EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007082 (Gene tree)
Gene ID: 108272285
Gene Symbol: raver2
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 88792 bases
Position: chr11:8515383-8604174
Accession: 108272285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000010380	RRM_1	PF00076.22	7.7e-32	1	3
ENSIPUP00000010380	RRM_1	PF00076.22	7.7e-32	2	3
ENSIPUP00000010380	RRM_1	PF00076.22	7.7e-32	3	3
ENSIPUP00000010367	RRM_1	PF00076.22	1.5e-31	1	3
ENSIPUP00000010367	RRM_1	PF00076.22	1.5e-31	2	3
ENSIPUP00000010367	RRM_1	PF00076.22	1.5e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010814	-	2620	XM_017480606	ENSIPUP00000010367	807 (aa)	XP_017336095	A0A2D0S0X7
ENSIPUT00000010827	-	2532	-	ENSIPUP00000010380	675 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000007082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007082	raver2	51	55.587	ENSIPUG00000013153	raver1	60	62.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007082	raver2	81	51.712	ENSG00000162437	RAVER2	89	49.287	Homo_sapiens
ENSIPUG00000007082	raver2	100	62.222	ENSAPOG00000002766	raver2	100	63.041	Acanthochromis_polyacanthus
ENSIPUG00000007082	raver2	83	50.420	ENSAMEG00000015178	RAVER2	91	50.420	Ailuropoda_melanoleuca
ENSIPUG00000007082	raver2	85	64.912	ENSATEG00000019679	raver2	95	72.894	Anabas_testudineus
ENSIPUG00000007082	raver2	87	45.411	ENSAPLG00000013160	RAVER2	97	46.434	Anas_platyrhynchos
ENSIPUG00000007082	raver2	94	42.638	ENSACAG00000008443	RAVER2	98	42.894	Anolis_carolinensis
ENSIPUG00000007082	raver2	83	50.671	ENSANAG00000025857	RAVER2	85	50.671	Aotus_nancymaae
ENSIPUG00000007082	raver2	100	59.462	ENSACLG00000001840	raver2	100	59.462	Astatotilapia_calliptera
ENSIPUG00000007082	raver2	100	79.122	ENSAMXG00000010570	raver2	100	79.122	Astyanax_mexicanus
ENSIPUG00000007082	raver2	90	47.096	ENSBTAG00000030686	RAVER2	94	47.854	Bos_taurus
ENSIPUG00000007082	raver2	81	50.000	ENSCJAG00000016724	RAVER2	82	50.000	Callithrix_jacchus
ENSIPUG00000007082	raver2	79	45.098	ENSCAFG00000018617	RAVER2	96	45.276	Canis_familiaris
ENSIPUG00000007082	raver2	90	48.189	ENSCAFG00020018120	RAVER2	91	47.692	Canis_lupus_dingo
ENSIPUG00000007082	raver2	90	47.278	ENSCHIG00000005514	RAVER2	95	46.338	Capra_hircus
ENSIPUG00000007082	raver2	85	48.099	ENSTSYG00000006019	RAVER2	85	48.099	Carlito_syrichta
ENSIPUG00000007082	raver2	76	41.959	ENSCAPG00000013527	RAVER2	95	54.438	Cavia_aperea
ENSIPUG00000007082	raver2	79	44.502	ENSCPOG00000005986	RAVER2	90	44.991	Cavia_porcellus
ENSIPUG00000007082	raver2	81	50.427	ENSCCAG00000029834	RAVER2	82	50.427	Cebus_capucinus
ENSIPUG00000007082	raver2	81	50.772	ENSCATG00000040658	RAVER2	95	50.880	Cercocebus_atys
ENSIPUG00000007082	raver2	76	45.522	ENSCLAG00000006590	RAVER2	87	45.522	Chinchilla_lanigera
ENSIPUG00000007082	raver2	79	50.880	ENSCSAG00000001350	RAVER2	88	50.880	Chlorocebus_sabaeus
ENSIPUG00000007082	raver2	90	45.242	ENSCHOG00000007668	RAVER2	93	44.328	Choloepus_hoffmanni
ENSIPUG00000007082	raver2	86	48.377	ENSCPBG00000001015	RAVER2	89	47.983	Chrysemys_picta_bellii
ENSIPUG00000007082	raver2	81	50.259	ENSCANG00000042311	RAVER2	88	50.259	Colobus_angolensis_palliatus
