EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000007675 (Gene tree)
Gene ID: 108256263
Gene Symbol: Smpd3
Alias: Mitochondrial SMase|smpdm|zgc:153995
Full Name: sphingomyelin phosphodiesterase 3-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5953 bases
Position: chr23:18900800-18906752
Accession: 108256263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011269	Exo_endo_phos	PF03372.23	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000011750	-	1810	XM_017452915	ENSIPUP00000011269	564 (aa)	XP_017308404	W5UHC0

Gene Model

Click here to download ENSIPUG00000007675's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00600	Sphingolipid metabolism	KEGG
ipu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007675's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007675	Smpd3	100	59.380	ENSAPOG00000005846	smpd5	99	59.380	Acanthochromis_polyacanthus
ENSIPUG00000007675	Smpd3	81	44.340	ENSAMEG00000006154	-	94	45.455	Ailuropoda_melanoleuca
ENSIPUG00000007675	Smpd3	100	60.274	ENSACIG00000015732	smpd5	99	60.274	Amphilophus_citrinellus
ENSIPUG00000007675	Smpd3	100	59.859	ENSAOCG00000001729	smpd5	99	59.859	Amphiprion_ocellaris
ENSIPUG00000007675	Smpd3	100	59.691	ENSAPEG00000010110	smpd5	99	59.691	Amphiprion_percula
ENSIPUG00000007675	Smpd3	99	60.381	ENSATEG00000005476	smpd5	99	60.381	Anabas_testudineus
ENSIPUG00000007675	Smpd3	82	43.492	ENSACAG00000005338	-	98	43.631	Anolis_carolinensis
ENSIPUG00000007675	Smpd3	100	60.832	ENSACLG00000004150	smpd5	99	60.832	Astatotilapia_calliptera
ENSIPUG00000007675	Smpd3	99	44.103	ENSAMXG00000009000	smpd3	99	44.103	Astyanax_mexicanus
ENSIPUG00000007675	Smpd3	99	69.558	ENSAMXG00000015890	smpd5	100	69.558	Astyanax_mexicanus
ENSIPUG00000007675	Smpd3	58	78.571	ENSBTAG00000015040	-	94	42.105	Bos_taurus
ENSIPUG00000007675	Smpd3	79	46.980	ENSCAFG00020018801	-	91	46.980	Canis_lupus_dingo
ENSIPUG00000007675	Smpd3	90	47.042	ENSCPBG00000007123	-	96	47.042	Chrysemys_picta_bellii
ENSIPUG00000007675	Smpd3	81	48.667	ENSCGRG00001020226	Smpd5	91	48.667	Cricetulus_griseus_chok1gshd
ENSIPUG00000007675	Smpd3	81	48.667	ENSCGRG00000016807	Smpd5	91	48.667	Cricetulus_griseus_crigri
ENSIPUG00000007675	Smpd3	90	57.225	ENSCSEG00000004339	smpd5	92	57.225	Cynoglossus_semilaevis
ENSIPUG00000007675	Smpd3	99	64.779	ENSDARG00000059811	smpd5	99	64.779	Danio_rerio
ENSIPUG00000007675	Smpd3	81	49.329	ENSEASG00005009745	-	92	49.329	Equus_asinus_asinus
ENSIPUG00000007675	Smpd3	81	49.329	ENSECAG00000011998	-	92	49.329	Equus_caballus
ENSIPUG00000007675	Smpd3	99	62.000	ENSELUG00000002998	smpd5	99	62.167	Esox_lucius
ENSIPUG00000007675	Smpd3	99	41.212	ENSFCAG00000023364	SMPD3	93	47.949	Felis_catus
ENSIPUG00000007675	Smpd3	81	58.747	ENSGMOG00000006983	smpd5	100	59.307	Gadus_morhua
ENSIPUG00000007675	Smpd3	99	58.217	ENSGAFG00000005978	smpd5	99	58.217	Gambusia_affinis
ENSIPUG00000007675	Smpd3	81	50.974	ENSGAGG00000010557	-	94	50.974	Gopherus_agassizii
ENSIPUG00000007675	Smpd3	100	60.832	ENSHBUG00000017212	smpd5	99	60.832	Haplochromis_burtoni
ENSIPUG00000007675	Smpd3	99	57.699	ENSHCOG00000005211	smpd5	100	57.522	Hippocampus_comes
ENSIPUG00000007675	Smpd3	87	44.785	ENSSTOG00000026841	-	96	44.785	Ictidomys_tridecemlineatus
ENSIPUG00000007675	Smpd3	83	66.561	ENSKMAG00000014523	smpd5	96	66.561	Kryptolebias_marmoratus
ENSIPUG00000007675	Smpd3	100	60.103	ENSLBEG00000000634	smpd5	99	60.103	Labrus_bergylta
ENSIPUG00000007675	Smpd3	100	60.377	ENSMAMG00000012885	smpd5	99	60.377	Mastacembelus_armatus
ENSIPUG00000007675	Smpd3	100	61.005	ENSMZEG00005014373	smpd5	99	61.005	Maylandia_zebra
ENSIPUG00000007675	Smpd3	83	46.358	ENSMICG00000044882	-	95	46.358	Microcebus_murinus
ENSIPUG00000007675	Smpd3	81	47.987	ENSMOCG00000004813	Smpd5	91	47.987	Microtus_ochrogaster
