EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000007579 (Gene tree)
Gene ID: 108264543
Gene Symbol: nob1
Alias: fc27e05|si:ch73-167i17.3|wu:fc27e05
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4605 bases
Position: chr4:3135175-3139779
Accession: 108264543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011099	NOB1_Zn_bind	PF08772.11	6.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000011572	-	1493	XM_017466160	ENSIPUP00000011099	477 (aa)	XP_017321649	A0A2D0QTL5

Gene Model

Click here to download ENSIPUG00000007579's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007579's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007579	nob1	99	53.474	ENSG00000141101	NOB1	94	70.968	Homo_sapiens
ENSIPUG00000007579	nob1	100	50.314	ENSAPOG00000008241	nob1	100	48.041	Acanthochromis_polyacanthus
ENSIPUG00000007579	nob1	99	56.303	ENSAMEG00000006706	NOB1	99	55.274	Ailuropoda_melanoleuca
ENSIPUG00000007579	nob1	97	67.658	ENSACIG00000001503	nob1	100	58.316	Amphilophus_citrinellus
ENSIPUG00000007579	nob1	100	60.649	ENSAOCG00000006533	nob1	100	62.319	Amphiprion_ocellaris
ENSIPUG00000007579	nob1	100	57.442	ENSAPEG00000000029	nob1	99	61.075	Amphiprion_percula
ENSIPUG00000007579	nob1	100	60.446	ENSAPEG00000000032	-	100	59.592	Amphiprion_percula
ENSIPUG00000007579	nob1	98	65.493	ENSATEG00000014585	nob1	100	64.463	Anabas_testudineus
ENSIPUG00000007579	nob1	99	54.025	ENSACAG00000003697	NOB1	87	54.025	Anolis_carolinensis
ENSIPUG00000007579	nob1	99	54.526	ENSANAG00000036611	NOB1	99	54.449	Aotus_nancymaae
ENSIPUG00000007579	nob1	100	64.050	ENSACLG00000024897	nob1	100	64.050	Astatotilapia_calliptera
ENSIPUG00000007579	nob1	95	65.106	ENSAMXG00000003642	nob1	100	67.249	Astyanax_mexicanus
ENSIPUG00000007579	nob1	99	53.782	ENSBTAG00000020633	NOB1	99	54.008	Bos_taurus
ENSIPUG00000007579	nob1	61	41.500	WBGene00021843	Y54E10BR.4	76	41.206	Caenorhabditis_elegans
ENSIPUG00000007579	nob1	99	55.180	ENSCJAG00000015230	NOB1	99	54.219	Callithrix_jacchus
ENSIPUG00000007579	nob1	99	54.678	ENSCAFG00000020251	NOB1	99	54.927	Canis_familiaris
ENSIPUG00000007579	nob1	99	54.678	ENSCAFG00020020297	NOB1	99	54.927	Canis_lupus_dingo
ENSIPUG00000007579	nob1	99	53.814	ENSCHIG00000027022	NOB1	99	53.376	Capra_hircus
ENSIPUG00000007579	nob1	99	52.542	ENSTSYG00000003084	NOB1	99	54.661	Carlito_syrichta
ENSIPUG00000007579	nob1	86	50.122	ENSCAPG00000015542	NOB1	100	50.122	Cavia_aperea
ENSIPUG00000007579	nob1	99	52.743	ENSCPOG00000022538	NOB1	99	52.743	Cavia_porcellus
ENSIPUG00000007579	nob1	99	54.430	ENSCCAG00000023773	NOB1	99	54.219	Cebus_capucinus
ENSIPUG00000007579	nob1	99	54.717	ENSCATG00000039487	NOB1	99	54.832	Cercocebus_atys
ENSIPUG00000007579	nob1	86	47.689	ENSCLAG00000005926	NOB1	100	48.662	Chinchilla_lanigera
ENSIPUG00000007579	nob1	99	54.947	ENSCSAG00000004158	NOB1	99	54.852	Chlorocebus_sabaeus
ENSIPUG00000007579	nob1	99	49.370	ENSCHOG00000011047	NOB1	99	46.653	Choloepus_hoffmanni
ENSIPUG00000007579	nob1	99	55.000	ENSCPBG00000027035	NOB1	92	54.812	Chrysemys_picta_bellii
