EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000007717 (Gene tree)
Gene ID
108266819
Gene Symbol
u2af2a
Alias
zgc:110115
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
18313 bases
Position
chr1:11133839-11152151
Accession
108266819
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000011355RRM_1PF00076.227.2e-3513
ENSIPUP00000011355RRM_1PF00076.227.2e-3523
ENSIPUP00000011355RRM_1PF00076.227.2e-3533
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000011839-4517XM_017470592ENSIPUP00000011355463 (aa)XP_017326081A0A2D0R7T2
Gene Model
Click here to download ENSIPUG00000007717's gene model file
Pathways
Pathway IDPathway NameSource
ipu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007717's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000007717u2af2a9970.563ENSIPUG00000009844-10068.398
ENSIPUG00000007717u2af2a9987.607ENSIPUG00000009077u2af29986.966
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000007717u2af2a10083.368ENSG00000063244U2AF210092.532Homo_sapiens
ENSIPUG00000007717u2af2a9971.702ENSAPOG00000002208-10071.215Acanthochromis_polyacanthus
ENSIPUG00000007717u2af2a6790.123ENSAPOG00000023155u2af2a10090.123Acanthochromis_polyacanthus
ENSIPUG00000007717u2af2a8086.792ENSAMEG00000003864U2AF210081.643Ailuropoda_melanoleuca
ENSIPUG00000007717u2af2a8676.904ENSACIG00000014173-8378.205Amphilophus_citrinellus
ENSIPUG00000007717u2af2a8394.503ENSACIG00000005749u2af2a9593.154Amphilophus_citrinellus
ENSIPUG00000007717u2af2a9990.909ENSAOCG00000015571u2af2a10090.909Amphiprion_ocellaris
ENSIPUG00000007717u2af2a9971.702ENSAOCG00000003595-10071.215Amphiprion_ocellaris
ENSIPUG00000007717u2af2a8394.503ENSAPEG00000009376u2af2a9094.503Amphiprion_percula
ENSIPUG00000007717u2af2a9472.052ENSAPEG00000020062-8180.577Amphiprion_percula
ENSIPUG00000007717u2af2a8678.894ENSATEG00000020577-8380.577Anabas_testudineus
ENSIPUG00000007717u2af2a10088.421ENSATEG00000022332u2af2a10087.764Anabas_testudineus
ENSIPUG00000007717u2af2a10085.381ENSACAG00000015489U2AF210084.713Anolis_carolinensis
ENSIPUG00000007717u2af2a10080.978ENSANAG00000028042U2AF210087.500Aotus_nancymaae
ENSIPUG00000007717u2af2a10087.712ENSACLG00000022181u2af2a10087.975Astatotilapia_calliptera
ENSIPUG00000007717u2af2a9971.702ENSACLG00000020793-10071.215Astatotilapia_calliptera
ENSIPUG00000007717u2af2a9988.312ENSAMXG00000039454u2af2b9987.662Astyanax_mexicanus
ENSIPUG00000007717u2af2a10091.295ENSAMXG00000033347u2af2a10091.507Astyanax_mexicanus
ENSIPUG00000007717u2af2a10085.745ENSBTAG00000002830U2AF210084.449Bos_taurus
ENSIPUG00000007717u2af2a8758.168WBGene00006697uaf-110054.967Caenorhabditis_elegans
ENSIPUG00000007717u2af2a10082.680ENSCJAG00000017128U2AF210083.438Callithrix_jacchus
