.237
ENSIPUG00000007076	-	99	38.750	ENSIPUG00000022266	ZNF135	95	38.519
ENSIPUG00000007076	-	67	38.636	ENSIPUG00000000131	snai2	51	38.060
ENSIPUG00000007076	-	91	39.819	ENSIPUG00000021998	-	99	39.819
ENSIPUG00000007076	-	94	34.559	ENSIPUG00000018102	znf646	77	33.333
ENSIPUG00000007076	-	91	36.585	ENSIPUG00000011652	znf648	79	40.397
ENSIPUG00000007076	-	90	39.007	ENSIPUG00000003040	zbtb47a	79	38.565
ENSIPUG00000007076	-	91	42.202	ENSIPUG00000013065	-	94	40.816
ENSIPUG00000007076	-	98	41.204	ENSIPUG00000023688	-	98	45.192
ENSIPUG00000007076	-	91	50.000	ENSIPUG00000005339	-	83	50.000
ENSIPUG00000007076	-	96	39.815	ENSIPUG00000021441	-	94	39.815
ENSIPUG00000007076	-	89	37.500	ENSIPUG00000015203	-	56	42.051
ENSIPUG00000007076	-	94	38.636	ENSIPUG00000015468	-	85	37.671
ENSIPUG00000007076	-	94	37.864	ENSIPUG00000021518	-	93	38.333
ENSIPUG00000007076	-	92	39.252	ENSIPUG00000021515	-	85	48.889
ENSIPUG00000007076	-	90	34.667	ENSIPUG00000008581	znf319b	89	34.667
ENSIPUG00000007076	-	89	39.535	ENSIPUG00000015121	-	60	44.211
ENSIPUG00000007076	-	91	38.605	ENSIPUG00000003011	-	56	41.935
ENSIPUG00000007076	-	96	40.741	ENSIPUG00000012769	gfi1b	65	40.397
ENSIPUG00000007076	-	91	33.790	ENSIPUG00000011258	-	86	34.667
ENSIPUG00000007076	-	94	39.815	ENSIPUG00000015177	-	66	39.815
ENSIPUG00000007076	-	90	42.857	ENSIPUG00000021434	-	97	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007076	-	97	36.842	ENSEBUG00000014667	-	76	39.949	Eptatretus_burgeri
ENSIPUG00000007076	-	92	35.135	ENSELUG00000002844	-	50	36.559	Esox_lucius
ENSIPUG00000007076	-	93	44.643	ENSFHEG00000011378	-	96	46.316	Fundulus_heteroclitus
ENSIPUG00000007076	-	93	40.146	ENSKMAG00000012934	-	96	40.146	Kryptolebias_marmoratus
ENSIPUG00000007076	-	91	39.450	ENSMMOG00000011221	-	93	36.842	Mola_mola
ENSIPUG00000007076	-	94	35.610	ENSOANG00000010666	-	81	40.000	Ornithorhynchus_anatinus
ENSIPUG00000007076	-	91	35.326	ENSORLG00000026463	-	60	31.515	Oryzias_latipes
ENSIPUG00000007076	-	91	41.615	ENSPLAG00000023496	-	88	38.356	Poecilia_latipinna
ENSIPUG00000007076	-	91	41.615	ENSPMEG00000014109	-	81	41.615	Poecilia_mexicana
ENSIPUG00000007076	-	93	38.889	ENSPNYG00000022227	-	69	33.705	Pundamilia_nyererei
ENSIPUG00000007076	-	95	40.972	ENSPNAG00000000303	-	80	40.206	Pygocentrus_nattereri
ENSIPUG00000007076	-	99	39.726	ENSPNAG00000010678	-	87	56.044	Pygocentrus_nattereri
ENSIPUG00000007076	-	91	45.833	ENSTRUG00000000995	-	76	42.857	Takifugu_rubripes