ENSIPUG00000007082	raver2	81	50.514	ENSCGRG00001011852	Raver2	84	51.910	Cricetulus_griseus_chok1gshd
ENSIPUG00000007082	raver2	58	71.465	ENSCSEG00000017839	raver2	95	71.465	Cynoglossus_semilaevis
ENSIPUG00000007082	raver2	58	75.835	ENSCVAG00000002687	raver2	93	72.222	Cyprinodon_variegatus
ENSIPUG00000007082	raver2	100	73.452	ENSDARG00000075034	raver2	97	73.333	Danio_rerio
ENSIPUG00000007082	raver2	92	46.718	ENSDNOG00000012130	RAVER2	94	46.757	Dasypus_novemcinctus
ENSIPUG00000007082	raver2	79	50.987	ENSDORG00000002498	Raver2	77	50.987	Dipodomys_ordii
ENSIPUG00000007082	raver2	90	38.898	ENSETEG00000000706	RAVER2	98	38.898	Echinops_telfairi
ENSIPUG00000007082	raver2	81	50.523	ENSEASG00005008158	RAVER2	91	50.523	Equus_asinus_asinus
ENSIPUG00000007082	raver2	81	50.523	ENSECAG00000022014	RAVER2	91	50.523	Equus_caballus
ENSIPUG00000007082	raver2	74	66.667	ENSELUG00000022384	raver2	97	75.094	Esox_lucius
ENSIPUG00000007082	raver2	85	50.000	ENSFCAG00000022781	RAVER2	88	49.515	Felis_catus
ENSIPUG00000007082	raver2	81	46.392	ENSFALG00000012634	RAVER2	94	47.887	Ficedula_albicollis
ENSIPUG00000007082	raver2	79	46.306	ENSFDAG00000010721	RAVER2	88	46.306	Fukomys_damarensis
ENSIPUG00000007082	raver2	100	59.106	ENSFHEG00000001322	raver2	100	59.620	Fundulus_heteroclitus
ENSIPUG00000007082	raver2	67	76.151	ENSGMOG00000013535	raver2	77	76.987	Gadus_morhua
ENSIPUG00000007082	raver2	89	48.413	ENSGALG00000033759	RAVER2	81	48.418	Gallus_gallus
ENSIPUG00000007082	raver2	100	59.910	ENSGAFG00000008577	raver2	100	60.291	Gambusia_affinis
ENSIPUG00000007082	raver2	82	66.146	ENSGACG00000007122	raver2	98	64.892	Gasterosteus_aculeatus
ENSIPUG00000007082	raver2	84	48.185	ENSGAGG00000018767	RAVER2	95	47.401	Gopherus_agassizii
ENSIPUG00000007082	raver2	81	50.517	ENSGGOG00000016447	RAVER2	86	50.517	Gorilla_gorilla
ENSIPUG00000007082	raver2	100	59.462	ENSHBUG00000022983	raver2	100	59.462	Haplochromis_burtoni
ENSIPUG00000007082	raver2	78	48.624	ENSHGLG00000018409	RAVER2	83	48.624	Heterocephalus_glaber_female
ENSIPUG00000007082	raver2	72	47.535	ENSHGLG00100006640	RAVER2	94	58.610	Heterocephalus_glaber_male
ENSIPUG00000007082	raver2	100	57.449	ENSHCOG00000005933	raver2	100	57.432	Hippocampus_comes
ENSIPUG00000007082	raver2	62	53.699	ENSSTOG00000009844	RAVER2	99	53.699	Ictidomys_tridecemlineatus
ENSIPUG00000007082	raver2	83	50.086	ENSJJAG00000000374	Raver2	88	50.086	Jaculus_jaculus
ENSIPUG00000007082	raver2	76	54.106	ENSKMAG00000011656	raver2	100	54.839	Kryptolebias_marmoratus
ENSIPUG00000007082	raver2	50	79.586	ENSLBEG00000003778	raver2	89	79.351	Labrus_bergylta
ENSIPUG00000007082	raver2	88	44.648	ENSLACG00000005188	RAVER2	100	44.648	Latimeria_chalumnae
ENSIPUG00000007082	raver2	100	61.647	ENSLOCG00000006773	raver2	99	61.647	Lepisosteus_oculatus
ENSIPUG00000007082	raver2	85	47.841	ENSLAFG00000012508	RAVER2	97	47.841	Loxodonta_africana
ENSIPUG00000007082	raver2	80	51.379	ENSMFAG00000031436	RAVER2	87	49.909	Macaca_fascicularis
ENSIPUG00000007082	raver2	80	51.042	ENSMMUG00000018565	RAVER2	95	50.704	Macaca_mulatta
ENSIPUG00000007082	raver2	80	51.379	ENSMNEG00000033127	RAVER2	95	50.880	Macaca_nemestrina
