EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007749 (Gene tree)
Gene ID: 108257736
Gene Symbol: hnrnpu
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 12568 bases
Position: chr25:6960081-6972648
Accession: 108257736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011417	SAP	PF02037.27	2.3e-10	1	1
ENSIPUP00000011399	SAP	PF02037.27	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000011903	-	1941	-	ENSIPUP00000011417	646 (aa)	-	-
ENSIPUT00000011883	-	5437	XM_017455710	ENSIPUP00000011399	803 (aa)	XP_017311199	A0A2D0PYT1

Gene Model

Click here to download ENSIPUG00000007749's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007749	hnrnpu	98	43.380	ENSIPUG00000011639	-	62	71.053
ENSIPUG00000007749	hnrnpu	83	35.396	ENSIPUG00000009518	si:ch211-107m4.1	69	39.364
ENSIPUG00000007749	hnrnpu	89	70.270	ENSIPUG00000024012	HNRNPUL1	61	75.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007749	hnrnpu	92	72.549	ENSG00000153187	HNRNPU	99	72.333	Homo_sapiens
ENSIPUG00000007749	hnrnpu	92	83.636	ENSAPOG00000017400	hnrnpub	78	91.489	Acanthochromis_polyacanthus
ENSIPUG00000007749	hnrnpu	95	72.549	ENSAMEG00000009145	HNRNPU	77	78.261	Ailuropoda_melanoleuca
ENSIPUG00000007749	hnrnpu	100	64.084	ENSACIG00000012138	hnrnpub	85	89.130	Amphilophus_citrinellus
ENSIPUG00000007749	hnrnpu	93	81.818	ENSAOCG00000015843	hnrnpub	78	89.362	Amphiprion_ocellaris
ENSIPUG00000007749	hnrnpu	93	81.818	ENSAPEG00000014679	hnrnpub	78	89.362	Amphiprion_percula
ENSIPUG00000007749	hnrnpu	92	83.051	ENSATEG00000016178	hnrnpub	77	93.617	Anabas_testudineus
ENSIPUG00000007749	hnrnpu	93	66.667	ENSACAG00000004511	HNRNPU	77	69.565	Anolis_carolinensis
ENSIPUG00000007749	hnrnpu	92	72.549	ENSANAG00000033895	-	80	78.261	Aotus_nancymaae
ENSIPUG00000007749	hnrnpu	96	78.947	ENSACLG00000008165	hnrnpub	82	91.304	Astatotilapia_calliptera
ENSIPUG00000007749	hnrnpu	92	72.549	ENSBTAG00000007606	HNRNPU	78	78.261	Bos_taurus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSCJAG00000016914	HNRNPU	80	78.261	Callithrix_jacchus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSCAFG00020000918	HNRNPU	73	78.261	Canis_lupus_dingo
ENSIPUG00000007749	hnrnpu	92	72.549	ENSCHIG00000004900	HNRNPU	73	78.261	Capra_hircus
ENSIPUG00000007749	hnrnpu	92	74.510	ENSCPOG00000011887	HNRNPU	78	80.435	Cavia_porcellus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSCCAG00000037859	-	80	78.261	Cebus_capucinus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSCATG00000035273	HNRNPU	80	78.261	Cercocebus_atys
ENSIPUG00000007749	hnrnpu	92	74.510	ENSCLAG00000007100	HNRNPU	78	80.435	Chinchilla_lanigera
ENSIPUG00000007749	hnrnpu	92	72.549	ENSCSAG00000009219	HNRNPU	72	78.261	Chlorocebus_sabaeus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSIPUG00000007749	hnrnpu	96	66.078	ENSCPBG00000009415	HNRNPU	72	76.087	Chrysemys_picta_bellii