ENSIPUG00000007717u2af2a10083.368ENSCAFG00000002551U2AF210084.144Canis_familiaris
ENSIPUG00000007717u2af2a8690.524ENSCAFG00020015445U2AF28191.192Canis_lupus_dingo
ENSIPUG00000007717u2af2a8675.743ENSCHIG00000023595U2AF28476.093Capra_hircus
ENSIPUG00000007717u2af2a10082.680ENSTSYG00000007432U2AF210083.438Carlito_syrichta
ENSIPUG00000007717u2af2a8987.560ENSCAPG00000008466U2AF210083.043Cavia_aperea
ENSIPUG00000007717u2af2a10082.680ENSCPOG00000001582U2AF210083.438Cavia_porcellus
ENSIPUG00000007717u2af2a10082.680ENSCCAG00000023336U2AF210083.438Cebus_capucinus
ENSIPUG00000007717u2af2a10083.368ENSCATG00000004637U2AF210084.144Cercocebus_atys
ENSIPUG00000007717u2af2a10083.368ENSCLAG00000000596U2AF210084.144Chinchilla_lanigera
ENSIPUG00000007717u2af2a10083.368ENSCSAG00000001722U2AF210084.144Chlorocebus_sabaeus
ENSIPUG00000007717u2af2a8488.693ENSCPBG00000004485U2AF210092.532Chrysemys_picta_bellii
ENSIPUG00000007717u2af2a8470.077ENSCING00000003455-8467.971Ciona_intestinalis
ENSIPUG00000007717u2af2a8468.367ENSCSAVG00000006813-9164.539Ciona_savignyi
ENSIPUG00000007717u2af2a9182.648ENSCANG00000031002-9683.488Colobus_angolensis_palliatus
ENSIPUG00000007717u2af2a10076.715ENSCANG00000043845-10078.178Colobus_angolensis_palliatus
ENSIPUG00000007717u2af2a9976.827ENSCGRG00001007486-9977.707Cricetulus_griseus_chok1gshd
ENSIPUG00000007717u2af2a10085.961ENSCGRG00001003185-10084.665Cricetulus_griseus_chok1gshd
ENSIPUG00000007717u2af2a9976.827ENSCGRG00000018587-9977.707Cricetulus_griseus_crigri
ENSIPUG00000007717u2af2a5091.775ENSCGRG00000004524-7987.755Cricetulus_griseus_crigri
ENSIPUG00000007717u2af2a9968.737ENSCSEG00000020504-9468.298Cynoglossus_semilaevis
ENSIPUG00000007717u2af2a7393.038ENSCSEG00000018709u2af2a9593.038Cynoglossus_semilaevis
ENSIPUG00000007717u2af2a10090.497ENSCVAG00000001259u2af2a10090.497Cyprinodon_variegatus
ENSIPUG00000007717u2af2a9971.002ENSCVAG00000023307-10071.215Cyprinodon_variegatus
ENSIPUG00000007717u2af2a10084.615ENSDARG00000011740u2af2b10083.333Danio_rerio
ENSIPUG00000007717u2af2a10093.763ENSDARG00000012505u2af2a10094.409Danio_rerio
ENSIPUG00000007717u2af2a9182.648ENSDNOG00000047039U2AF29683.488Dasypus_novemcinctus
ENSIPUG00000007717u2af2a10082.680ENSDORG00000003250U2af210083.438Dipodomys_ordii
ENSIPUG00000007717u2af2a8253.350FBgn0034834LS28653.350Drosophila_melanogaster
ENSIPUG00000007717u2af2a9265.035FBgn0005411U2af5010069.272Drosophila_melanogaster
ENSIPUG00000007717u2af2a8261.842ENSEBUG00000001732U2AF28461.942Eptatretus_burgeri
ENSIPUG00000007717u2af2a9271.897ENSEBUG00000010917U2AF28476.115Eptatretus_burgeri
ENSIPUG00000007717u2af2a8888.136ENSEASG00005020708U2AF27691.192Equus_asinus_asinus