ENSIPUG00000007082	raver2	76	49.817	ENSMLEG00000036310	RAVER2	87	49.817	Mandrillus_leucophaeus
ENSIPUG00000007082	raver2	58	77.635	ENSMAMG00000009059	raver2	84	77.635	Mastacembelus_armatus
ENSIPUG00000007082	raver2	100	59.462	ENSMZEG00005014386	raver2	100	59.462	Maylandia_zebra
ENSIPUG00000007082	raver2	85	47.421	ENSMGAG00000011806	RAVER2	97	47.421	Meleagris_gallopavo
ENSIPUG00000007082	raver2	81	49.147	ENSMAUG00000004248	Raver2	84	50.172	Mesocricetus_auratus
ENSIPUG00000007082	raver2	84	50.842	ENSMICG00000029259	RAVER2	83	50.842	Microcebus_murinus
ENSIPUG00000007082	raver2	81	47.619	ENSMOCG00000018087	Raver2	83	49.135	Microtus_ochrogaster
ENSIPUG00000007082	raver2	85	48.837	ENSMODG00000001242	RAVER2	91	46.851	Monodelphis_domestica
ENSIPUG00000007082	raver2	100	59.127	ENSMALG00000018093	raver2	96	59.330	Monopterus_albus
ENSIPUG00000007082	raver2	87	47.452	MGP_CAROLIEiJ_G0026202	Raver2	92	56.876	Mus_caroli
ENSIPUG00000007082	raver2	83	48.744	ENSMUSG00000035275	Raver2	92	57.110	Mus_musculus
ENSIPUG00000007082	raver2	87	47.368	MGP_PahariEiJ_G0028539	Raver2	92	57.042	Mus_pahari
ENSIPUG00000007082	raver2	87	47.452	MGP_SPRETEiJ_G0027171	Raver2	92	57.110	Mus_spretus
ENSIPUG00000007082	raver2	88	48.490	ENSMPUG00000000717	RAVER2	97	48.490	Mustela_putorius_furo
ENSIPUG00000007082	raver2	80	48.677	ENSMLUG00000007699	RAVER2	99	48.677	Myotis_lucifugus
ENSIPUG00000007082	raver2	81	50.775	ENSNGAG00000000905	Raver2	81	52.995	Nannospalax_galili
ENSIPUG00000007082	raver2	77	51.083	ENSNLEG00000015145	RAVER2	87	51.264	Nomascus_leucogenys
ENSIPUG00000007082	raver2	53	62.712	ENSOPRG00000016988	-	58	50.000	Ochotona_princeps
ENSIPUG00000007082	raver2	76	46.765	ENSODEG00000005253	RAVER2	84	46.765	Octodon_degus
ENSIPUG00000007082	raver2	77	59.475	ENSONIG00000008808	raver2	89	61.486	Oreochromis_niloticus
ENSIPUG00000007082	raver2	82	47.676	ENSOANG00000008327	-	95	47.676	Ornithorhynchus_anatinus
ENSIPUG00000007082	raver2	78	50.271	ENSOCUG00000006221	RAVER2	95	45.359	Oryctolagus_cuniculus
ENSIPUG00000007082	raver2	100	60.292	ENSORLG00000010073	raver2	100	60.742	Oryzias_latipes
ENSIPUG00000007082	raver2	100	60.112	ENSORLG00020010822	raver2	100	60.899	Oryzias_latipes_hni
ENSIPUG00000007082	raver2	50	81.065	ENSORLG00015000191	raver2	95	74.750	Oryzias_latipes_hsok
ENSIPUG00000007082	raver2	100	59.888	ENSOMEG00000007789	raver2	100	60.674	Oryzias_melastigma
ENSIPUG00000007082	raver2	75	48.188	ENSOGAG00000011157	RAVER2	87	48.188	Otolemur_garnettii
ENSIPUG00000007082	raver2	90	47.589	ENSOARG00000010030	RAVER2	94	46.786	Ovis_aries
ENSIPUG00000007082	raver2	81	51.541	ENSPPAG00000039189	RAVER2	85	51.541	Pan_paniscus
ENSIPUG00000007082	raver2	85	50.000	ENSPPRG00000023350	RAVER2	88	49.515	Panthera_pardus
ENSIPUG00000007082	raver2	80	49.033	ENSPTIG00000009389	RAVER2	80	48.858	Panthera_tigris_altaica
ENSIPUG00000007082	raver2	81	50.859	ENSPTRG00000000824	RAVER2	88	50.687	Pan_troglodytes
ENSIPUG00000007082	raver2	80	50.519	ENSPANG00000003396	RAVER2	82	50.422	Papio_anubis
ENSIPUG00000007082	raver2	57	62.982	ENSPKIG00000013925	raver2	82	62.312	Paramormyrops_kingsleyae
ENSIPUG00000007082	raver2	100	54.471	ENSPKIG00000019357	raver2	100	54.471	Paramormyrops_kingsleyae