ENSIPUG00000007749	hnrnpu	92	72.549	ENSCANG00000022780	HNRNPU	82	78.261	Colobus_angolensis_palliatus
ENSIPUG00000007749	hnrnpu	92	68.421	ENSCGRG00001020525	Hnrnpu	77	83.721	Cricetulus_griseus_chok1gshd
ENSIPUG00000007749	hnrnpu	94	79.661	ENSCSEG00000010804	hnrnpub	86	91.489	Cynoglossus_semilaevis
ENSIPUG00000007749	hnrnpu	80	81.481	ENSCVAG00000004280	hnrnpub	81	89.362	Cyprinodon_variegatus
ENSIPUG00000007749	hnrnpu	93	95.652	ENSDARG00000004735	hnrnpub	81	95.652	Danio_rerio
ENSIPUG00000007749	hnrnpu	91	85.106	ENSDARG00000015206	hnrnpua	80	85.106	Danio_rerio
ENSIPUG00000007749	hnrnpu	84	78.261	ENSDNOG00000000215	HNRNPU	86	78.261	Dasypus_novemcinctus
ENSIPUG00000007749	hnrnpu	92	68.421	ENSDORG00000015491	Hnrnpu	74	83.721	Dipodomys_ordii
ENSIPUG00000007749	hnrnpu	92	72.549	ENSETEG00000014565	HNRNPU	78	78.261	Echinops_telfairi
ENSIPUG00000007749	hnrnpu	93	72.549	ENSEASG00005003017	HNRNPU	74	78.261	Equus_asinus_asinus
ENSIPUG00000007749	hnrnpu	93	72.549	ENSECAG00000007955	HNRNPU	74	78.261	Equus_caballus
ENSIPUG00000007749	hnrnpu	94	91.489	ENSELUG00000011966	hnrnpua	78	91.489	Esox_lucius
ENSIPUG00000007749	hnrnpu	98	81.667	ENSELUG00000010733	hnrnpub	78	93.617	Esox_lucius
ENSIPUG00000007749	hnrnpu	92	72.549	ENSFCAG00000002156	HNRNPU	72	78.261	Felis_catus
ENSIPUG00000007749	hnrnpu	90	74.510	ENSFDAG00000006026	HNRNPU	97	80.435	Fukomys_damarensis
ENSIPUG00000007749	hnrnpu	95	81.481	ENSFHEG00000022639	hnrnpub	78	89.362	Fundulus_heteroclitus
ENSIPUG00000007749	hnrnpu	94	95.918	ENSGMOG00000001755	hnrnpub	78	95.833	Gadus_morhua
ENSIPUG00000007749	hnrnpu	94	68.852	ENSGALG00000010671	HNRNPU	75	78.261	Gallus_gallus
ENSIPUG00000007749	hnrnpu	80	83.636	ENSGAFG00000009369	hnrnpub	76	91.489	Gambusia_affinis
ENSIPUG00000007749	hnrnpu	94	91.667	ENSGACG00000004679	hnrnpub	74	93.617	Gasterosteus_aculeatus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSGGOG00000004061	HNRNPU	80	78.261	Gorilla_gorilla
ENSIPUG00000007749	hnrnpu	92	78.947	ENSHBUG00000012290	hnrnpub	80	91.304	Haplochromis_burtoni
ENSIPUG00000007749	hnrnpu	92	76.471	ENSHGLG00000010594	-	76	80.435	Heterocephalus_glaber_female
ENSIPUG00000007749	hnrnpu	98	65.745	ENSHGLG00100015093	HNRNPU	97	80.435	Heterocephalus_glaber_male
ENSIPUG00000007749	hnrnpu	89	94.595	ENSHCOG00000020091	hnrnpub	76	90.909	Hippocampus_comes
ENSIPUG00000007749	hnrnpu	92	68.421	ENSJJAG00000011371	Hnrnpu	76	83.721	Jaculus_jaculus
ENSIPUG00000007749	hnrnpu	94	77.049	ENSKMAG00000004532	hnrnpub	77	93.617	Kryptolebias_marmoratus
ENSIPUG00000007749	hnrnpu	91	83.636	ENSLBEG00000022520	hnrnpub	77	91.489	Labrus_bergylta
ENSIPUG00000007749	hnrnpu	95	74.074	ENSLACG00000017463	HNRNPU	77	80.000	Latimeria_chalumnae