ENSIPUG00000007717u2af2a10085.961ENSECAG00000010110U2AF210084.665Equus_caballus
ENSIPUG00000007717u2af2a10087.056ENSELUG00000015850u2af2a10086.929Esox_lucius
ENSIPUG00000007717u2af2a10084.764ENSELUG00000022291u2af2b10081.330Esox_lucius
ENSIPUG00000007717u2af2a9969.703ENSELUG00000018459-10070.576Esox_lucius
ENSIPUG00000007717u2af2a10082.680ENSFCAG00000011504U2AF210083.438Felis_catus
ENSIPUG00000007717u2af2a8987.560ENSFDAG00000011264U2AF29683.297Fukomys_damarensis
ENSIPUG00000007717u2af2a10090.497ENSFHEG00000016025u2af2a10090.497Fundulus_heteroclitus
ENSIPUG00000007717u2af2a10089.201ENSGMOG00000004535u2af2a10089.892Gadus_morhua
ENSIPUG00000007717u2af2a9885.000ENSGALG00000052748U2AF26584.314Gallus_gallus
ENSIPUG00000007717u2af2a10090.497ENSGAFG00000013626u2af2a8890.497Gambusia_affinis
ENSIPUG00000007717u2af2a9972.863ENSGAFG00000005628-10070.779Gambusia_affinis
ENSIPUG00000007717u2af2a10092.009ENSGACG00000010632U2AF210091.577Gasterosteus_aculeatus
ENSIPUG00000007717u2af2a9970.921ENSGACG00000014500-10070.316Gasterosteus_aculeatus
ENSIPUG00000007717u2af2a6792.532ENSGAGG00000011849U2AF210092.532Gopherus_agassizii
ENSIPUG00000007717u2af2a5681.008ENSGGOG00000036399-9681.008Gorilla_gorilla
ENSIPUG00000007717u2af2a9971.702ENSHBUG00000017424-10071.215Haplochromis_burtoni
ENSIPUG00000007717u2af2a10087.712ENSHBUG00000013935u2af2a9593.154Haplochromis_burtoni
ENSIPUG00000007717u2af2a10082.680ENSHGLG00000005889U2AF210083.438Heterocephalus_glaber_female
ENSIPUG00000007717u2af2a8987.560ENSHGLG00100004757U2AF210083.043Heterocephalus_glaber_male
ENSIPUG00000007717u2af2a10088.699ENSHCOG00000019367u2af2a10088.913Hippocampus_comes
ENSIPUG00000007717u2af2a10082.680ENSSTOG00000019595U2AF210083.438Ictidomys_tridecemlineatus
ENSIPUG00000007717u2af2a10082.680ENSJJAG00000017705U2af210083.438Jaculus_jaculus
ENSIPUG00000007717u2af2a10087.789ENSKMAG00000005960u2af2a10090.337Kryptolebias_marmoratus
ENSIPUG00000007717u2af2a9769.658ENSLBEG00000005001-8378.205Labrus_bergylta
ENSIPUG00000007717u2af2a10090.929ENSLBEG00000016162u2af2a10090.929Labrus_bergylta
ENSIPUG00000007717u2af2a7991.848ENSLACG00000001648U2AF210091.848Latimeria_chalumnae
ENSIPUG00000007717u2af2a6092.419ENSLOCG00000008050u2af2b9383.891Lepisosteus_oculatus
ENSIPUG00000007717u2af2a9971.667ENSLOCG00000010843-10070.127Lepisosteus_oculatus
ENSIPUG00000007717u2af2a10084.810ENSLAFG00000018056-10084.778Loxodonta_africana
ENSIPUG00000007717u2af2a10074.841ENSLAFG00000028496-10074.841Loxodonta_africana
ENSIPUG00000007717u2af2a10082.680ENSMFAG00000038383U2AF210083.438Macaca_fascicularis
ENSIPUG00000007717u2af2a10082.474ENSMMUG00000004810U2AF210083.229Macaca_mulatta