ENSIPUG00000007579	nob1	72	51.429	ENSCING00000023441	-	86	50.962	Ciona_intestinalis
ENSIPUG00000007579	nob1	72	49.761	ENSCSAVG00000009081	-	100	39.167	Ciona_savignyi
ENSIPUG00000007579	nob1	99	54.927	ENSCGRG00001009255	Nob1	95	53.669	Cricetulus_griseus_chok1gshd
ENSIPUG00000007579	nob1	99	54.873	ENSCGRG00000010869	Nob1	99	53.602	Cricetulus_griseus_crigri
ENSIPUG00000007579	nob1	90	58.879	ENSCSEG00000019657	nob1	93	57.009	Cynoglossus_semilaevis
ENSIPUG00000007579	nob1	99	61.429	ENSDARG00000016080	nob1	100	63.445	Danio_rerio
ENSIPUG00000007579	nob1	99	53.814	ENSDNOG00000041643	NOB1	99	53.814	Dasypus_novemcinctus
ENSIPUG00000007579	nob1	99	54.237	ENSDORG00000000483	Nob1	99	54.237	Dipodomys_ordii
ENSIPUG00000007579	nob1	97	36.140	FBgn0030177	CG2972	98	36.897	Drosophila_melanogaster
ENSIPUG00000007579	nob1	99	42.647	ENSEBUG00000004464	nob1	99	42.857	Eptatretus_burgeri
ENSIPUG00000007579	nob1	99	53.992	ENSEASG00005021356	NOB1	83	55.063	Equus_asinus_asinus
ENSIPUG00000007579	nob1	99	53.992	ENSECAG00000023748	NOB1	80	54.641	Equus_caballus
ENSIPUG00000007579	nob1	72	41.618	ENSEEUG00000014384	NOB1	68	39.718	Erinaceus_europaeus
ENSIPUG00000007579	nob1	100	58.517	ENSELUG00000016199	nob1	100	57.819	Esox_lucius
ENSIPUG00000007579	nob1	99	55.765	ENSFCAG00000002958	NOB1	99	54.852	Felis_catus
ENSIPUG00000007579	nob1	99	51.363	ENSFDAG00000009239	NOB1	99	51.797	Fukomys_damarensis
ENSIPUG00000007579	nob1	55	60.741	ENSFHEG00000007657	nob1	52	69.756	Fundulus_heteroclitus
ENSIPUG00000007579	nob1	95	63.243	ENSGMOG00000010638	nob1	99	56.118	Gadus_morhua
ENSIPUG00000007579	nob1	99	47.925	ENSGALG00000000693	NOB1	99	48.734	Gallus_gallus
ENSIPUG00000007579	nob1	100	57.950	ENSGAFG00000006104	nob1	100	57.884	Gambusia_affinis
ENSIPUG00000007579	nob1	99	58.403	ENSGACG00000017552	nob1	100	59.408	Gasterosteus_aculeatus
ENSIPUG00000007579	nob1	99	55.907	ENSGAGG00000003902	NOB1	99	61.852	Gopherus_agassizii
ENSIPUG00000007579	nob1	99	53.895	ENSGGOG00000025456	NOB1	99	53.814	Gorilla_gorilla
ENSIPUG00000007579	nob1	100	58.787	ENSHBUG00000002580	nob1	100	58.071	Haplochromis_burtoni
ENSIPUG00000007579	nob1	99	54.008	ENSHGLG00000014260	NOB1	99	53.814	Heterocephalus_glaber_female
ENSIPUG00000007579	nob1	99	54.008	ENSHGLG00100013978	NOB1	99	53.814	Heterocephalus_glaber_male
ENSIPUG00000007579	nob1	99	54.412	ENSHCOG00000006699	nob1	100	53.099	Hippocampus_comes
ENSIPUG00000007579	nob1	99	54.025	ENSSTOG00000001204	NOB1	99	53.602	Ictidomys_tridecemlineatus
ENSIPUG00000007579	nob1	99	52.431	ENSJJAG00000015543	Nob1	99	51.586	Jaculus_jaculus
ENSIPUG00000007579	nob1	100	63.580	ENSKMAG00000018220	nob1	100	63.580	Kryptolebias_marmoratus
ENSIPUG00000007579	nob1	100	60.243	ENSLBEG00000026375	nob1	100	59.635	Labrus_bergylta
ENSIPUG00000007579	nob1	100	59.875	ENSLACG00000006973	NOB1	100	60.083	Latimeria_chalumnae
ENSIPUG00000007579	nob1	99	54.449	ENSLAFG00000008978	NOB1	99	54.641	Loxodonta_africana
ENSIPUG00000007579	nob1	99	55.158	ENSMFAG00000030131	NOB1	99	54.641	Macaca_fascicularis
ENSIPUG00000007579	nob1	99	55.158	ENSMMUG00000006506	NOB1	99	55.063	Macaca_mulatta
