EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000007770 (Gene tree)
Gene ID: 108261376
Gene Symbol: -
Alias: -
Full Name: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 19716 bases
Position: chrKV453462.1:993-20708
Accession: 108261376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011416	DEAD	PF00270.29	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000011901	-	1149	XM_017462269	ENSIPUP00000011416	382 (aa)	XP_017317758	-

Gene Model

Click here to download ENSIPUG00000007770's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007770	-	89	81.818	ENSCJAG00000007514	SNRNP200	50	81.844	Callithrix_jacchus
ENSIPUG00000007770	-	89	81.818	ENSCAFG00020019979	SNRNP200	50	81.844	Canis_lupus_dingo
ENSIPUG00000007770	-	89	81.818	ENSTSYG00000010467	SNRNP200	50	81.844	Carlito_syrichta
ENSIPUG00000007770	-	89	81.818	ENSCCAG00000033962	SNRNP200	50	81.844	Cebus_capucinus
ENSIPUG00000007770	-	89	81.818	ENSCATG00000015790	SNRNP200	50	81.844	Cercocebus_atys
ENSIPUG00000007770	-	89	80.938	ENSGAGG00000016069	SNRNP200	57	80.980	Gopherus_agassizii
ENSIPUG00000007770	-	89	81.818	ENSGGOG00000005174	SNRNP200	50	81.844	Gorilla_gorilla
ENSIPUG00000007770	-	89	81.818	ENSMFAG00000040174	SNRNP200	50	81.844	Macaca_fascicularis
ENSIPUG00000007770	-	89	81.818	ENSMMUG00000023261	SNRNP200	50	81.844	Macaca_mulatta
ENSIPUG00000007770	-	89	81.525	ENSMNEG00000032398	SNRNP200	50	81.556	Macaca_nemestrina
ENSIPUG00000007770	-	89	81.818	ENSMLEG00000019083	SNRNP200	50	81.844	Mandrillus_leucophaeus
ENSIPUG00000007770	-	89	81.525	ENSMICG00000004710	SNRNP200	50	81.556	Microcebus_murinus
ENSIPUG00000007770	-	90	81.214	ENSNLEG00000000025	SNRNP200	51	81.214	Nomascus_leucogenys
ENSIPUG00000007770	-	89	81.818	ENSPPAG00000041559	SNRNP200	50	81.844	Pan_paniscus
ENSIPUG00000007770	-	89	81.818	ENSPTRG00000012230	SNRNP200	50	81.844	Pan_troglodytes
ENSIPUG00000007770	-	89	81.818	ENSPANG00000006017	SNRNP200	50	81.844	Papio_anubis
ENSIPUG00000007770	-	89	81.818	ENSPEMG00000020700	-	50	81.844	Peromyscus_maniculatus_bairdii
ENSIPUG00000007770	-	89	81.818	ENSPCOG00000024608	SNRNP200	50	81.844	Propithecus_coquereli
ENSIPUG00000007770	-	89	81.818	ENSRBIG00000044690	-	50	81.844	Rhinopithecus_bieti
ENSIPUG00000007770	-	89	81.818	ENSRROG00000037952	-	50	81.844	Rhinopithecus_roxellana
ENSIPUG00000007770	-	89	81.818	ENSSBOG00000035471	SNRNP200	50	81.844	Saimiri_boliviensis_boliviensis
ENSIPUG00000007770	-	89	87.647	ENSTRUG00000001307	snrnp200	50	87.572	Takifugu_rubripes
ENSIPUG00000007770	-	89	81.818	ENSVVUG00000026247	SNRNP200	50	81.844	Vulpes_vulpes