EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007923 (Gene tree)
Gene ID: 108272679
Gene Symbol: setdb1a
Alias: fc07d03|si:ch211-81a5.6|wu:fc07d03
Full Name: histone-lysine N-methyltransferase SETDB1-A-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 19523 bases
Position: chr12:14250462-14269984
Accession: 108272679
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011623	MBD	PF01429.19	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000012112	-	6925	XM_017481269	ENSIPUP00000011623	1418 (aa)	XP_017336758	A0A2D0S1X4

Gene Model

Click here to download ENSIPUG00000007923's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007923	setdb1a	89	40.159	ENSIPUG00000004536	setdb1	60	67.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007923	setdb1a	53	60.494	ENSAPOG00000016228	setdb1b	85	46.802	Acanthochromis_polyacanthus
ENSIPUG00000007923	setdb1a	69	61.875	ENSACIG00000007359	setdb1b	69	47.097	Amphilophus_citrinellus
ENSIPUG00000007923	setdb1a	69	59.172	ENSAPLG00000013908	SETDB1	66	59.172	Anas_platyrhynchos
ENSIPUG00000007923	setdb1a	68	61.875	ENSACLG00000020489	setdb1b	67	46.719	Astatotilapia_calliptera
ENSIPUG00000007923	setdb1a	60	66.265	ENSAMXG00000010030	setdb1a	54	64.409	Astyanax_mexicanus
ENSIPUG00000007923	setdb1a	64	84.536	ENSAMXG00000016168	setdb1b	74	66.906	Astyanax_mexicanus
ENSIPUG00000007923	setdb1a	78	60.355	ENSCAFG00020013596	SETDB1	73	60.355	Canis_lupus_dingo
ENSIPUG00000007923	setdb1a	54	48.120	ENSCAPG00000013619	SETDB1	66	48.120	Cavia_aperea
ENSIPUG00000007923	setdb1a	56	67.606	ENSCATG00000044888	SETDB1	61	67.606	Cercocebus_atys
ENSIPUG00000007923	setdb1a	67	69.925	ENSCHOG00000004013	SETDB1	60	69.925	Choloepus_hoffmanni
ENSIPUG00000007923	setdb1a	71	60.947	ENSCPBG00000008716	SETDB1	69	60.947	Chrysemys_picta_bellii
ENSIPUG00000007923	setdb1a	56	66.901	ENSCANG00000036388	SETDB1	66	66.901	Colobus_angolensis_palliatus
ENSIPUG00000007923	setdb1a	58	40.642	ENSCSEG00000002988	setdb1b	68	47.106	Cynoglossus_semilaevis
ENSIPUG00000007923	setdb1a	71	65.248	ENSDARG00000099021	setdb1b	57	65.957	Danio_rerio
ENSIPUG00000007923	setdb1a	89	57.012	ENSDARG00000041243	setdb1a	83	56.168	Danio_rerio
ENSIPUG00000007923	setdb1a	50	55.305	ENSELUG00000013948	setdb1b	89	45.338	Esox_lucius
ENSIPUG00000007923	setdb1a	78	54.667	ENSELUG00000006204	-	83	45.101	Esox_lucius
ENSIPUG00000007923	setdb1a	60	58.580	ENSGMOG00000005993	setdb1b	74	58.580	Gadus_morhua
ENSIPUG00000007923	setdb1a	69	65.493	ENSGALG00000024051	SETDB1	61	59.172	Gallus_gallus
ENSIPUG00000007923	setdb1a	69	60.355	ENSGAGG00000005348	SETDB1	69	60.355	Gopherus_agassizii
ENSIPUG00000007923	setdb1a	68	61.875	ENSHBUG00000004618	setdb1b	67	46.719	Haplochromis_burtoni