ENSIPUG00000007579	nob1	99	55.368	ENSMNEG00000028829	NOB1	99	50.422	Macaca_nemestrina
ENSIPUG00000007579	nob1	99	54.947	ENSMLEG00000032913	NOB1	99	55.063	Mandrillus_leucophaeus
ENSIPUG00000007579	nob1	57	64.748	ENSMZEG00005003827	-	85	64.748	Maylandia_zebra
ENSIPUG00000007579	nob1	100	63.580	ENSMZEG00005028346	nob1	100	63.580	Maylandia_zebra
ENSIPUG00000007579	nob1	56	59.701	ENSMGAG00000008675	NOB1	98	59.925	Meleagris_gallopavo
ENSIPUG00000007579	nob1	99	52.754	ENSMAUG00000013554	Nob1	99	51.059	Mesocricetus_auratus
ENSIPUG00000007579	nob1	99	53.814	ENSMICG00000012123	NOB1	99	54.641	Microcebus_murinus
ENSIPUG00000007579	nob1	99	55.508	ENSMOCG00000010370	Nob1	99	54.449	Microtus_ochrogaster
ENSIPUG00000007579	nob1	100	59.119	ENSMMOG00000002120	nob1	100	59.539	Mola_mola
ENSIPUG00000007579	nob1	99	53.469	ENSMODG00000002677	NOB1	99	54.792	Monodelphis_domestica
ENSIPUG00000007579	nob1	99	61.317	ENSMALG00000014580	nob1	100	62.319	Monopterus_albus
ENSIPUG00000007579	nob1	100	53.862	MGP_CAROLIEiJ_G0031536	Nob1	99	53.445	Mus_caroli
ENSIPUG00000007579	nob1	99	54.661	ENSMUSG00000003848	Nob1	99	52.854	Mus_musculus
ENSIPUG00000007579	nob1	99	54.025	MGP_PahariEiJ_G0023136	Nob1	99	55.297	Mus_pahari
ENSIPUG00000007579	nob1	100	53.653	MGP_SPRETEiJ_G0032654	Nob1	99	54.280	Mus_spretus
ENSIPUG00000007579	nob1	99	53.571	ENSMPUG00000007483	NOB1	91	55.368	Mustela_putorius_furo
ENSIPUG00000007579	nob1	99	54.430	ENSMLUG00000006667	NOB1	99	54.219	Myotis_lucifugus
ENSIPUG00000007579	nob1	99	53.178	ENSNGAG00000008627	Nob1	99	53.602	Nannospalax_galili
ENSIPUG00000007579	nob1	99	54.105	ENSNLEG00000005572	NOB1	99	54.430	Nomascus_leucogenys
ENSIPUG00000007579	nob1	80	52.727	ENSOPRG00000006721	NOB1	99	53.264	Ochotona_princeps
ENSIPUG00000007579	nob1	99	54.123	ENSODEG00000014376	NOB1	99	53.602	Octodon_degus
ENSIPUG00000007579	nob1	99	59.875	ENSONIG00000003319	nob1	100	61.522	Oreochromis_niloticus
ENSIPUG00000007579	nob1	86	53.398	ENSOCUG00000004400	NOB1	100	53.641	Oryctolagus_cuniculus
ENSIPUG00000007579	nob1	100	63.048	ENSORLG00000018862	nob1	100	62.578	Oryzias_latipes
ENSIPUG00000007579	nob1	100	63.257	ENSORLG00020014687	nob1	100	64.260	Oryzias_latipes_hni
ENSIPUG00000007579	nob1	100	63.257	ENSORLG00015012156	nob1	100	63.257	Oryzias_latipes_hsok
ENSIPUG00000007579	nob1	100	62.055	ENSOMEG00000022722	nob1	100	62.893	Oryzias_melastigma
ENSIPUG00000007579	nob1	99	49.580	ENSOGAG00000004590	NOB1	99	49.580	Otolemur_garnettii
ENSIPUG00000007579	nob1	99	54.202	ENSOARG00000003606	NOB1	99	53.165	Ovis_aries
ENSIPUG00000007579	nob1	99	53.474	ENSPPAG00000040257	NOB1	99	53.125	Pan_paniscus
ENSIPUG00000007579	nob1	97	48.718	ENSPPAG00000003317	-	100	47.966	Pan_paniscus
ENSIPUG00000007579	nob1	99	54.219	ENSPPRG00000016949	NOB1	99	55.297	Panthera_pardus
ENSIPUG00000007579	nob1	99	54.430	ENSPTIG00000011234	NOB1	99	55.274	Panthera_tigris_altaica
ENSIPUG00000007579	nob1	99	53.474	ENSPTRG00000008285	NOB1	99	54.237	Pan_troglodytes
ENSIPUG00000007579	nob1	99	54.641	ENSPANG00000015858	NOB1	99	54.852	Papio_anubis
ENSIPUG00000007579	nob1	100	60.526	ENSPKIG00000020293	nob1	100	62.578	Paramormyrops_kingsleyae