ENSIPUG00000007749	hnrnpu	98	89.796	ENSLOCG00000016652	hnrnpua	78	91.489	Lepisosteus_oculatus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSLAFG00000021377	HNRNPU	78	78.261	Loxodonta_africana
ENSIPUG00000007749	hnrnpu	92	72.549	ENSMFAG00000037308	HNRNPU	80	78.261	Macaca_fascicularis
ENSIPUG00000007749	hnrnpu	92	72.549	ENSMMUG00000021098	HNRNPU	73	78.261	Macaca_mulatta
ENSIPUG00000007749	hnrnpu	92	72.549	ENSMNEG00000043645	HNRNPU	80	78.261	Macaca_nemestrina
ENSIPUG00000007749	hnrnpu	94	77.966	ENSMAMG00000007196	hnrnpub	100	67.990	Mastacembelus_armatus
ENSIPUG00000007749	hnrnpu	96	78.947	ENSMZEG00005003185	hnrnpub	82	91.304	Maylandia_zebra
ENSIPUG00000007749	hnrnpu	95	68.421	ENSMAUG00000008842	Hnrnpu	77	83.721	Mesocricetus_auratus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSMICG00000004616	HNRNPU	79	78.261	Microcebus_murinus
ENSIPUG00000007749	hnrnpu	95	68.421	ENSMOCG00000015623	Hnrnpu	79	83.721	Microtus_ochrogaster
ENSIPUG00000007749	hnrnpu	91	78.261	ENSMODG00000006515	HNRNPU	77	78.261	Monodelphis_domestica
ENSIPUG00000007749	hnrnpu	96	81.356	ENSMALG00000018243	hnrnpub	80	93.617	Monopterus_albus
ENSIPUG00000007749	hnrnpu	92	68.421	MGP_CAROLIEiJ_G0014962	Hnrnpu	73	83.721	Mus_caroli
ENSIPUG00000007749	hnrnpu	92	68.421	ENSMUSG00000039630	Hnrnpu	73	83.721	Mus_musculus
ENSIPUG00000007749	hnrnpu	92	68.421	MGP_PahariEiJ_G0028193	Hnrnpu	78	83.721	Mus_pahari
ENSIPUG00000007749	hnrnpu	92	68.421	MGP_SPRETEiJ_G0015761	Hnrnpu	73	83.721	Mus_spretus
ENSIPUG00000007749	hnrnpu	96	70.588	ENSMLUG00000000475	HNRNPU	79	76.087	Myotis_lucifugus
ENSIPUG00000007749	hnrnpu	92	68.421	ENSNGAG00000019075	Hnrnpu	73	83.721	Nannospalax_galili
ENSIPUG00000007749	hnrnpu	93	78.947	ENSNBRG00000017855	hnrnpub	80	91.304	Neolamprologus_brichardi
ENSIPUG00000007749	hnrnpu	91	78.261	ENSMEUG00000000541	HNRNPU	77	78.261	Notamacropus_eugenii
ENSIPUG00000007749	hnrnpu	100	64.914	ENSONIG00000001260	hnrnpub	86	71.622	Oreochromis_niloticus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSOCUG00000014469	HNRNPU	72	78.261	Oryctolagus_cuniculus
ENSIPUG00000007749	hnrnpu	92	79.661	ENSORLG00000016114	hnrnpub	78	89.362	Oryzias_latipes
ENSIPUG00000007749	hnrnpu	91	81.481	ENSORLG00020005363	hnrnpub	78	89.362	Oryzias_latipes_hni
ENSIPUG00000007749	hnrnpu	91	81.481	ENSORLG00015001190	hnrnpub	78	89.362	Oryzias_latipes_hsok
ENSIPUG00000007749	hnrnpu	90	86.000	ENSOMEG00000014951	hnrnpub	78	89.362	Oryzias_melastigma
ENSIPUG00000007749	hnrnpu	92	72.549	ENSOGAG00000014024	HNRNPU	73	78.261	Otolemur_garnettii
ENSIPUG00000007749	hnrnpu	92	72.549	ENSOARG00000004985	HNRNPU	85	78.261	Ovis_aries
ENSIPUG00000007749	hnrnpu	92	72.549	ENSPPAG00000038652	HNRNPU	80	78.261	Pan_paniscus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSPPRG00000002662	HNRNPU	79	78.261	Panthera_pardus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSPTRG00000002182	HNRNPU	80	78.261	Pan_troglodytes
