EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000007635 (Gene tree)
Gene ID: 108257979
Gene Symbol: farsa
Alias: farsla|wu:fj21a11|zgc:136506|zgc:158185
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 20850 bases
Position: chr2:13712278-13733127
Accession: 108257979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011263	tRNA-synt_2d	PF01409.20	5.9e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000011743	-	2216	XM_017456179	ENSIPUP00000011263	497 (aa)	XP_017311668	W5UCW8

Gene Model

Click here to download ENSIPUG00000007635's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007635's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007635	farsa	100	77.867	ENSG00000179115	FARSA	99	79.641	Homo_sapiens
ENSIPUG00000007635	farsa	100	89.135	ENSAPOG00000011465	farsa	100	89.135	Acanthochromis_polyacanthus
ENSIPUG00000007635	farsa	100	77.465	ENSAMEG00000012446	FARSA	98	77.465	Ailuropoda_melanoleuca
ENSIPUG00000007635	farsa	100	84.909	ENSACIG00000020499	farsa	100	84.909	Amphilophus_citrinellus
ENSIPUG00000007635	farsa	100	88.934	ENSAOCG00000000581	farsa	100	88.934	Amphiprion_ocellaris
ENSIPUG00000007635	farsa	100	88.732	ENSAPEG00000017695	farsa	100	88.732	Amphiprion_percula
ENSIPUG00000007635	farsa	100	79.477	ENSATEG00000012807	farsa	100	79.477	Anabas_testudineus
ENSIPUG00000007635	farsa	100	74.498	ENSATEG00000012633	farsa	100	74.498	Anabas_testudineus
ENSIPUG00000007635	farsa	99	77.530	ENSACAG00000017166	FARSA	83	77.530	Anolis_carolinensis
ENSIPUG00000007635	farsa	100	77.264	ENSANAG00000037420	FARSA	98	77.264	Aotus_nancymaae
ENSIPUG00000007635	farsa	100	91.147	ENSACLG00000001716	farsa	100	91.147	Astatotilapia_calliptera
ENSIPUG00000007635	farsa	100	92.958	ENSAMXG00000037912	farsa	100	92.958	Astyanax_mexicanus
ENSIPUG00000007635	farsa	100	76.861	ENSBTAG00000021374	FARSA	98	76.861	Bos_taurus
ENSIPUG00000007635	farsa	96	62.815	WBGene00001497	fars-1	95	62.815	Caenorhabditis_elegans
ENSIPUG00000007635	farsa	99	76.815	ENSCJAG00000004686	FARSA	98	72.636	Callithrix_jacchus
ENSIPUG00000007635	farsa	100	78.068	ENSCAFG00000017096	FARSA	98	78.068	Canis_familiaris
ENSIPUG00000007635	farsa	100	78.068	ENSCAFG00020005315	FARSA	98	78.068	Canis_lupus_dingo
ENSIPUG00000007635	farsa	100	72.435	ENSCHIG00000022617	FARSA	98	72.435	Capra_hircus
ENSIPUG00000007635	farsa	92	74.672	ENSTSYG00000002595	FARSA	83	74.672	Carlito_syrichta
ENSIPUG00000007635	farsa	90	78.571	ENSCAPG00000011353	FARSA	95	78.571	Cavia_aperea
ENSIPUG00000007635	farsa	100	77.062	ENSCPOG00000000787	FARSA	98	77.062	Cavia_porcellus
ENSIPUG00000007635	farsa	100	77.062	ENSCCAG00000028176	FARSA	98	77.062	Cebus_capucinus
