EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000007697 (Gene tree)
Gene ID: 108256264
Gene Symbol: gpatch3
Alias: zgc:158863
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5494 bases
Position: chr23:18908205-18913698
Accession: 108256264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011322	G-patch	PF01585.23	9.1e-10	1	1
ENSIPUP00000011308	G-patch	PF01585.23	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000011789	-	2723	XM_017452918	ENSIPUP00000011308	514 (aa)	XP_017308407	A0A2D0PQX6
ENSIPUT00000011803	-	930	-	ENSIPUP00000011322	309 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000007697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007697	gpatch3	99	63.376	ENSG00000198746	GPATCH3	95	57.851	Homo_sapiens
ENSIPUG00000007697	gpatch3	99	71.296	ENSAPOG00000001212	gpatch3	97	64.660	Acanthochromis_polyacanthus
ENSIPUG00000007697	gpatch3	99	64.856	ENSAMEG00000010801	GPATCH3	95	53.592	Ailuropoda_melanoleuca
ENSIPUG00000007697	gpatch3	99	75.000	ENSAOCG00000019352	gpatch3	97	66.926	Amphiprion_ocellaris
ENSIPUG00000007697	gpatch3	99	74.691	ENSAPEG00000018926	gpatch3	97	65.049	Amphiprion_percula
ENSIPUG00000007697	gpatch3	99	73.065	ENSATEG00000023759	gpatch3	97	63.359	Anabas_testudineus
ENSIPUG00000007697	gpatch3	99	65.094	ENSAPLG00000010745	GPATCH3	93	64.465	Anas_platyrhynchos
ENSIPUG00000007697	gpatch3	99	62.037	ENSACAG00000016709	GPATCH3	94	51.613	Anolis_carolinensis
ENSIPUG00000007697	gpatch3	99	63.376	ENSANAG00000035944	GPATCH3	96	53.179	Aotus_nancymaae
ENSIPUG00000007697	gpatch3	99	70.427	ENSACLG00000012807	gpatch3	97	64.466	Astatotilapia_calliptera
ENSIPUG00000007697	gpatch3	99	79.032	ENSAMXG00000034582	gpatch3	97	65.631	Astyanax_mexicanus
ENSIPUG00000007697	gpatch3	99	63.782	ENSBTAG00000014849	GPATCH3	95	52.885	Bos_taurus
ENSIPUG00000007697	gpatch3	99	39.769	WBGene00019467	K07B1.7	93	35.478	Caenorhabditis_elegans
ENSIPUG00000007697	gpatch3	99	63.694	ENSCJAG00000010000	GPATCH3	94	53.372	Callithrix_jacchus
ENSIPUG00000007697	gpatch3	99	65.176	ENSCAFG00000012265	GPATCH3	95	52.216	Canis_familiaris
ENSIPUG00000007697	gpatch3	99	65.176	ENSCAFG00020021640	GPATCH3	95	52.216	Canis_lupus_dingo
ENSIPUG00000007697	gpatch3	99	62.821	ENSCHIG00000024245	GPATCH3	94	52.199	Capra_hircus
ENSIPUG00000007697	gpatch3	99	63.694	ENSTSYG00000011753	GPATCH3	95	52.672	Carlito_syrichta
ENSIPUG00000007697	gpatch3	99	59.295	ENSCAPG00000007313	GPATCH3	93	59.236	Cavia_aperea
ENSIPUG00000007697	gpatch3	99	65.064	ENSCPOG00000010404	GPATCH3	95	53.772	Cavia_porcellus
ENSIPUG00000007697	gpatch3	99	63.057	ENSCCAG00000030482	GPATCH3	96	52.794	Cebus_capucinus
