EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007177 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3195 bases
Position: chr20:18509308-18512502
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000010501	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000010952	-	378	-	ENSIPUP00000010501	125 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000007177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007177	-	69	47.727	ENSIPUG00000000074	-	50	46.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007177	-	78	47.000	ENSAPEG00000003513	-	62	50.000	Amphiprion_percula
ENSIPUG00000007177	-	75	52.577	ENSAPEG00000021653	si:dkey-73p2.1	61	55.814	Amphiprion_percula
ENSIPUG00000007177	-	68	45.349	ENSATEG00000011891	-	53	45.349	Anabas_testudineus
ENSIPUG00000007177	-	71	49.451	ENSATEG00000011771	-	55	49.451	Anabas_testudineus
ENSIPUG00000007177	-	74	48.958	ENSAMXG00000042475	-	59	47.917	Astyanax_mexicanus
ENSIPUG00000007177	-	67	68.605	ENSAMXG00000031676	-	50	68.605	Astyanax_mexicanus
ENSIPUG00000007177	-	68	48.276	ENSAMXG00000034405	-	61	48.276	Astyanax_mexicanus
ENSIPUG00000007177	-	69	39.080	ENSAMXG00000033374	-	59	39.080	Astyanax_mexicanus
ENSIPUG00000007177	-	68	43.678	ENSCSEG00000001225	si:ch211-113e8.6	59	44.186	Cynoglossus_semilaevis
ENSIPUG00000007177	-	72	46.739	ENSDARG00000074610	si:ch211-113e8.6	63	46.739	Danio_rerio
ENSIPUG00000007177	-	66	51.765	ENSHBUG00000000685	-	60	51.765	Haplochromis_burtoni
ENSIPUG00000007177	-	67	47.674	ENSLBEG00000017980	-	55	46.591	Labrus_bergylta
ENSIPUG00000007177	-	66	53.488	ENSMAMG00000012570	-	52	51.765	Mastacembelus_armatus
ENSIPUG00000007177	-	54	45.588	ENSMZEG00005000312	-	62	45.588	Maylandia_zebra
ENSIPUG00000007177	-	73	51.613	ENSNBRG00000023276	-	57	51.724	Neolamprologus_brichardi
ENSIPUG00000007177	-	66	46.429	ENSNBRG00000009535	si:ch211-113e8.6	79	46.429	Neolamprologus_brichardi
ENSIPUG00000007177	-	70	44.944	ENSORLG00015018187	-	52	44.944	Oryzias_latipes_hsok
ENSIPUG00000007177	-	68	47.191	ENSORLG00015018237	-	58	47.191	Oryzias_latipes_hsok
ENSIPUG00000007177	-	66	47.619	ENSPMGG00000013552	-	78	47.619	Periophthalmus_magnuspinnatus
ENSIPUG00000007177	-	72	51.613	ENSPMGG00000008073	-	52	52.174	Periophthalmus_magnuspinnatus
ENSIPUG00000007177	-	70	46.154	ENSPMGG00000008403	-	61	47.191	Periophthalmus_magnuspinnatus
ENSIPUG00000007177	-	74	48.387	ENSPMGG00000009271	-	70	48.387	Periophthalmus_magnuspinnatus
ENSIPUG00000007177	-	67	48.837	ENSPMEG00000021963	-	68	48.837	Poecilia_mexicana
ENSIPUG00000007177	-	72	45.652	ENSSPAG00000013831	-	61	45.161	Stegastes_partitus