ENSIPUG00000007635	farsa	99	77.016	ENSCLAG00000015489	FARSA	98	77.016	Chinchilla_lanigera
ENSIPUG00000007635	farsa	94	79.399	ENSCSAG00000006530	FARSA	98	79.399	Chlorocebus_sabaeus
ENSIPUG00000007635	farsa	96	81.837	ENSCPBG00000023915	FARSA	99	80.000	Chrysemys_picta_bellii
ENSIPUG00000007635	farsa	99	66.197	ENSCING00000002567	-	99	66.197	Ciona_intestinalis
ENSIPUG00000007635	farsa	99	67.404	ENSCSAVG00000010683	-	98	67.404	Ciona_savignyi
ENSIPUG00000007635	farsa	100	77.465	ENSCANG00000043649	-	98	77.465	Colobus_angolensis_palliatus
ENSIPUG00000007635	farsa	100	78.270	ENSCGRG00001019769	Farsa	98	78.270	Cricetulus_griseus_chok1gshd
ENSIPUG00000007635	farsa	100	78.270	ENSCGRG00000013415	Farsa	98	78.270	Cricetulus_griseus_crigri
ENSIPUG00000007635	farsa	100	86.922	ENSCSEG00000016214	farsa	96	86.922	Cynoglossus_semilaevis
ENSIPUG00000007635	farsa	100	87.123	ENSCVAG00000007907	farsa	100	87.123	Cyprinodon_variegatus
ENSIPUG00000007635	farsa	100	91.952	ENSDARG00000098825	farsa	100	91.952	Danio_rerio
ENSIPUG00000007635	farsa	96	78.151	ENSDNOG00000032350	FARSA	98	78.151	Dasypus_novemcinctus
ENSIPUG00000007635	farsa	99	77.016	ENSDORG00000010118	Farsa	98	77.016	Dipodomys_ordii
ENSIPUG00000007635	farsa	99	67.004	FBgn0030007	alpha-PheRS	99	67.004	Drosophila_melanogaster
ENSIPUG00000007635	farsa	100	69.416	ENSETEG00000018673	FARSA	98	69.416	Echinops_telfairi
ENSIPUG00000007635	farsa	60	69.595	ENSEBUG00000008545	farsa	99	69.595	Eptatretus_burgeri
ENSIPUG00000007635	farsa	93	66.038	ENSEASG00005004093	FARSA	95	66.038	Equus_asinus_asinus
ENSIPUG00000007635	farsa	100	76.861	ENSECAG00000015139	FARSA	93	76.861	Equus_caballus
ENSIPUG00000007635	farsa	100	91.549	ENSELUG00000010183	farsa	100	91.549	Esox_lucius
ENSIPUG00000007635	farsa	100	77.465	ENSFCAG00000023511	FARSA	98	77.465	Felis_catus
ENSIPUG00000007635	farsa	99	76.613	ENSFDAG00000005987	FARSA	98	76.613	Fukomys_damarensis
ENSIPUG00000007635	farsa	100	89.135	ENSFHEG00000009382	farsa	94	89.135	Fundulus_heteroclitus
ENSIPUG00000007635	farsa	100	84.538	ENSGMOG00000018319	farsa	100	84.538	Gadus_morhua
ENSIPUG00000007635	farsa	99	72.358	ENSGALG00000040258	FARSA	86	72.358	Gallus_gallus
ENSIPUG00000007635	farsa	100	89.336	ENSGAFG00000014146	farsa	100	89.336	Gambusia_affinis
ENSIPUG00000007635	farsa	100	89.357	ENSGACG00000006278	farsa	100	89.357	Gasterosteus_aculeatus
ENSIPUG00000007635	farsa	100	80.400	ENSGAGG00000000753	FARSA	99	80.400	Gopherus_agassizii
ENSIPUG00000007635	farsa	100	77.666	ENSGGOG00000003418	FARSA	98	77.666	Gorilla_gorilla