ENSIPUG00000007697	gpatch3	99	62.739	ENSCATG00000033598	GPATCH3	95	50.659	Cercocebus_atys
ENSIPUG00000007697	gpatch3	99	64.537	ENSCLAG00000012064	GPATCH3	96	54.702	Chinchilla_lanigera
ENSIPUG00000007697	gpatch3	99	65.094	ENSCPBG00000024968	GPATCH3	93	54.960	Chrysemys_picta_bellii
ENSIPUG00000007697	gpatch3	99	62.420	ENSCANG00000036795	GPATCH3	95	51.429	Colobus_angolensis_palliatus
ENSIPUG00000007697	gpatch3	99	64.331	ENSCGRG00001002930	Gpatch3	94	54.369	Cricetulus_griseus_chok1gshd
ENSIPUG00000007697	gpatch3	99	64.331	ENSCGRG00000004699	Gpatch3	94	54.369	Cricetulus_griseus_crigri
ENSIPUG00000007697	gpatch3	99	72.136	ENSCSEG00000005277	gpatch3	97	64.854	Cynoglossus_semilaevis
ENSIPUG00000007697	gpatch3	99	71.865	ENSCVAG00000000827	gpatch3	97	64.786	Cyprinodon_variegatus
ENSIPUG00000007697	gpatch3	93	86.301	ENSDARG00000052747	gpatch3	65	81.731	Danio_rerio
ENSIPUG00000007697	gpatch3	100	66.139	ENSDNOG00000016999	GPATCH3	95	53.119	Dasypus_novemcinctus
ENSIPUG00000007697	gpatch3	98	52.454	ENSEBUG00000013911	gpatch3	91	44.314	Eptatretus_burgeri
ENSIPUG00000007697	gpatch3	99	64.331	ENSEASG00005008636	GPATCH3	95	52.794	Equus_asinus_asinus
ENSIPUG00000007697	gpatch3	99	64.650	ENSECAG00000007653	GPATCH3	95	52.987	Equus_caballus
ENSIPUG00000007697	gpatch3	99	75.549	ENSELUG00000000963	gpatch3	97	67.123	Esox_lucius
ENSIPUG00000007697	gpatch3	99	64.331	ENSFCAG00000012819	GPATCH3	95	52.500	Felis_catus
ENSIPUG00000007697	gpatch3	99	61.442	ENSFALG00000000319	GPATCH3	92	59.322	Ficedula_albicollis
ENSIPUG00000007697	gpatch3	99	63.578	ENSFDAG00000016270	GPATCH3	95	52.132	Fukomys_damarensis
ENSIPUG00000007697	gpatch3	99	75.974	ENSFHEG00000015264	gpatch3	97	65.370	Fundulus_heteroclitus
ENSIPUG00000007697	gpatch3	99	70.769	ENSGMOG00000000991	gpatch3	96	63.086	Gadus_morhua
ENSIPUG00000007697	gpatch3	99	64.151	ENSGALG00000000881	GPATCH3	92	53.360	Gallus_gallus
ENSIPUG00000007697	gpatch3	99	74.593	ENSGAFG00000002531	gpatch3	96	63.708	Gambusia_affinis
ENSIPUG00000007697	gpatch3	99	72.086	ENSGACG00000007199	gpatch3	97	64.729	Gasterosteus_aculeatus
ENSIPUG00000007697	gpatch3	99	64.151	ENSGAGG00000023286	GPATCH3	93	54.960	Gopherus_agassizii
ENSIPUG00000007697	gpatch3	99	63.376	ENSGGOG00000015305	GPATCH3	95	52.000	Gorilla_gorilla
ENSIPUG00000007697	gpatch3	99	71.692	ENSHBUG00000020513	gpatch3	94	68.661	Haplochromis_burtoni
ENSIPUG00000007697	gpatch3	99	64.309	ENSHGLG00000012492	GPATCH3	97	52.299	Heterocephalus_glaber_female
ENSIPUG00000007697	gpatch3	99	64.309	ENSHGLG00100016909	GPATCH3	97	52.299	Heterocephalus_glaber_male
ENSIPUG00000007697	gpatch3	99	72.755	ENSHCOG00000005739	gpatch3	97	63.065	Hippocampus_comes