ENSIPUG00000007082	raver2	63	53.890	ENSPSIG00000010074	RAVER2	70	53.890	Pelodiscus_sinensis
ENSIPUG00000007082	raver2	53	68.889	ENSPMGG00000017781	raver2	84	68.889	Periophthalmus_magnuspinnatus
ENSIPUG00000007082	raver2	81	50.172	ENSPEMG00000001332	Raver2	84	50.000	Peromyscus_maniculatus_bairdii
ENSIPUG00000007082	raver2	85	50.847	ENSPCIG00000020336	RAVER2	90	49.296	Phascolarctos_cinereus
ENSIPUG00000007082	raver2	100	58.547	ENSPFOG00000009386	raver2	99	59.243	Poecilia_formosa
ENSIPUG00000007082	raver2	100	59.330	ENSPLAG00000005632	raver2	100	59.866	Poecilia_latipinna
ENSIPUG00000007082	raver2	100	59.106	ENSPMEG00000000509	raver2	100	59.643	Poecilia_mexicana
ENSIPUG00000007082	raver2	100	59.553	ENSPREG00000020514	raver2	100	60.089	Poecilia_reticulata
ENSIPUG00000007082	raver2	65	56.846	ENSPCAG00000000017	RAVER2	64	56.846	Procavia_capensis
ENSIPUG00000007082	raver2	90	47.881	ENSPCOG00000028379	RAVER2	90	47.881	Propithecus_coquereli
ENSIPUG00000007082	raver2	74	50.659	ENSPVAG00000007172	RAVER2	86	50.659	Pteropus_vampyrus
ENSIPUG00000007082	raver2	76	77.252	ENSPNAG00000000962	raver2	100	77.252	Pygocentrus_nattereri
ENSIPUG00000007082	raver2	80	49.740	ENSRNOG00000023812	Raver2	82	51.332	Rattus_norvegicus
ENSIPUG00000007082	raver2	59	59.705	ENSRBIG00000044090	RAVER2	65	59.709	Rhinopithecus_bieti
ENSIPUG00000007082	raver2	78	50.267	ENSRROG00000041867	RAVER2	79	50.446	Rhinopithecus_roxellana
ENSIPUG00000007082	raver2	78	50.089	ENSSBOG00000023706	RAVER2	88	50.177	Saimiri_boliviensis_boliviensis
ENSIPUG00000007082	raver2	80	49.649	ENSSHAG00000014568	RAVER2	92	49.649	Sarcophilus_harrisii
ENSIPUG00000007082	raver2	84	55.650	ENSSFOG00015013015	raver2	93	55.571	Scleropages_formosus
ENSIPUG00000007082	raver2	58	74.684	ENSSFOG00015001335	raver2	86	74.747	Scleropages_formosus
ENSIPUG00000007082	raver2	100	60.067	ENSSMAG00000020654	raver2	100	60.623	Scophthalmus_maximus
ENSIPUG00000007082	raver2	100	60.447	ENSSDUG00000013065	raver2	100	60.894	Seriola_dumerili
ENSIPUG00000007082	raver2	97	61.220	ENSSLDG00000002746	raver2	99	61.680	Seriola_lalandi_dorsalis
ENSIPUG00000007082	raver2	86	49.106	ENSSPUG00000016441	RAVER2	93	48.195	Sphenodon_punctatus
ENSIPUG00000007082	raver2	62	74.463	ENSSPAG00000004134	raver2	96	74.463	Stegastes_partitus
ENSIPUG00000007082	raver2	80	52.189	ENSSSCG00000025672	-	88	52.007	Sus_scrofa
ENSIPUG00000007082	raver2	80	47.434	ENSTGUG00000009973	RAVER2	99	47.434	Taeniopygia_guttata
ENSIPUG00000007082	raver2	79	69.697	ENSTRUG00000018541	raver2	100	67.556	Takifugu_rubripes
ENSIPUG00000007082	raver2	83	58.503	ENSTNIG00000018106	raver2	99	58.503	Tetraodon_nigroviridis
ENSIPUG00000007082	raver2	75	46.580	ENSTBEG00000009004	RAVER2	87	46.765	Tupaia_belangeri
ENSIPUG00000007082	raver2	80	48.682	ENSUAMG00000007847	RAVER2	82	48.432	Ursus_americanus
ENSIPUG00000007082	raver2	80	48.432	ENSUMAG00000008489	RAVER2	85	48.432	Ursus_maritimus
ENSIPUG00000007082	raver2	88	48.392	ENSVVUG00000013993	RAVER2	97	48.392	Vulpes_vulpes
ENSIPUG00000007082	raver2	69	50.313	ENSXETG00000020406	raver2	90	45.840	Xenopus_tropicalis
ENSIPUG00000007082	raver2	100	58.969	ENSXMAG00000002206	raver2	100	59.620	Xiphophorus_maculatus