ENSIPUG00000007635	farsa	100	91.147	ENSHBUG00000019852	farsa	100	91.147	Haplochromis_burtoni
ENSIPUG00000007635	farsa	99	76.210	ENSHGLG00000005213	FARSA	98	76.210	Heterocephalus_glaber_female
ENSIPUG00000007635	farsa	99	76.411	ENSHGLG00100009586	FARSA	98	76.411	Heterocephalus_glaber_male
ENSIPUG00000007635	farsa	100	87.726	ENSHCOG00000019548	farsa	100	87.726	Hippocampus_comes
ENSIPUG00000007635	farsa	100	76.258	ENSSTOG00000008748	FARSA	98	76.258	Ictidomys_tridecemlineatus
ENSIPUG00000007635	farsa	100	87.324	ENSKMAG00000010698	farsa	100	87.324	Kryptolebias_marmoratus
ENSIPUG00000007635	farsa	86	87.059	ENSLBEG00000001258	farsa	97	87.059	Labrus_bergylta
ENSIPUG00000007635	farsa	100	88.330	ENSLBEG00000006757	-	100	88.330	Labrus_bergylta
ENSIPUG00000007635	farsa	93	87.257	ENSLOCG00000008389	farsa	96	87.257	Lepisosteus_oculatus
ENSIPUG00000007635	farsa	100	76.861	ENSLAFG00000016154	FARSA	98	76.861	Loxodonta_africana
ENSIPUG00000007635	farsa	100	77.465	ENSMFAG00000030595	FARSA	98	77.465	Macaca_fascicularis
ENSIPUG00000007635	farsa	100	77.465	ENSMMUG00000004390	FARSA	98	77.465	Macaca_mulatta
ENSIPUG00000007635	farsa	100	77.465	ENSMNEG00000043866	FARSA	98	77.465	Macaca_nemestrina
ENSIPUG00000007635	farsa	100	77.309	ENSMLEG00000029157	FARSA	98	77.309	Mandrillus_leucophaeus
ENSIPUG00000007635	farsa	100	87.928	ENSMAMG00000010636	farsa	100	87.928	Mastacembelus_armatus
ENSIPUG00000007635	farsa	100	91.147	ENSMZEG00005002319	farsa	100	91.147	Maylandia_zebra
ENSIPUG00000007635	farsa	100	78.270	ENSMAUG00000009188	Farsa	98	78.270	Mesocricetus_auratus
ENSIPUG00000007635	farsa	100	77.264	ENSMICG00000016272	FARSA	98	77.264	Microcebus_murinus
ENSIPUG00000007635	farsa	99	78.024	ENSMOCG00000011399	Farsa	98	78.024	Microtus_ochrogaster
ENSIPUG00000007635	farsa	100	84.306	ENSMMOG00000006287	farsa	100	84.306	Mola_mola
ENSIPUG00000007635	farsa	99	77.419	ENSMODG00000011519	FARSA	100	77.419	Monodelphis_domestica
ENSIPUG00000007635	farsa	100	85.111	ENSMALG00000001972	farsa	100	84.909	Monopterus_albus
ENSIPUG00000007635	farsa	99	78.226	MGP_CAROLIEiJ_G0031312	Farsa	98	78.226	Mus_caroli
ENSIPUG00000007635	farsa	99	78.024	ENSMUSG00000003808	Farsa	98	78.024	Mus_musculus
ENSIPUG00000007635	farsa	99	78.024	MGP_PahariEiJ_G0022917	Farsa	98	78.024	Mus_pahari
ENSIPUG00000007635	farsa	99	78.226	MGP_SPRETEiJ_G0032431	Farsa	98	78.226	Mus_spretus
ENSIPUG00000007635	farsa	100	78.270	ENSMPUG00000004400	FARSA	98	78.270	Mustela_putorius_furo
ENSIPUG00000007635	farsa	100	77.465	ENSMLUG00000012767	FARSA	98	77.465	Myotis_lucifugus
ENSIPUG00000007635	farsa	74	79.133	ENSNGAG00000018353	Farsa	100	79.133	Nannospalax_galili
