EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007789 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 43821 bases
Position: chr16:13901543-13945363
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011537	RVT_1	PF00078.27	6.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000011953	-	339	-	ENSIPUP00000011466	112 (aa)	-	-
ENSIPUT00000011969	-	282	-	ENSIPUP00000011482	93 (aa)	-	-
ENSIPUT00000012049	-	423	-	ENSIPUP00000011561	140 (aa)	-	-
ENSIPUT00000012025	-	864	-	ENSIPUP00000011537	287 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000007789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007789	-	54	50.649	ENSIPUG00000006650	-	53	50.649
ENSIPUG00000007789	-	56	60.870	ENSIPUG00000004434	-	79	60.870
ENSIPUG00000007789	-	64	91.848	ENSIPUG00000018566	-	88	91.848
ENSIPUG00000007789	-	64	86.486	ENSIPUG00000017481	-	94	86.486
ENSIPUG00000007789	-	55	78.481	ENSIPUG00000003714	-	67	78.481
ENSIPUG00000007789	-	64	90.270	ENSIPUG00000009893	-	52	90.270
ENSIPUG00000007789	-	72	83.575	ENSIPUG00000004864	-	50	83.575
ENSIPUG00000007789	-	63	88.950	ENSIPUG00000017577	-	91	88.950
ENSIPUG00000007789	-	66	95.213	ENSIPUG00000001254	-	73	95.213
ENSIPUG00000007789	-	54	96.753	ENSIPUG00000013052	-	50	96.753
ENSIPUG00000007789	-	66	95.745	ENSIPUG00000001282	-	67	95.745
ENSIPUG00000007789	-	68	30.500	ENSIPUG00000014149	-	51	30.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007789	-	59	49.721	ENSACIG00000019349	-	74	49.721	Amphilophus_citrinellus
ENSIPUG00000007789	-	68	64.615	ENSAPEG00000000917	-	52	64.615	Amphiprion_percula
ENSIPUG00000007789	-	55	56.688	ENSAPEG00000001164	-	61	56.688	Amphiprion_percula
ENSIPUG00000007789	-	63	59.444	ENSAPEG00000011071	-	52	59.444	Amphiprion_percula
ENSIPUG00000007789	-	55	50.955	ENSAPEG00000008260	-	67	50.955	Amphiprion_percula
ENSIPUG00000007789	-	64	68.852	ENSATEG00000010018	-	54	68.852	Anabas_testudineus
ENSIPUG00000007789	-	64	69.399	ENSATEG00000021051	-	53	69.399	Anabas_testudineus
ENSIPUG00000007789	-	53	76.974	ENSATEG00000024731	-	67	76.974	Anabas_testudineus
ENSIPUG00000007789	-	55	69.811	ENSATEG00000015488	-	51	69.811	Anabas_testudineus
ENSIPUG00000007789	-	59	70.238	ENSATEG00000004853	-	52	70.238	Anabas_testudineus
ENSIPUG00000007789	-	52	70.000	ENSATEG00000018909	-	50	70.000	Anabas_testudineus
ENSIPUG00000007789	-	56	48.148	ENSACAG00000028706	-	63	48.148	Anolis_carolinensis
ENSIPUG00000007789	-	61	55.114	ENSACAG00000028434	-	58	55.114	Anolis_carolinensis
ENSIPUG00000007789	-	68	65.641	ENSACLG00000021354	-	51	65.641	Astatotilapia_calliptera
ENSIPUG00000007789	-	68	64.103	ENSACLG00000003644	-	60	64.103	Astatotilapia_calliptera
ENSIPUG00000007789	-	68	64.103	ENSACLG00000026286	-	52	64.103	Astatotilapia_calliptera
ENSIPUG00000007789	-	68	63.590	ENSACLG00000021947	-	63	63.590	Astatotilapia_calliptera
