EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000007413 (Gene tree)
Gene ID: 108280267
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 22841 bases
Position: chr2:516724-539564
Accession: 108280267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000010857	RRM_1	PF00076.22	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000011315	-	10669	XM_017495120	ENSIPUP00000010857	2194 (aa)	XP_017350609	A0A2D0T6U8

Gene Model

Click here to download ENSIPUG00000007413's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007413	setd1a	75	86.486	ENSACIG00000007144	setd1a	89	88.000	Amphilophus_citrinellus
ENSIPUG00000007413	setd1a	65	81.107	ENSACAG00000007606	-	65	81.107	Anolis_carolinensis
ENSIPUG00000007413	setd1a	100	71.329	ENSAMXG00000009497	setd1a	100	71.192	Astyanax_mexicanus
ENSIPUG00000007413	setd1a	53	82.886	ENSCPBG00000010830	-	75	82.886	Chrysemys_picta_bellii
ENSIPUG00000007413	setd1a	100	58.721	ENSCVAG00000011672	setd1a	100	58.243	Cyprinodon_variegatus
ENSIPUG00000007413	setd1a	100	68.243	ENSDARG00000060030	setd1a	100	66.912	Danio_rerio
ENSIPUG00000007413	setd1a	100	56.567	ENSELUG00000020261	setd1a	80	59.548	Esox_lucius
ENSIPUG00000007413	setd1a	73	87.805	ENSFHEG00000023258	setd1a	96	79.032	Fundulus_heteroclitus
ENSIPUG00000007413	setd1a	61	85.246	ENSGAFG00000011698	setd1a	85	85.246	Gambusia_affinis
ENSIPUG00000007413	setd1a	72	75.000	ENSGACG00000013688	setd1a	84	75.641	Gasterosteus_aculeatus
ENSIPUG00000007413	setd1a	52	80.068	ENSHGLG00000014238	-	62	77.814	Heterocephalus_glaber_female
ENSIPUG00000007413	setd1a	73	77.473	ENSHCOG00000003119	setd1a	91	82.335	Hippocampus_comes
ENSIPUG00000007413	setd1a	69	78.947	ENSMAMG00000021851	setd1a	91	80.859	Mastacembelus_armatus
ENSIPUG00000007413	setd1a	66	81.356	ENSMMOG00000016992	setd1a	93	84.431	Mola_mola
ENSIPUG00000007413	setd1a	50	81.081	MGP_CAROLIEiJ_G0030519	-	100	70.051	Mus_caroli
ENSIPUG00000007413	setd1a	50	81.081	ENSMUSG00000042308	Setd1a	100	70.051	Mus_musculus
ENSIPUG00000007413	setd1a	50	81.081	MGP_SPRETEiJ_G0031633	Setd1a	100	69.543	Mus_spretus
ENSIPUG00000007413	setd1a	51	66.993	ENSOGAG00000028006	-	54	66.993	Otolemur_garnettii
ENSIPUG00000007413	setd1a	100	71.453	ENSPNAG00000019165	setd1a	100	71.175	Pygocentrus_nattereri
ENSIPUG00000007413	setd1a	58	60.613	ENSTRUG00000008953	setd1a	70	63.825	Takifugu_rubripes
ENSIPUG00000007413	setd1a	68	88.176	ENSTNIG00000014930	setd1a	78	76.271	Tetraodon_nigroviridis
ENSIPUG00000007413	setd1a	58	65.929	ENSXCOG00000017585	setd1a	98	58.687	Xiphophorus_couchianus