ENSIPUG00000007635	farsa	100	90.141	ENSNBRG00000010063	farsa	100	90.141	Neolamprologus_brichardi
ENSIPUG00000007635	farsa	100	77.465	ENSNLEG00000012899	FARSA	98	77.465	Nomascus_leucogenys
ENSIPUG00000007635	farsa	100	77.465	ENSMEUG00000014253	FARSA	100	77.465	Notamacropus_eugenii
ENSIPUG00000007635	farsa	100	76.660	ENSOPRG00000005004	FARSA	98	76.660	Ochotona_princeps
ENSIPUG00000007635	farsa	99	76.613	ENSODEG00000010433	FARSA	98	76.613	Octodon_degus
ENSIPUG00000007635	farsa	100	91.147	ENSONIG00000008075	farsa	100	91.147	Oreochromis_niloticus
ENSIPUG00000007635	farsa	100	88.934	ENSORLG00000016406	farsa	90	88.934	Oryzias_latipes
ENSIPUG00000007635	farsa	100	89.135	ENSORLG00020021978	farsa	100	89.135	Oryzias_latipes_hni
ENSIPUG00000007635	farsa	100	88.934	ENSORLG00015015045	farsa	100	88.934	Oryzias_latipes_hsok
ENSIPUG00000007635	farsa	100	88.531	ENSOMEG00000017367	farsa	97	86.720	Oryzias_melastigma
ENSIPUG00000007635	farsa	100	77.264	ENSOGAG00000012243	FARSA	98	77.264	Otolemur_garnettii
ENSIPUG00000007635	farsa	100	77.062	ENSOARG00000009991	FARSA	92	77.062	Ovis_aries
ENSIPUG00000007635	farsa	100	77.666	ENSPPAG00000034266	FARSA	98	77.666	Pan_paniscus
ENSIPUG00000007635	farsa	100	77.465	ENSPPRG00000000346	FARSA	98	77.465	Panthera_pardus
ENSIPUG00000007635	farsa	92	79.739	ENSPTIG00000011502	FARSA	94	79.739	Panthera_tigris_altaica
ENSIPUG00000007635	farsa	100	77.666	ENSPTRG00000010550	FARSA	98	77.666	Pan_troglodytes
ENSIPUG00000007635	farsa	100	77.465	ENSPANG00000010978	FARSA	98	73.038	Papio_anubis
ENSIPUG00000007635	farsa	100	89.537	ENSPKIG00000007170	farsa	100	89.537	Paramormyrops_kingsleyae
ENSIPUG00000007635	farsa	90	76.615	ENSPSIG00000012701	FARSA	98	76.615	Pelodiscus_sinensis
ENSIPUG00000007635	farsa	100	83.099	ENSPMGG00000001401	farsa	100	83.099	Periophthalmus_magnuspinnatus
ENSIPUG00000007635	farsa	100	77.666	ENSPEMG00000012560	Farsa	98	77.666	Peromyscus_maniculatus_bairdii
ENSIPUG00000007635	farsa	100	79.678	ENSPMAG00000008453	farsa	100	79.678	Petromyzon_marinus
ENSIPUG00000007635	farsa	100	77.867	ENSPCIG00000019294	FARSA	100	77.867	Phascolarctos_cinereus
ENSIPUG00000007635	farsa	100	89.537	ENSPFOG00000001201	farsa	100	89.537	Poecilia_formosa
ENSIPUG00000007635	farsa	100	89.537	ENSPLAG00000018191	farsa	100	89.537	Poecilia_latipinna
ENSIPUG00000007635	farsa	100	89.738	ENSPMEG00000013547	farsa	100	89.738	Poecilia_mexicana
ENSIPUG00000007635	farsa	100	84.105	ENSPREG00000013620	farsa	100	84.105	Poecilia_reticulata
ENSIPUG00000007635	farsa	100	77.465	ENSPPYG00000009615	FARSA	98	77.465	Pongo_abelii