ENSIPUG00000007789	-	64	72.283	ENSAMXG00000030100	-	50	72.283	Astyanax_mexicanus
ENSIPUG00000007789	-	64	71.196	ENSAMXG00000040990	-	54	71.196	Astyanax_mexicanus
ENSIPUG00000007789	-	63	66.851	ENSDARG00000116065	CR848040.3	59	66.851	Danio_rerio
ENSIPUG00000007789	-	64	64.865	ENSELUG00000018891	-	52	64.865	Esox_lucius
ENSIPUG00000007789	-	62	58.101	ENSELUG00000019648	-	61	58.101	Esox_lucius
ENSIPUG00000007789	-	56	60.870	ENSFHEG00000017568	-	53	60.870	Fundulus_heteroclitus
ENSIPUG00000007789	-	73	52.607	ENSHBUG00000014670	-	65	52.607	Haplochromis_burtoni
ENSIPUG00000007789	-	63	58.333	ENSKMAG00000007346	-	68	58.333	Kryptolebias_marmoratus
ENSIPUG00000007789	-	63	57.778	ENSLBEG00000010233	-	50	57.778	Labrus_bergylta
ENSIPUG00000007789	-	64	69.399	ENSLBEG00000028866	-	58	69.399	Labrus_bergylta
ENSIPUG00000007789	-	63	70.556	ENSLBEG00000009763	-	62	70.556	Labrus_bergylta
ENSIPUG00000007789	-	64	68.306	ENSLBEG00000016484	-	56	68.306	Labrus_bergylta
ENSIPUG00000007789	-	64	68.852	ENSLBEG00000013551	-	66	68.852	Labrus_bergylta
ENSIPUG00000007789	-	53	50.000	ENSLACG00000022147	-	58	50.000	Latimeria_chalumnae
ENSIPUG00000007789	-	53	49.342	ENSLACG00000022149	-	50	49.342	Latimeria_chalumnae
ENSIPUG00000007789	-	65	47.938	ENSLACG00000022236	-	66	47.938	Latimeria_chalumnae
ENSIPUG00000007789	-	53	50.000	ENSLACG00000022344	-	61	50.000	Latimeria_chalumnae
ENSIPUG00000007789	-	53	50.000	ENSLACG00000022619	-	54	50.000	Latimeria_chalumnae
ENSIPUG00000007789	-	53	49.342	ENSLACG00000022505	-	53	49.342	Latimeria_chalumnae
ENSIPUG00000007789	-	62	51.685	ENSLACG00000007146	-	62	51.685	Latimeria_chalumnae
ENSIPUG00000007789	-	62	53.371	ENSLACG00000022527	-	53	53.371	Latimeria_chalumnae
ENSIPUG00000007789	-	63	57.778	ENSMAMG00000011020	-	60	57.778	Mastacembelus_armatus
ENSIPUG00000007789	-	53	54.902	ENSMAMG00000016074	-	62	54.902	Mastacembelus_armatus
ENSIPUG00000007789	-	63	59.444	ENSMAMG00000002714	-	62	59.444	Mastacembelus_armatus
ENSIPUG00000007789	-	64	67.213	ENSMAMG00000008505	-	52	67.213	Mastacembelus_armatus
ENSIPUG00000007789	-	68	65.128	ENSMZEG00005022672	-	61	65.128	Maylandia_zebra
ENSIPUG00000007789	-	51	50.685	ENSMMOG00000010846	-	84	51.408	Mola_mola
ENSIPUG00000007789	-	70	53.465	ENSORLG00000024021	-	75	53.465	Oryzias_latipes
ENSIPUG00000007789	-	67	54.974	ENSORLG00000026083	-	52	54.974	Oryzias_latipes
ENSIPUG00000007789	-	66	53.403	ENSORLG00000025528	-	63	53.403	Oryzias_latipes
ENSIPUG00000007789	-	70	59.204	ENSORLG00000028122	-	59	59.204	Oryzias_latipes
ENSIPUG00000007789	-	70	62.189	ENSORLG00000027998	-	54	62.189	Oryzias_latipes
ENSIPUG00000007789	-	70	61.194	ENSORLG00000026882	-	71	61.194	Oryzias_latipes
ENSIPUG00000007789	-	63	53.889	ENSORLG00000030291	-	55	53.889	Oryzias_latipes
ENSIPUG00000007789	-	63	67.222	ENSORLG00000027051	-	58	67.222	Oryzias_latipes