ENSIPUG00000007749	hnrnpu	92	72.549	ENSPANG00000011643	HNRNPU	80	78.261	Papio_anubis
ENSIPUG00000007749	hnrnpu	91	95.745	ENSPKIG00000022332	hnrnpub	77	95.745	Paramormyrops_kingsleyae
ENSIPUG00000007749	hnrnpu	95	85.965	ENSPKIG00000006885	hnrnpua	77	97.872	Paramormyrops_kingsleyae
ENSIPUG00000007749	hnrnpu	91	78.261	ENSPCIG00000008657	HNRNPU	77	78.261	Phascolarctos_cinereus
ENSIPUG00000007749	hnrnpu	79	83.333	ENSPFOG00000002908	hnrnpub	77	91.489	Poecilia_formosa
ENSIPUG00000007749	hnrnpu	95	83.333	ENSPLAG00000004160	hnrnpub	77	91.489	Poecilia_latipinna
ENSIPUG00000007749	hnrnpu	92	72.549	ENSPCOG00000018655	-	79	78.261	Propithecus_coquereli
ENSIPUG00000007749	hnrnpu	94	65.719	ENSPCOG00000003883	-	79	76.087	Propithecus_coquereli
ENSIPUG00000007749	hnrnpu	92	72.549	ENSPVAG00000002581	HNRNPU	78	78.261	Pteropus_vampyrus
ENSIPUG00000007749	hnrnpu	93	78.947	ENSPNYG00000021642	hnrnpub	80	91.304	Pundamilia_nyererei
ENSIPUG00000007749	hnrnpu	100	84.178	ENSPNAG00000001055	hnrnpub	100	84.054	Pygocentrus_nattereri
ENSIPUG00000007749	hnrnpu	92	68.421	ENSRNOG00000033790	Hnrnpu	74	83.721	Rattus_norvegicus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSRBIG00000031519	HNRNPU	80	78.261	Rhinopithecus_bieti
ENSIPUG00000007749	hnrnpu	92	72.549	ENSRROG00000041642	HNRNPU	80	78.261	Rhinopithecus_roxellana
ENSIPUG00000007749	hnrnpu	94	95.745	ENSSFOG00015001124	hnrnpub	100	74.174	Scleropages_formosus
ENSIPUG00000007749	hnrnpu	98	78.462	ENSSFOG00015019004	hnrnpu	81	97.872	Scleropages_formosus
ENSIPUG00000007749	hnrnpu	92	81.356	ENSSMAG00000003607	hnrnpub	74	93.617	Scophthalmus_maximus
ENSIPUG00000007749	hnrnpu	94	83.051	ENSSDUG00000005912	hnrnpub	76	93.617	Seriola_dumerili
ENSIPUG00000007749	hnrnpu	96	74.627	ENSSLDG00000004899	hnrnpub	76	93.617	Seriola_lalandi_dorsalis
ENSIPUG00000007749	hnrnpu	90	85.000	ENSSPUG00000011393	HNRNPU	79	78.261	Sphenodon_punctatus
ENSIPUG00000007749	hnrnpu	92	85.455	ENSSPAG00000011853	hnrnpub	80	91.489	Stegastes_partitus
ENSIPUG00000007749	hnrnpu	92	72.549	ENSSSCG00000010877	HNRNPU	78	78.261	Sus_scrofa
ENSIPUG00000007749	hnrnpu	100	64.988	ENSTRUG00000007759	hnrnpub	76	84.783	Takifugu_rubripes
ENSIPUG00000007749	hnrnpu	100	62.954	ENSTNIG00000009725	hnrnpub	92	84.783	Tetraodon_nigroviridis
ENSIPUG00000007749	hnrnpu	96	72.549	ENSUAMG00000021120	HNRNPU	75	85.000	Ursus_americanus
ENSIPUG00000007749	hnrnpu	95	65.385	ENSUMAG00000012322	HNRNPU	84	70.213	Ursus_maritimus
ENSIPUG00000007749	hnrnpu	84	72.549	ENSVPAG00000010520	HNRNPU	82	78.261	Vicugna_pacos
ENSIPUG00000007749	hnrnpu	92	72.549	ENSVVUG00000026524	HNRNPU	73	78.261	Vulpes_vulpes
ENSIPUG00000007749	hnrnpu	98	85.000	ENSXETG00000011386	hnrnpu	73	80.000	Xenopus_tropicalis
ENSIPUG00000007749	hnrnpu	80	83.636	ENSXMAG00000010356	hnrnpub	78	91.489	Xiphophorus_maculatus