EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000007934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 4693 bases
Position: chr17:449935-454627
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000011668	zf-C2H2	PF00096.26	5.1e-27	1	6
ENSIPUP00000011668	zf-C2H2	PF00096.26	5.1e-27	2	6
ENSIPUP00000011668	zf-C2H2	PF00096.26	5.1e-27	3	6
ENSIPUP00000011668	zf-C2H2	PF00096.26	5.1e-27	4	6
ENSIPUP00000011668	zf-C2H2	PF00096.26	5.1e-27	5	6
ENSIPUP00000011668	zf-C2H2	PF00096.26	5.1e-27	6	6
ENSIPUP00000011668	zf-met	PF12874.7	1.2e-06	1	2
ENSIPUP00000011668	zf-met	PF12874.7	1.2e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000012158	-	669	-	ENSIPUP00000011668	222 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000007934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000007934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000007934	-	95	63.750	ENSIPUG00000001941	-	83	63.750
ENSIPUG00000007934	-	99	46.018	ENSIPUG00000004905	znf236	58	46.018
ENSIPUG00000007934	-	98	59.735	ENSIPUG00000006936	-	99	59.901
ENSIPUG00000007934	-	100	66.827	ENSIPUG00000022751	-	98	67.513
ENSIPUG00000007934	-	94	64.171	ENSIPUG00000015601	-	50	64.171
ENSIPUG00000007934	-	94	68.345	ENSIPUG00000012960	-	95	68.345
ENSIPUG00000007934	-	94	64.398	ENSIPUG00000021556	-	87	64.398
ENSIPUG00000007934	-	98	37.879	ENSIPUG00000002075	znf341	50	33.333
ENSIPUG00000007934	-	94	73.684	ENSIPUG00000005581	-	72	73.684
ENSIPUG00000007934	-	90	32.143	ENSIPUG00000024004	-	83	32.143
ENSIPUG00000007934	-	97	46.009	ENSIPUG00000019205	-	74	46.009
ENSIPUG00000007934	-	96	57.619	ENSIPUG00000013315	-	95	57.619
ENSIPUG00000007934	-	99	45.894	ENSIPUG00000011652	znf648	78	45.503
ENSIPUG00000007934	-	96	62.037	ENSIPUG00000021527	-	91	62.037
ENSIPUG00000007934	-	94	59.091	ENSIPUG00000023761	-	60	59.091
ENSIPUG00000007934	-	100	51.429	ENSIPUG00000022266	ZNF135	61	51.429
ENSIPUG00000007934	-	95	65.359	ENSIPUG00000021484	-	97	65.359
ENSIPUG00000007934	-	94	39.706	ENSIPUG00000000131	snai2	50	39.706
ENSIPUG00000007934	-	97	72.350	ENSIPUG00000013065	-	95	73.023
ENSIPUG00000007934	-	96	43.000	ENSIPUG00000003040	zbtb47a	79	43.000
ENSIPUG00000007934	-	98	58.947	ENSIPUG00000005733	-	79	58.947
ENSIPUG00000007934	-	97	38.938	ENSIPUG00000018102	znf646	73	38.938
ENSIPUG00000007934	-	94	40.678	ENSIPUG00000013526	-	86	40.678
ENSIPUG00000007934	-	94	73.620	ENSIPUG00000015294	-	62	73.620
ENSIPUG00000007934	-	96	73.364	ENSIPUG00000021998	-	93	73.364
ENSIPUG00000007934	-	93	45.699	ENSIPUG00000012109	ZN12	51	45.699
ENSIPUG00000007934	-	97	53.333	ENSIPUG00000016009	znf596	66	53.333
ENSIPUG00000007934	-	98	57.971	ENSIPUG00000021434	-	94	57.971
ENSIPUG00000007934	-	95	59.204	ENSIPUG00000003960	-	84	59.204
ENSIPUG00000007934	-	97	62.434	ENSIPUG00000003011	-	55	62.434
ENSIPUG00000007934	-	95	61.376	ENSIPUG00000015233	-	70	61.376