ENSIPUG00000007579	nob1	99	52.818	ENSPSIG00000012477	NOB1	100	52.818	Pelodiscus_sinensis
ENSIPUG00000007579	nob1	93	62.731	ENSPMGG00000023476	nob1	100	64.576	Periophthalmus_magnuspinnatus
ENSIPUG00000007579	nob1	99	54.393	ENSPEMG00000010995	Nob1	100	54.184	Peromyscus_maniculatus_bairdii
ENSIPUG00000007579	nob1	86	53.771	ENSPFOG00000000027	nob1	100	54.745	Poecilia_formosa
ENSIPUG00000007579	nob1	60	57.439	ENSPLAG00000011546	nob1	98	58.478	Poecilia_latipinna
ENSIPUG00000007579	nob1	100	57.741	ENSPMEG00000023435	nob1	100	58.368	Poecilia_mexicana
ENSIPUG00000007579	nob1	99	58.455	ENSPREG00000007675	nob1	100	59.290	Poecilia_reticulata
ENSIPUG00000007579	nob1	99	54.316	ENSPPYG00000007509	NOB1	99	54.641	Pongo_abelii
ENSIPUG00000007579	nob1	99	53.376	ENSPCAG00000001527	NOB1	99	54.008	Procavia_capensis
ENSIPUG00000007579	nob1	99	54.237	ENSPCOG00000025515	NOB1	99	53.602	Propithecus_coquereli
ENSIPUG00000007579	nob1	81	37.047	ENSPVAG00000013330	NOB1	78	36.693	Pteropus_vampyrus
ENSIPUG00000007579	nob1	97	66.667	ENSPNYG00000018449	nob1	100	63.655	Pundamilia_nyererei
ENSIPUG00000007579	nob1	99	54.237	ENSRNOG00000021890	Nob1	99	54.025	Rattus_norvegicus
ENSIPUG00000007579	nob1	99	53.814	ENSRBIG00000019599	NOB1	99	53.376	Rhinopithecus_bieti
ENSIPUG00000007579	nob1	99	53.814	ENSRROG00000033419	NOB1	99	53.376	Rhinopithecus_roxellana
ENSIPUG00000007579	nob1	86	51.816	ENSSBOG00000029042	NOB1	89	51.699	Saimiri_boliviensis_boliviensis
ENSIPUG00000007579	nob1	99	56.421	ENSSHAG00000015387	NOB1	99	56.421	Sarcophilus_harrisii
ENSIPUG00000007579	nob1	100	61.270	ENSSFOG00015008503	nob1	100	61.426	Scleropages_formosus
ENSIPUG00000007579	nob1	100	63.147	ENSSMAG00000003064	nob1	100	63.103	Scophthalmus_maximus
ENSIPUG00000007579	nob1	100	61.746	ENSSDUG00000007307	nob1	100	62.786	Seriola_dumerili
ENSIPUG00000007579	nob1	66	73.874	ENSSLDG00000011459	-	96	75.419	Seriola_lalandi_dorsalis
ENSIPUG00000007579	nob1	97	48.608	ENSSPUG00000005621	NOB1	99	52.439	Sphenodon_punctatus
ENSIPUG00000007579	nob1	100	62.346	ENSSPAG00000022362	nob1	100	62.940	Stegastes_partitus
ENSIPUG00000007579	nob1	99	54.025	ENSSSCG00000002753	NOB1	99	55.508	Sus_scrofa
ENSIPUG00000007579	nob1	99	61.570	ENSTRUG00000004780	nob1	100	62.090	Takifugu_rubripes
ENSIPUG00000007579	nob1	99	61.570	ENSTRUG00000023145	nob1	100	62.090	Takifugu_rubripes
ENSIPUG00000007579	nob1	99	59.034	ENSTNIG00000002552	nob1	100	58.491	Tetraodon_nigroviridis
ENSIPUG00000007579	nob1	65	45.955	ENSTBEG00000000690	NOB1	51	46.405	Tupaia_belangeri
ENSIPUG00000007579	nob1	55	56.654	ENSUAMG00000028135	NOB1	99	59.316	Ursus_americanus
ENSIPUG00000007579	nob1	99	53.992	ENSUMAG00000018658	NOB1	95	55.252	Ursus_maritimus
ENSIPUG00000007579	nob1	99	54.886	ENSVVUG00000017271	NOB1	99	55.136	Vulpes_vulpes
ENSIPUG00000007579	nob1	100	55.417	ENSXETG00000017874	nob1	99	55.000	Xenopus_tropicalis
ENSIPUG00000007579	nob1	79	60.370	ENSXCOG00000009734	nob1	100	59.259	Xiphophorus_couchianus
ENSIPUG00000007579	nob1	100	53.027	ENSXMAG00000017371	nob1	100	52.610	Xiphophorus_maculatus