ENSIPUG00000007635	farsa	100	76.660	ENSPCAG00000015721	FARSA	98	76.660	Procavia_capensis
ENSIPUG00000007635	farsa	100	77.264	ENSPCOG00000014412	FARSA	98	77.264	Propithecus_coquereli
ENSIPUG00000007635	farsa	86	85.648	ENSPVAG00000014714	FARSA	84	85.648	Pteropus_vampyrus
ENSIPUG00000007635	farsa	100	91.147	ENSPNYG00000002144	farsa	100	91.147	Pundamilia_nyererei
ENSIPUG00000007635	farsa	100	94.366	ENSPNAG00000000869	farsa	100	94.366	Pygocentrus_nattereri
ENSIPUG00000007635	farsa	99	78.024	ENSRNOG00000003149	Farsa	98	78.024	Rattus_norvegicus
ENSIPUG00000007635	farsa	100	77.264	ENSRBIG00000025585	FARSA	98	77.264	Rhinopithecus_bieti
ENSIPUG00000007635	farsa	100	77.264	ENSRROG00000040046	FARSA	98	72.837	Rhinopithecus_roxellana
ENSIPUG00000007635	farsa	93	51.059	YFL022C	FRS2	93	51.059	Saccharomyces_cerevisiae
ENSIPUG00000007635	farsa	100	77.264	ENSSBOG00000031362	FARSA	98	77.264	Saimiri_boliviensis_boliviensis
ENSIPUG00000007635	farsa	90	78.971	ENSSHAG00000015006	FARSA	100	78.971	Sarcophilus_harrisii
ENSIPUG00000007635	farsa	100	86.519	ENSSFOG00015014864	farsa	100	86.519	Scleropages_formosus
ENSIPUG00000007635	farsa	100	88.732	ENSSMAG00000002358	farsa	100	88.732	Scophthalmus_maximus
ENSIPUG00000007635	farsa	100	87.928	ENSSDUG00000008631	farsa	100	87.928	Seriola_dumerili
ENSIPUG00000007635	farsa	100	87.525	ENSSLDG00000017108	farsa	100	87.525	Seriola_lalandi_dorsalis
ENSIPUG00000007635	farsa	67	97.059	ENSSARG00000006579	-	68	97.059	Sorex_araneus
ENSIPUG00000007635	farsa	90	68.386	ENSSPUG00000012509	FARSA	99	67.028	Sphenodon_punctatus
ENSIPUG00000007635	farsa	100	89.537	ENSSPAG00000018292	farsa	92	89.537	Stegastes_partitus
ENSIPUG00000007635	farsa	100	76.861	ENSSSCG00000013745	FARSA	98	76.861	Sus_scrofa
ENSIPUG00000007635	farsa	100	75.252	ENSTRUG00000010624	farsa	100	75.252	Takifugu_rubripes
ENSIPUG00000007635	farsa	100	80.885	ENSTNIG00000008330	farsa	100	80.885	Tetraodon_nigroviridis
ENSIPUG00000007635	farsa	90	75.446	ENSTBEG00000000396	FARSA	98	74.330	Tupaia_belangeri
ENSIPUG00000007635	farsa	87	94.118	ENSTTRG00000003599	FARSA	85	94.118	Tursiops_truncatus
ENSIPUG00000007635	farsa	100	77.666	ENSUAMG00000010230	FARSA	98	77.666	Ursus_americanus
ENSIPUG00000007635	farsa	100	77.666	ENSUMAG00000006110	FARSA	98	77.666	Ursus_maritimus
ENSIPUG00000007635	farsa	100	78.068	ENSVVUG00000024145	FARSA	98	78.068	Vulpes_vulpes
ENSIPUG00000007635	farsa	100	78.916	ENSXETG00000007936	farsa	100	78.916	Xenopus_tropicalis
ENSIPUG00000007635	farsa	100	79.719	ENSXCOG00000015512	farsa	100	79.719	Xiphophorus_couchianus
ENSIPUG00000007635	farsa	100	88.129	ENSXMAG00000008832	farsa	100	88.129	Xiphophorus_maculatus