ENSIPUG00000007789	-	68	61.735	ENSORLG00000027929	-	54	61.421	Oryzias_latipes
ENSIPUG00000007789	-	67	45.128	ENSORLG00020002943	-	89	45.128	Oryzias_latipes_hni
ENSIPUG00000007789	-	62	67.416	ENSORLG00020016174	-	58	67.416	Oryzias_latipes_hni
ENSIPUG00000007789	-	70	61.692	ENSORLG00020015544	-	57	61.692	Oryzias_latipes_hni
ENSIPUG00000007789	-	66	64.737	ENSORLG00020008245	-	59	64.737	Oryzias_latipes_hni
ENSIPUG00000007789	-	70	62.189	ENSORLG00020022160	-	60	62.189	Oryzias_latipes_hni
ENSIPUG00000007789	-	70	62.189	ENSORLG00020007610	-	63	62.189	Oryzias_latipes_hni
ENSIPUG00000007789	-	70	62.189	ENSORLG00020003812	-	51	62.189	Oryzias_latipes_hni
ENSIPUG00000007789	-	70	62.687	ENSORLG00020021067	-	51	62.687	Oryzias_latipes_hni
ENSIPUG00000007789	-	70	61.692	ENSORLG00015020385	-	54	61.692	Oryzias_latipes_hsok
ENSIPUG00000007789	-	63	67.222	ENSORLG00015020409	-	57	67.222	Oryzias_latipes_hsok
ENSIPUG00000007789	-	86	55.020	ENSORLG00015016856	-	73	55.020	Oryzias_latipes_hsok
ENSIPUG00000007789	-	62	49.153	ENSORLG00015016432	-	50	49.153	Oryzias_latipes_hsok
ENSIPUG00000007789	-	61	53.977	ENSORLG00015015384	-	50	53.977	Oryzias_latipes_hsok
ENSIPUG00000007789	-	76	58.929	ENSORLG00015019038	-	67	58.929	Oryzias_latipes_hsok
ENSIPUG00000007789	-	74	57.991	ENSORLG00015022051	-	82	57.991	Oryzias_latipes_hsok
ENSIPUG00000007789	-	70	62.189	ENSORLG00015001218	-	61	62.189	Oryzias_latipes_hsok
ENSIPUG00000007789	-	70	61.692	ENSORLG00015002366	-	63	61.692	Oryzias_latipes_hsok
ENSIPUG00000007789	-	62	54.802	ENSORLG00015006385	-	54	55.114	Oryzias_latipes_hsok
ENSIPUG00000007789	-	73	51.376	ENSOMEG00000014679	-	55	51.376	Oryzias_melastigma
ENSIPUG00000007789	-	63	56.044	ENSOMEG00000023569	-	50	56.044	Oryzias_melastigma
ENSIPUG00000007789	-	63	53.889	ENSOMEG00000016252	-	63	53.889	Oryzias_melastigma
ENSIPUG00000007789	-	54	55.696	ENSPKIG00000017113	-	51	55.696	Paramormyrops_kingsleyae
ENSIPUG00000007789	-	59	50.857	ENSPKIG00000014328	-	56	50.857	Paramormyrops_kingsleyae
ENSIPUG00000007789	-	60	52.907	ENSPKIG00000004473	-	60	52.907	Paramormyrops_kingsleyae
ENSIPUG00000007789	-	55	55.414	ENSPFOG00000024325	-	61	55.414	Poecilia_formosa
ENSIPUG00000007789	-	62	61.798	ENSPNYG00000001533	-	50	61.798	Pundamilia_nyererei
ENSIPUG00000007789	-	78	48.472	ENSPNAG00000002034	-	66	48.472	Pygocentrus_nattereri
ENSIPUG00000007789	-	63	54.945	ENSPNAG00000002585	-	53	54.945	Pygocentrus_nattereri
ENSIPUG00000007789	-	66	74.603	ENSPNAG00000003097	-	63	74.603	Pygocentrus_nattereri
ENSIPUG00000007789	-	66	62.304	ENSPNAG00000000737	-	55	62.304	Pygocentrus_nattereri
ENSIPUG00000007789	-	83	59.350	ENSPNAG00000013546	-	56	59.350	Pygocentrus_nattereri
ENSIPUG00000007789	-	55	49.367	ENSSPAG00000005749	-	50	50.323	Stegastes_partitus
ENSIPUG00000007789	-	53	64.901	ENSTRUG00000020404	-	60	64.901	Takifugu_rubripes