ENSIPUG00000007675	Smpd3	99	37.368	ENSMODG00000005091	SMPD3	99	37.216	Monodelphis_domestica
ENSIPUG00000007675	Smpd3	86	46.278	ENSMODG00000024098	-	96	46.278	Monodelphis_domestica
ENSIPUG00000007675	Smpd3	81	48.322	ENSMPUG00000007287	-	92	48.322	Mustela_putorius_furo
ENSIPUG00000007675	Smpd3	100	61.179	ENSNBRG00000015871	smpd5	99	61.179	Neolamprologus_brichardi
ENSIPUG00000007675	Smpd3	53	53.896	ENSMEUG00000015228	-	73	54.221	Notamacropus_eugenii
ENSIPUG00000007675	Smpd3	100	60.659	ENSONIG00000003005	smpd5	99	60.659	Oreochromis_niloticus
ENSIPUG00000007675	Smpd3	88	42.120	ENSOANG00000015137	-	96	41.834	Ornithorhynchus_anatinus
ENSIPUG00000007675	Smpd3	99	56.174	ENSORLG00000007890	smpd5	99	56.174	Oryzias_latipes
ENSIPUG00000007675	Smpd3	99	56.696	ENSORLG00020014621	smpd5	99	56.696	Oryzias_latipes_hni
ENSIPUG00000007675	Smpd3	99	56.696	ENSORLG00015020862	smpd5	99	56.696	Oryzias_latipes_hsok
ENSIPUG00000007675	Smpd3	99	56.870	ENSOMEG00000021400	smpd5	99	56.870	Oryzias_melastigma
ENSIPUG00000007675	Smpd3	78	45.079	ENSOARG00000015429	-	85	45.079	Ovis_aries
ENSIPUG00000007675	Smpd3	81	47.000	ENSPPRG00000024542	-	93	47.000	Panthera_pardus
ENSIPUG00000007675	Smpd3	99	41.426	ENSPPRG00000012973	SMPD3	99	41.123	Panthera_pardus
ENSIPUG00000007675	Smpd3	99	44.254	ENSPTIG00000006728	SMPD3	99	44.254	Panthera_tigris_altaica
ENSIPUG00000007675	Smpd3	99	59.895	ENSPKIG00000019783	smpd5	99	59.895	Paramormyrops_kingsleyae
ENSIPUG00000007675	Smpd3	90	52.581	ENSPKIG00000015630	smpd3	82	52.258	Paramormyrops_kingsleyae
ENSIPUG00000007675	Smpd3	99	54.707	ENSPMGG00000011984	smpd5	100	52.743	Periophthalmus_magnuspinnatus
ENSIPUG00000007675	Smpd3	79	45.455	ENSPEMG00000015740	Smpd5	88	45.455	Peromyscus_maniculatus_bairdii
ENSIPUG00000007675	Smpd3	86	47.097	ENSPCIG00000009107	-	92	47.097	Phascolarctos_cinereus
ENSIPUG00000007675	Smpd3	99	56.870	ENSPFOG00000002379	smpd5	99	56.870	Poecilia_formosa
ENSIPUG00000007675	Smpd3	99	56.944	ENSPLAG00000015772	smpd5	99	56.944	Poecilia_latipinna
ENSIPUG00000007675	Smpd3	99	57.168	ENSPMEG00000001599	smpd5	99	57.168	Poecilia_mexicana
ENSIPUG00000007675	Smpd3	99	56.993	ENSPREG00000000831	smpd5	99	56.993	Poecilia_reticulata
ENSIPUG00000007675	Smpd3	100	60.035	ENSPNYG00000015647	smpd5	99	60.035	Pundamilia_nyererei
ENSIPUG00000007675	Smpd3	99	69.489	ENSPNAG00000018539	smpd5	100	69.489	Pygocentrus_nattereri
ENSIPUG00000007675	Smpd3	88	51.768	ENSPNAG00000001774	smpd3	75	51.768	Pygocentrus_nattereri
ENSIPUG00000007675	Smpd3	86	45.345	ENSSHAG00000004065	-	96	45.345	Sarcophilus_harrisii
ENSIPUG00000007675	Smpd3	99	46.154	ENSSHAG00000006412	SMPD3	90	46.154	Sarcophilus_harrisii
ENSIPUG00000007675	Smpd3	100	58.333	ENSSFOG00015000870	smpd5	99	58.333	Scleropages_formosus
ENSIPUG00000007675	Smpd3	99	60.585	ENSSMAG00000020132	smpd5	99	60.585	Scophthalmus_maximus
ENSIPUG00000007675	Smpd3	99	59.107	ENSSDUG00000005881	smpd5	99	59.107	Seriola_dumerili
ENSIPUG00000007675	Smpd3	99	59.107	ENSSLDG00000015320	smpd5	99	59.107	Seriola_lalandi_dorsalis
ENSIPUG00000007675	Smpd3	99	59.541	ENSSPAG00000007973	smpd5	99	59.541	Stegastes_partitus
ENSIPUG00000007675	Smpd3	52	47.651	ENSSSCG00000005922	-	97	47.651	Sus_scrofa
ENSIPUG00000007675	Smpd3	99	57.491	ENSTRUG00000014862	smpd5	99	57.491	Takifugu_rubripes
ENSIPUG00000007675	Smpd3	99	56.597	ENSTNIG00000018420	smpd5	99	56.597	Tetraodon_nigroviridis
ENSIPUG00000007675	Smpd3	90	52.874	ENSXETG00000006675	smpd3	83	52.874	Xenopus_tropicalis
ENSIPUG00000007675	Smpd3	100	44.621	ENSXETG00000031246	-	100	44.444	Xenopus_tropicalis
ENSIPUG00000007675	Smpd3	99	57.093	ENSXCOG00000019783	smpd5	99	57.093	Xiphophorus_couchianus
ENSIPUG00000007675	Smpd3	99	58.082	ENSXMAG00000013998	smpd5	99	58.082	Xiphophorus_maculatus