ENSIPUG00000007717u2af2a10083.368ENSMNEG00000042096U2AF210084.144Macaca_nemestrina
ENSIPUG00000007717u2af2a8988.406ENSMLEG00000032219U2AF27492.147Mandrillus_leucophaeus
ENSIPUG00000007717u2af2a10089.979ENSMAMG00000019817u2af2a10089.339Mastacembelus_armatus
ENSIPUG00000007717u2af2a9970.213ENSMAMG00000020158-10069.915Mastacembelus_armatus
ENSIPUG00000007717u2af2a9971.702ENSMZEG00005023318-10071.215Maylandia_zebra
ENSIPUG00000007717u2af2a10090.929ENSMZEG00005016563u2af2a10090.929Maylandia_zebra
ENSIPUG00000007717u2af2a8987.560ENSMAUG00000008180U2af29883.117Mesocricetus_auratus
ENSIPUG00000007717u2af2a10083.368ENSMICG00000027681U2AF210084.144Microcebus_murinus
ENSIPUG00000007717u2af2a10077.707ENSMOCG00000007227-10076.809Microtus_ochrogaster
ENSIPUG00000007717u2af2a6789.610ENSMOCG00000001018-10089.610Microtus_ochrogaster
ENSIPUG00000007717u2af2a10082.680ENSMOCG00000013214-10083.438Microtus_ochrogaster
ENSIPUG00000007717u2af2a9965.217ENSMMOG00000000531-8475.190Mola_mola
ENSIPUG00000007717u2af2a8394.764ENSMMOG00000016600u2af2a8894.764Mola_mola
ENSIPUG00000007717u2af2a10090.929ENSMALG00000009985u2af2a10090.281Monopterus_albus
ENSIPUG00000007717u2af2a10083.368MGP_CAROLIEiJ_G0029150U2af210084.144Mus_caroli
ENSIPUG00000007717u2af2a10083.368ENSMUSG00000030435U2af210092.532Mus_musculus
ENSIPUG00000007717u2af2a10083.368MGP_PahariEiJ_G0021017U2af210084.144Mus_pahari
ENSIPUG00000007717u2af2a10083.368MGP_SPRETEiJ_G0030203U2af210084.144Mus_spretus
ENSIPUG00000007717u2af2a10083.368ENSMPUG00000007135U2AF210084.144Mustela_putorius_furo
ENSIPUG00000007717u2af2a5185.537ENSMLUG00000011051-10085.537Myotis_lucifugus
ENSIPUG00000007717u2af2a10082.474ENSNGAG00000020369U2af210083.438Nannospalax_galili
ENSIPUG00000007717u2af2a8676.904ENSNBRG00000011100-8378.462Neolamprologus_brichardi
ENSIPUG00000007717u2af2a10087.712ENSNBRG00000002568u2af2a9593.154Neolamprologus_brichardi
ENSIPUG00000007717u2af2a10072.921ENSNLEG00000010562U2AF210092.532Nomascus_leucogenys
ENSIPUG00000007717u2af2a8974.155ENSMEUG00000002346U2AF28477.749Notamacropus_eugenii
ENSIPUG00000007717u2af2a10077.732ENSODEG00000012729-10078.407Octodon_degus
ENSIPUG00000007717u2af2a9963.043ENSODEG00000009254-10063.043Octodon_degus
ENSIPUG00000007717u2af2a10088.075ENSONIG00000012793u2af2a10087.421Oreochromis_niloticus
ENSIPUG00000007717u2af2a9971.702ENSONIG00000009682-10071.215Oreochromis_niloticus
ENSIPUG00000007717u2af2a10088.421ENSORLG00000011545u2af2a10085.443Oryzias_latipes
ENSIPUG00000007717u2af2a10088.421ENSORLG00020006941u2af2a10085.443Oryzias_latipes_hni
ENSIPUG00000007717u2af2a10088.421ENSORLG00015012843u2af2a10085.443Oryzias_latipes_hsok
ENSIPUG00000007717u2af2a10087.579ENSOMEG00000011386u2af2a10086.287Oryzias_melastigma