ENSIPUG00000007697	gpatch3	99	65.815	ENSSTOG00000015220	GPATCH3	95	53.065	Ictidomys_tridecemlineatus
ENSIPUG00000007697	gpatch3	99	63.376	ENSJJAG00000003292	Gpatch3	96	53.232	Jaculus_jaculus
ENSIPUG00000007697	gpatch3	99	72.086	ENSKMAG00000020717	gpatch3	98	63.289	Kryptolebias_marmoratus
ENSIPUG00000007697	gpatch3	99	72.171	ENSLBEG00000007046	gpatch3	96	65.504	Labrus_bergylta
ENSIPUG00000007697	gpatch3	93	69.953	ENSLACG00000011400	GPATCH3	70	71.014	Latimeria_chalumnae
ENSIPUG00000007697	gpatch3	99	71.154	ENSLOCG00000003858	gpatch3	96	62.279	Lepisosteus_oculatus
ENSIPUG00000007697	gpatch3	99	63.376	ENSLAFG00000016691	GPATCH3	96	54.702	Loxodonta_africana
ENSIPUG00000007697	gpatch3	99	63.057	ENSMFAG00000030918	GPATCH3	95	51.619	Macaca_fascicularis
ENSIPUG00000007697	gpatch3	99	63.376	ENSMMUG00000018723	GPATCH3	95	51.810	Macaca_mulatta
ENSIPUG00000007697	gpatch3	84	49.242	ENSMNEG00000033889	GPATCH3	93	41.314	Macaca_nemestrina
ENSIPUG00000007697	gpatch3	99	63.057	ENSMLEG00000033364	GPATCH3	95	51.810	Mandrillus_leucophaeus
ENSIPUG00000007697	gpatch3	99	72.671	ENSMAMG00000023975	gpatch3	97	62.548	Mastacembelus_armatus
ENSIPUG00000007697	gpatch3	99	70.427	ENSMZEG00005019731	gpatch3	97	64.466	Maylandia_zebra
ENSIPUG00000007697	gpatch3	99	62.893	ENSMGAG00000000813	GPATCH3	93	56.901	Meleagris_gallopavo
ENSIPUG00000007697	gpatch3	99	62.975	ENSMAUG00000002005	Gpatch3	94	54.826	Mesocricetus_auratus
ENSIPUG00000007697	gpatch3	99	63.057	ENSMICG00000015656	GPATCH3	95	52.885	Microcebus_murinus
ENSIPUG00000007697	gpatch3	99	63.578	ENSMOCG00000022375	Gpatch3	94	53.876	Microtus_ochrogaster
ENSIPUG00000007697	gpatch3	99	75.159	ENSMMOG00000008963	gpatch3	89	73.885	Mola_mola
ENSIPUG00000007697	gpatch3	99	62.222	ENSMODG00000014417	GPATCH3	94	52.885	Monodelphis_domestica
ENSIPUG00000007697	gpatch3	100	73.994	ENSMALG00000007586	gpatch3	98	66.538	Monopterus_albus
ENSIPUG00000007697	gpatch3	99	63.694	MGP_CAROLIEiJ_G0026594	Gpatch3	94	54.297	Mus_caroli
ENSIPUG00000007697	gpatch3	99	63.810	ENSMUSG00000028850	Gpatch3	94	55.469	Mus_musculus
ENSIPUG00000007697	gpatch3	99	64.331	MGP_PahariEiJ_G0028927	Gpatch3	94	53.816	Mus_pahari
ENSIPUG00000007697	gpatch3	99	63.376	MGP_SPRETEiJ_G0027575	Gpatch3	99	57.627	Mus_spretus
ENSIPUG00000007697	gpatch3	99	64.537	ENSMPUG00000015665	GPATCH3	95	53.257	Mustela_putorius_furo
ENSIPUG00000007697	gpatch3	99	64.968	ENSMLUG00000023528	GPATCH3	95	53.372	Myotis_lucifugus
ENSIPUG00000007697	gpatch3	99	63.259	ENSNGAG00000006821	Gpatch3	95	53.981	Nannospalax_galili
ENSIPUG00000007697	gpatch3	99	65.909	ENSNBRG00000000365	gpatch3	97	58.333	Neolamprologus_brichardi
