EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007113 (Gene tree)
Gene ID: 108265374
Gene Symbol: si:dkey-32e23.4
Alias: -
Full Name: dynamin-1-like protein
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 17197 bases
Position: chr5:4121608-4138804
Accession: 108265374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000010495	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSIPUP00000010524	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010946	-	2333	XM_017467625	ENSIPUP00000010495	658 (aa)	XP_017323114	A0A2D0QXI0
ENSIPUT00000010975	-	2186	XM_017467631	ENSIPUP00000010524	658 (aa)	XP_017323120	A0A2D0QXI0
ENSIPUT00000011016	-	2331	-	ENSIPUP00000010565	671 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000007113's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04217	Necroptosis	KEGG
ipu04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007113	si:dkey-32e23.4	66	30.973	ENSIPUG00000017075	-	69	30.973
ENSIPUG00000007113	si:dkey-32e23.4	62	31.455	ENSIPUG00000017098	-	65	31.925
ENSIPUG00000007113	si:dkey-32e23.4	66	31.798	ENSIPUG00000002022	-	75	31.798
ENSIPUG00000007113	si:dkey-32e23.4	66	31.868	ENSIPUG00000003930	-	67	32.783
ENSIPUG00000007113	si:dkey-32e23.4	97	71.365	ENSIPUG00000006021	dnm1l	97	71.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007113	si:dkey-32e23.4	100	87.746	ENSCVAG00000010346	si:dkey-32e23.4	100	87.746	Cyprinodon_variegatus
ENSIPUG00000007113	si:dkey-32e23.4	100	86.515	ENSELUG00000017713	si:dkey-32e23.4	100	86.515	Esox_lucius
ENSIPUG00000007113	si:dkey-32e23.4	100	86.989	ENSFHEG00000019298	si:dkey-32e23.4	100	86.989	Fundulus_heteroclitus
ENSIPUG00000007113	si:dkey-32e23.4	100	78.176	ENSGMOG00000005670	si:dkey-32e23.4	100	78.176	Gadus_morhua
ENSIPUG00000007113	si:dkey-32e23.4	100	87.292	ENSHCOG00000018024	si:dkey-32e23.4	100	87.292	Hippocampus_comes
ENSIPUG00000007113	si:dkey-32e23.4	100	87.746	ENSLBEG00000004848	si:dkey-32e23.4	100	87.746	Labrus_bergylta
ENSIPUG00000007113	si:dkey-32e23.4	100	88.654	ENSMALG00000006625	si:dkey-32e23.4	100	88.654	Monopterus_albus
ENSIPUG00000007113	si:dkey-32e23.4	100	86.233	ENSORLG00000011119	si:dkey-32e23.4	97	86.233	Oryzias_latipes
ENSIPUG00000007113	si:dkey-32e23.4	100	84.894	ENSORLG00020006829	si:dkey-32e23.4	100	84.894	Oryzias_latipes_hni
ENSIPUG00000007113	si:dkey-32e23.4	100	86.082	ENSORLG00015021365	si:dkey-32e23.4	100	86.082	Oryzias_latipes_hsok
ENSIPUG00000007113	si:dkey-32e23.4	100	84.718	ENSOMEG00000009143	si:dkey-32e23.4	100	84.718	Oryzias_melastigma
ENSIPUG00000007113	si:dkey-32e23.4	100	87.595	ENSPLAG00000023009	si:dkey-32e23.4	100	87.595	Poecilia_latipinna
ENSIPUG00000007113	si:dkey-32e23.4	100	87.595	ENSPMEG00000009231	si:dkey-32e23.4	100	87.595	Poecilia_mexicana
ENSIPUG00000007113	si:dkey-32e23.4	100	88.754	ENSPNAG00000020681	si:dkey-32e23.4	100	88.754	Pygocentrus_nattereri
ENSIPUG00000007113	si:dkey-32e23.4	100	88.048	ENSSMAG00000007121	si:dkey-32e23.4	96	88.048	Scophthalmus_maximus
ENSIPUG00000007113	si:dkey-32e23.4	100	86.989	ENSSDUG00000019756	si:dkey-32e23.4	100	86.989	Seriola_dumerili
ENSIPUG00000007113	si:dkey-32e23.4	100	86.233	ENSSPAG00000011027	si:dkey-32e23.4	100	86.233	Stegastes_partitus