ENSIPUG00000007934	-	97	61.421	ENSIPUG00000021518	-	87	61.421
ENSIPUG00000007934	-	95	64.706	ENSIPUG00000021515	-	86	64.706
ENSIPUG00000007934	-	88	42.487	ENSIPUG00000011399	zbtb47b	73	41.429
ENSIPUG00000007934	-	97	60.000	ENSIPUG00000017575	-	60	60.000
ENSIPUG00000007934	-	96	66.316	ENSIPUG00000009750	-	94	66.316
ENSIPUG00000007934	-	94	68.254	ENSIPUG00000015400	-	94	68.254
ENSIPUG00000007934	-	95	32.843	ENSIPUG00000015037	znf711	51	32.843
ENSIPUG00000007934	-	100	68.182	ENSIPUG00000016075	-	91	68.182
ENSIPUG00000007934	-	95	62.366	ENSIPUG00000015203	-	63	62.366
ENSIPUG00000007934	-	94	67.308	ENSIPUG00000005339	-	83	67.308
ENSIPUG00000007934	-	96	65.054	ENSIPUG00000015177	-	66	65.054
ENSIPUG00000007934	-	99	60.825	ENSIPUG00000021441	-	94	60.825
ENSIPUG00000007934	-	85	41.176	ENSIPUG00000012830	-	77	41.176
ENSIPUG00000007934	-	97	69.856	ENSIPUG00000023688	-	95	68.932
ENSIPUG00000007934	-	99	72.028	ENSIPUG00000011073	-	97	72.028
ENSIPUG00000007934	-	99	61.017	ENSIPUG00000002655	-	98	61.017
ENSIPUG00000007934	-	96	40.271	ENSIPUG00000008581	znf319b	87	43.750
ENSIPUG00000007934	-	98	63.102	ENSIPUG00000021472	-	76	63.102
ENSIPUG00000007934	-	97	40.000	ENSIPUG00000011258	-	87	40.000
ENSIPUG00000007934	-	96	61.340	ENSIPUG00000015121	-	72	61.340
ENSIPUG00000007934	-	98	58.962	ENSIPUG00000006916	-	85	58.962
ENSIPUG00000007934	-	97	66.827	ENSIPUG00000015468	-	92	66.827
ENSIPUG00000007934	-	95	42.038	ENSIPUG00000001248	prdm5	73	42.038
ENSIPUG00000007934	-	98	58.152	ENSIPUG00000004428	-	74	58.152
ENSIPUG00000007934	-	96	61.353	ENSIPUG00000022741	-	79	61.353
ENSIPUG00000007934	-	95	73.333	ENSIPUG00000023635	-	95	70.561
ENSIPUG00000007934	-	96	44.444	ENSIPUG00000007076	-	91	40.187
ENSIPUG00000007934	-	98	32.877	ENSIPUG00000015844	snai1b	57	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000007934	-	95	59.067	ENSATEG00000003344	-	69	59.067	Anabas_testudineus
ENSIPUG00000007934	-	96	51.832	ENSACLG00000019270	-	82	51.832	Astatotilapia_calliptera
ENSIPUG00000007934	-	93	54.500	ENSACLG00000011642	-	78	54.500	Astatotilapia_calliptera
ENSIPUG00000007934	-	96	41.089	ENSCING00000000609	-	98	41.089	Ciona_intestinalis
ENSIPUG00000007934	-	95	53.271	ENSCING00000003072	-	98	53.271	Ciona_intestinalis
ENSIPUG00000007934	-	93	46.875	ENSCING00000020618	-	92	46.875	Ciona_intestinalis
ENSIPUG00000007934	-	97	60.500	ENSDARG00000110710	CU210890.1	96	60.500	Danio_rerio
ENSIPUG00000007934	-	95	53.731	ENSDNOG00000045100	-	97	53.731	Dasypus_novemcinctus
ENSIPUG00000007934	-	95	41.905	ENSEBUG00000015155	-	70	41.905	Eptatretus_burgeri
ENSIPUG00000007934	-	93	52.809	ENSEBUG00000015661	-	73	52.809	Eptatretus_burgeri
ENSIPUG00000007934	-	97	61.364	MGP_CAROLIEiJ_G0015655	-	79	61.364	Mus_caroli
ENSIPUG00000007934	-	93	52.597	ENSSLDG00000006217	-	76	52.597	Seriola_lalandi_dorsalis
ENSIPUG00000007934	-	93	52.597	ENSSLDG00000005868	-	78	52.597	Seriola_lalandi_dorsalis