ENSIPUG00000007697	gpatch3	99	62.857	ENSNLEG00000009387	GPATCH3	92	51.633	Nomascus_leucogenys
ENSIPUG00000007697	gpatch3	99	64.103	ENSMEUG00000003236	GPATCH3	94	52.987	Notamacropus_eugenii
ENSIPUG00000007697	gpatch3	99	65.176	ENSOPRG00000016429	GPATCH3	95	54.475	Ochotona_princeps
ENSIPUG00000007697	gpatch3	99	63.898	ENSODEG00000003292	GPATCH3	96	52.941	Octodon_degus
ENSIPUG00000007697	gpatch3	99	74.132	ENSONIG00000006771	gpatch3	96	64.038	Oreochromis_niloticus
ENSIPUG00000007697	gpatch3	87	62.409	ENSOCUG00000006411	GPATCH3	97	53.527	Oryctolagus_cuniculus
ENSIPUG00000007697	gpatch3	99	69.876	ENSORLG00000004435	gpatch3	97	61.321	Oryzias_latipes
ENSIPUG00000007697	gpatch3	99	68.580	ENSORLG00020022609	gpatch3	96	64.637	Oryzias_latipes_hni
ENSIPUG00000007697	gpatch3	99	71.753	ENSORLG00015008692	gpatch3	92	71.429	Oryzias_latipes_hsok
ENSIPUG00000007697	gpatch3	99	72.274	ENSOMEG00000010991	gpatch3	96	64.637	Oryzias_melastigma
ENSIPUG00000007697	gpatch3	99	64.650	ENSOGAG00000011647	GPATCH3	97	52.471	Otolemur_garnettii
ENSIPUG00000007697	gpatch3	99	62.821	ENSOARG00000003955	GPATCH3	93	52.500	Ovis_aries
ENSIPUG00000007697	gpatch3	99	63.376	ENSPPAG00000032902	GPATCH3	95	52.190	Pan_paniscus
ENSIPUG00000007697	gpatch3	99	64.650	ENSPPRG00000024244	GPATCH3	95	52.490	Panthera_pardus
ENSIPUG00000007697	gpatch3	99	64.650	ENSPTIG00000014693	GPATCH3	95	52.481	Panthera_tigris_altaica
ENSIPUG00000007697	gpatch3	99	63.376	ENSPTRG00000023419	GPATCH3	95	52.000	Pan_troglodytes
ENSIPUG00000007697	gpatch3	99	63.057	ENSPANG00000007984	GPATCH3	95	51.810	Papio_anubis
ENSIPUG00000007697	gpatch3	99	75.701	ENSPKIG00000020073	gpatch3	96	63.056	Paramormyrops_kingsleyae
ENSIPUG00000007697	gpatch3	99	64.780	ENSPSIG00000017160	GPATCH3	95	58.981	Pelodiscus_sinensis
ENSIPUG00000007697	gpatch3	99	72.727	ENSPMGG00000001703	gpatch3	97	64.078	Periophthalmus_magnuspinnatus
ENSIPUG00000007697	gpatch3	99	64.650	ENSPEMG00000020632	Gpatch3	95	54.702	Peromyscus_maniculatus_bairdii
ENSIPUG00000007697	gpatch3	99	61.006	ENSPCIG00000012681	GPATCH3	94	53.179	Phascolarctos_cinereus
ENSIPUG00000007697	gpatch3	99	73.585	ENSPFOG00000009928	gpatch3	97	65.564	Poecilia_formosa
ENSIPUG00000007697	gpatch3	99	70.732	ENSPLAG00000023784	gpatch3	97	65.759	Poecilia_latipinna
ENSIPUG00000007697	gpatch3	99	71.646	ENSPMEG00000010268	gpatch3	97	65.564	Poecilia_mexicana
ENSIPUG00000007697	gpatch3	99	73.701	ENSPREG00000008873	gpatch3	97	63.495	Poecilia_reticulata
ENSIPUG00000007697	gpatch3	99	63.057	ENSPPYG00000001675	GPATCH3	95	52.000	Pongo_abelii