ENSIPUG00000007717u2af2a9654.120ENSOGAG00000034729-8061.126Otolemur_garnettii
ENSIPUG00000007717u2af2a10082.680ENSOGAG00000007206-10083.438Otolemur_garnettii
ENSIPUG00000007717u2af2a10075.869ENSOARG00000001091U2AF210076.151Ovis_aries
ENSIPUG00000007717u2af2a10082.680ENSPPAG00000039782U2AF210083.438Pan_paniscus
ENSIPUG00000007717u2af2a10082.680ENSPPRG00000013843U2AF210083.438Panthera_pardus
ENSIPUG00000007717u2af2a9876.008ENSPTIG00000005489U2AF28486.305Panthera_tigris_altaica
ENSIPUG00000007717u2af2a10082.680ENSPTRG00000011523U2AF210092.532Pan_troglodytes
ENSIPUG00000007717u2af2a10083.368ENSPANG00000008459U2AF210084.144Papio_anubis
ENSIPUG00000007717u2af2a10085.775ENSPKIG00000024346u2af2b8893.194Paramormyrops_kingsleyae
ENSIPUG00000007717u2af2a9971.158ENSPKIG00000014878-10069.915Paramormyrops_kingsleyae
ENSIPUG00000007717u2af2a8669.492ENSPSIG00000008014U2AF28469.598Pelodiscus_sinensis
ENSIPUG00000007717u2af2a8385.714ENSPMGG00000022980u2af2a10083.297Periophthalmus_magnuspinnatus
ENSIPUG00000007717u2af2a10082.680ENSPEMG00000007378U2af210092.532Peromyscus_maniculatus_bairdii
ENSIPUG00000007717u2af2a8275.584ENSPMAG00000004097u2af2a8476.943Petromyzon_marinus
ENSIPUG00000007717u2af2a10082.268ENSPCIG00000018013U2AF210083.229Phascolarctos_cinereus
ENSIPUG00000007717u2af2a9987.686ENSPFOG00000010799u2af2a10087.526Poecilia_formosa
ENSIPUG00000007717u2af2a9971.922ENSPFOG00000006433-10071.212Poecilia_formosa
ENSIPUG00000007717u2af2a8678.643ENSPLAG00000003275-8479.790Poecilia_latipinna
ENSIPUG00000007717u2af2a10090.497ENSPLAG00000014365u2af2a10090.497Poecilia_latipinna
ENSIPUG00000007717u2af2a8678.392ENSPMEG00000003734-8479.528Poecilia_mexicana
ENSIPUG00000007717u2af2a10090.497ENSPMEG00000002969u2af2a10090.497Poecilia_mexicana
ENSIPUG00000007717u2af2a10087.712ENSPREG00000008739u2af2a10090.787Poecilia_reticulata
ENSIPUG00000007717u2af2a9971.064ENSPREG00000013036-10071.141Poecilia_reticulata
ENSIPUG00000007717u2af2a5990.545ENSPPYG00000010429-7889.928Pongo_abelii
ENSIPUG00000007717u2af2a8477.494ENSPCAG00000003709-9378.215Procavia_capensis
ENSIPUG00000007717u2af2a10068.107ENSPCAG00000014399-10068.619Procavia_capensis
ENSIPUG00000007717u2af2a10082.680ENSPCOG00000025870U2AF210083.438Propithecus_coquereli
ENSIPUG00000007717u2af2a10082.268ENSPVAG00000004540U2AF210083.019Pteropus_vampyrus
ENSIPUG00000007717u2af2a10087.712ENSPNYG00000001438u2af2a9593.154Pundamilia_nyererei
ENSIPUG00000007717u2af2a9971.702ENSPNYG00000011605-10071.215Pundamilia_nyererei
ENSIPUG00000007717u2af2a9989.177ENSPNAG00000027289u2af2b9988.528Pygocentrus_nattereri
ENSIPUG00000007717u2af2a9970.851ENSPNAG00000007182-10071.002Pygocentrus_nattereri