ENSIPUG00000007923	setdb1a	53	60.256	ENSKMAG00000001197	setdb1b	79	47.393	Kryptolebias_marmoratus
ENSIPUG00000007923	setdb1a	61	59.877	ENSLBEG00000025862	setdb1b	67	60.494	Labrus_bergylta
ENSIPUG00000007923	setdb1a	69	58.235	ENSLACG00000011159	SETDB1	61	58.235	Latimeria_chalumnae
ENSIPUG00000007923	setdb1a	68	61.875	ENSMZEG00005016099	setdb1b	67	46.719	Maylandia_zebra
ENSIPUG00000007923	setdb1a	63	65.986	ENSMAUG00000021391	Setdb1	51	65.986	Mesocricetus_auratus
ENSIPUG00000007923	setdb1a	72	67.606	ENSMICG00000000425	SETDB1	50	65.986	Microcebus_murinus
ENSIPUG00000007923	setdb1a	54	59.877	ENSMMOG00000016162	setdb1b	89	46.975	Mola_mola
ENSIPUG00000007923	setdb1a	61	67.606	ENSNGAG00000020151	Setdb1	67	67.606	Nannospalax_galili
ENSIPUG00000007923	setdb1a	77	57.471	ENSMEUG00000000555	-	66	57.471	Notamacropus_eugenii
ENSIPUG00000007923	setdb1a	58	66.901	ENSMEUG00000006544	-	63	66.901	Notamacropus_eugenii
ENSIPUG00000007923	setdb1a	68	61.875	ENSONIG00000006454	setdb1b	60	63.750	Oreochromis_niloticus
ENSIPUG00000007923	setdb1a	60	84.536	ENSORLG00000010602	setdb1b	53	84.536	Oryzias_latipes
ENSIPUG00000007923	setdb1a	60	84.536	ENSORLG00015014543	setdb1b	53	84.536	Oryzias_latipes_hsok
ENSIPUG00000007923	setdb1a	69	63.514	ENSOMEG00000009457	setdb1b	53	84.536	Oryzias_melastigma
ENSIPUG00000007923	setdb1a	66	62.581	ENSPKIG00000010963	setdb1b	51	63.694	Paramormyrops_kingsleyae
ENSIPUG00000007923	setdb1a	58	67.969	ENSPMAG00000001573	setdb1b	57	67.969	Petromyzon_marinus
ENSIPUG00000007923	setdb1a	66	67.606	ENSPFOG00000004429	setdb1b	76	55.769	Poecilia_formosa
ENSIPUG00000007923	setdb1a	68	61.875	ENSPNYG00000003997	setdb1b	87	46.860	Pundamilia_nyererei
ENSIPUG00000007923	setdb1a	87	64.820	ENSPNAG00000003444	setdb1a	67	67.197	Pygocentrus_nattereri
ENSIPUG00000007923	setdb1a	66	64.336	ENSPNAG00000021617	setdb1b	76	65.035	Pygocentrus_nattereri
ENSIPUG00000007923	setdb1a	72	66.197	ENSSHAG00000012701	SETDB1	66	66.197	Sarcophilus_harrisii
ENSIPUG00000007923	setdb1a	70	56.497	ENSSFOG00015022183	setdb1	60	58.101	Scleropages_formosus
ENSIPUG00000007923	setdb1a	57	57.988	ENSSMAG00000015398	setdb1b	70	59.763	Scophthalmus_maximus
ENSIPUG00000007923	setdb1a	69	60.606	ENSSDUG00000007513	setdb1b	59	62.346	Seriola_dumerili
ENSIPUG00000007923	setdb1a	69	60.494	ENSSLDG00000015209	setdb1b	59	62.346	Seriola_lalandi_dorsalis
ENSIPUG00000007923	setdb1a	72	67.606	ENSSSCG00000006645	SETDB1	68	65.986	Sus_scrofa
ENSIPUG00000007923	setdb1a	61	60.355	ENSUAMG00000026724	SETDB1	66	60.355	Ursus_americanus
ENSIPUG00000007923	setdb1a	76	61.176	ENSXCOG00000019497	setdb1b	77	61.765	Xiphophorus_couchianus