ENSIPUG00000007697	gpatch3	99	63.462	ENSPCAG00000008286	GPATCH3	95	52.408	Procavia_capensis
ENSIPUG00000007697	gpatch3	99	62.739	ENSPCOG00000020145	GPATCH3	96	51.977	Propithecus_coquereli
ENSIPUG00000007697	gpatch3	99	65.397	ENSPVAG00000017282	GPATCH3	95	48.944	Pteropus_vampyrus
ENSIPUG00000007697	gpatch3	99	70.427	ENSPNYG00000005172	gpatch3	99	64.522	Pundamilia_nyererei
ENSIPUG00000007697	gpatch3	99	79.448	ENSPNAG00000018501	gpatch3	98	74.761	Pygocentrus_nattereri
ENSIPUG00000007697	gpatch3	99	63.898	ENSRNOG00000007097	Gpatch3	94	53.592	Rattus_norvegicus
ENSIPUG00000007697	gpatch3	99	63.057	ENSRBIG00000005853	GPATCH3	95	52.408	Rhinopithecus_bieti
ENSIPUG00000007697	gpatch3	99	62.420	ENSRROG00000038382	GPATCH3	95	51.429	Rhinopithecus_roxellana
ENSIPUG00000007697	gpatch3	99	63.924	ENSSBOG00000019680	GPATCH3	95	57.851	Saimiri_boliviensis_boliviensis
ENSIPUG00000007697	gpatch3	99	63.462	ENSSHAG00000014268	GPATCH3	94	52.874	Sarcophilus_harrisii
ENSIPUG00000007697	gpatch3	99	74.540	ENSSFOG00015009602	gpatch3	97	65.577	Scleropages_formosus
ENSIPUG00000007697	gpatch3	99	76.012	ENSSMAG00000002067	gpatch3	97	64.202	Scophthalmus_maximus
ENSIPUG00000007697	gpatch3	99	73.994	ENSSDUG00000017071	gpatch3	97	63.550	Seriola_dumerili
ENSIPUG00000007697	gpatch3	99	73.994	ENSSLDG00000016549	gpatch3	97	63.359	Seriola_lalandi_dorsalis
ENSIPUG00000007697	gpatch3	99	61.300	ENSSPUG00000018299	GPATCH3	95	55.010	Sphenodon_punctatus
ENSIPUG00000007697	gpatch3	99	72.923	ENSSPAG00000013046	gpatch3	97	67.121	Stegastes_partitus
ENSIPUG00000007697	gpatch3	99	64.968	ENSSSCG00000003564	GPATCH3	92	54.739	Sus_scrofa
ENSIPUG00000007697	gpatch3	99	62.342	ENSTGUG00000000986	GPATCH3	98	54.167	Taeniopygia_guttata
ENSIPUG00000007697	gpatch3	99	70.060	ENSTRUG00000013294	gpatch3	98	62.913	Takifugu_rubripes
ENSIPUG00000007697	gpatch3	99	73.668	ENSTNIG00000009657	gpatch3	99	61.714	Tetraodon_nigroviridis
ENSIPUG00000007697	gpatch3	77	60.526	ENSTBEG00000002042	GPATCH3	83	60.526	Tupaia_belangeri
ENSIPUG00000007697	gpatch3	99	57.962	ENSTTRG00000016677	GPATCH3	84	69.712	Tursiops_truncatus
ENSIPUG00000007697	gpatch3	99	64.762	ENSUAMG00000026235	GPATCH3	95	52.510	Ursus_americanus
ENSIPUG00000007697	gpatch3	99	65.079	ENSUMAG00000011894	GPATCH3	95	52.703	Ursus_maritimus
ENSIPUG00000007697	gpatch3	99	64.217	ENSVVUG00000012041	GPATCH3	95	52.692	Vulpes_vulpes
ENSIPUG00000007697	gpatch3	99	60.323	ENSXETG00000030345	GPATCH3	98	49.416	Xenopus_tropicalis
ENSIPUG00000007697	gpatch3	99	74.026	ENSXCOG00000016129	gpatch3	97	57.895	Xiphophorus_couchianus
ENSIPUG00000007697	gpatch3	99	72.222	ENSXMAG00000010749	gpatch3	97	64.397	Xiphophorus_maculatus