ENSIPUG00000007717u2af2a10095.680ENSPNAG00000017620u2af2a10095.680Pygocentrus_nattereri
ENSIPUG00000007717u2af2a10083.368ENSRNOG00000015914U2af210084.144Rattus_norvegicus
ENSIPUG00000007717u2af2a10082.474ENSRBIG00000041018U2AF210083.229Rhinopithecus_bieti
ENSIPUG00000007717u2af2a10078.378ENSRROG00000031238-10079.070Rhinopithecus_roxellana
ENSIPUG00000007717u2af2a8087.433ENSRROG00000031103-8291.520Rhinopithecus_roxellana
ENSIPUG00000007717u2af2a10083.368ENSSBOG00000023891U2AF210084.144Saimiri_boliviensis_boliviensis
ENSIPUG00000007717u2af2a5277.352ENSSHAG00000001167U2AF26278.598Sarcophilus_harrisii
ENSIPUG00000007717u2af2a9972.304ENSSFOG00015003884-9180.052Scleropages_formosus
ENSIPUG00000007717u2af2a8691.750ENSSFOG00015019182u2af2b8692.932Scleropages_formosus
ENSIPUG00000007717u2af2a9971.702ENSSMAG00000013779-10070.789Scophthalmus_maximus
ENSIPUG00000007717u2af2a10090.281ENSSMAG00000012582u2af2a10090.065Scophthalmus_maximus
ENSIPUG00000007717u2af2a9990.693ENSSDUG00000009457u2af2a10090.693Seriola_dumerili
ENSIPUG00000007717u2af2a8676.528ENSSDUG00000021434-7978.061Seriola_dumerili
ENSIPUG00000007717u2af2a10090.713ENSSLDG00000022742u2af2a10090.713Seriola_lalandi_dorsalis
ENSIPUG00000007717u2af2a8676.528ENSSLDG00000016151-8378.061Seriola_lalandi_dorsalis
ENSIPUG00000007717u2af2a10084.067ENSSPUG00000010229U2AF210083.193Sphenodon_punctatus
ENSIPUG00000007717u2af2a10087.712ENSSPAG00000022519u2af2a10087.975Stegastes_partitus
ENSIPUG00000007717u2af2a9971.915ENSSPAG00000005241-10071.429Stegastes_partitus
ENSIPUG00000007717u2af2a10085.961ENSSSCG00000034815U2AF210084.665Sus_scrofa
ENSIPUG00000007717u2af2a8392.408ENSTRUG00000005514u2af2a9989.038Takifugu_rubripes
ENSIPUG00000007717u2af2a9971.706ENSTNIG00000011257-10070.842Tetraodon_nigroviridis
ENSIPUG00000007717u2af2a10088.819ENSTNIG00000008106U2AF210087.949Tetraodon_nigroviridis
ENSIPUG00000007717u2af2a8083.467ENSTBEG00000009104U2AF29287.172Tupaia_belangeri
ENSIPUG00000007717u2af2a10082.680ENSTTRG00000000987U2AF210083.438Tursiops_truncatus
ENSIPUG00000007717u2af2a8690.500ENSUAMG00000019883U2AF28591.192Ursus_americanus
ENSIPUG00000007717u2af2a8690.500ENSUMAG00000024586U2AF210092.532Ursus_maritimus
ENSIPUG00000007717u2af2a8988.406ENSVVUG00000006956U2AF26981.224Vulpes_vulpes
ENSIPUG00000007717u2af2a10083.475ENSXETG00000019128u2af210082.627Xenopus_tropicalis
ENSIPUG00000007717u2af2a8394.241ENSXCOG00000019406u2af2a10090.766Xiphophorus_couchianus
ENSIPUG00000007717u2af2a10090.497ENSXMAG00000011979u2af2a10090.497Xiphophorus_maculatus
ENSIPUG00000007717u2af2a9970.851ENSXMAG00000000768-9670.127Xiphophorus_maculatus

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