EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000008085 (Gene tree)
Gene ID
108256547
Gene Symbol
PABPN1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
polyadenylate-binding protein 2-B-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
13658 bases
Position
chr23:3733568-3747225
Accession
108256547
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000011899RRM_1PF00076.221.8e-1711
ENSIPUP00000011912RRM_1PF00076.222.8e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000012407-2846XM_017453525ENSIPUP00000011912287 (aa)XP_017309014-
ENSIPUT00000012394-4080-ENSIPUP00000011899232 (aa)-W5UL51
Gene Model
Click here to download ENSIPUG00000008085's gene model file
Pathways
Pathway IDPathway NameSource
ipu03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008085's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000008085PABPN16033.333ENSIPUG00000006899dazap15133.333
ENSIPUG00000008085PABPN16064.828ENSIPUG00000023583PABPN1L8561.404
ENSIPUG00000008085PABPN110091.379ENSIPUG00000000180-9991.379
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000008085PABPN18683.010ENSG00000100836PABPN19482.738Homo_sapiens
ENSIPUG00000008085PABPN19972.961ENSG00000258643BCL2L2-PABPN17072.961Homo_sapiens
ENSIPUG00000008085PABPN110097.414ENSAPOG00000016425pabpn110097.414Acanthochromis_polyacanthus
ENSIPUG00000008085PABPN18184.737ENSAMEG00000007048BCL2L2-PABPN110084.737Ailuropoda_melanoleuca
ENSIPUG00000008085PABPN19495.928ENSACIG00000021744pabpn110096.591Amphilophus_citrinellus
ENSIPUG00000008085PABPN110097.414ENSAOCG00000015805pabpn110097.414Amphiprion_ocellaris
ENSIPUG00000008085PABPN110097.414ENSAPEG00000009623pabpn110097.414Amphiprion_percula
ENSIPUG00000008085PABPN110097.845ENSATEG00000020531pabpn110097.845Anabas_testudineus
ENSIPUG00000008085PABPN18184.737ENSACAG00000006185-8172.083Anolis_carolinensis
ENSIPUG00000008085PABPN18584.000ENSANAG00000024513-8476.446Aotus_nancymaae
ENSIPUG00000008085PABPN19495.495ENSACLG00000016374pabpn110081.017Astatotilapia_calliptera
ENSIPUG00000008085PABPN110097.854ENSAMXG00000000452pabpn110098.305Astyanax_mexicanus
ENSIPUG00000008085PABPN18584.000ENSBTAG00000006884PABPN18670.833Bos_taurus
ENSIPUG00000008085PABPN18184.375ENSBTAG00000053753-7184.375Bos_taurus
ENSIPUG00000008085PABPN18477.041ENSBTAG00000050594-7483.333Bos_taurus
ENSIPUG00000008085PABPN16259.589WBGene00003904pabp-27558.228Caenorhabditis_elegans
ENSIPUG00000008085PABPN17180.952ENSCJAG00000004407-8480.952Callithrix_jacchus
ENSIPUG00000008085PABPN19976.395ENSCJAG00000007960-8476.824Callithrix_jacchus
ENSIPUG00000008085PABPN18683.010ENSCAFG00000011482PABPN18671.591Canis_familiaris
ENSIPUG00000008085PABPN18683.010ENSCAFG00020007298-8671.212Canis_lupus_dingo
ENSIPUG00000008085PABPN18683.010ENSCAFG00020006651-8671.212Canis_lupus_dingo
ENSIPUG00000008085PABPN18683.010ENSCHIG00000012184PABPN18671.212Capra_hircus
ENSIPUG00000008085PABPN19972.961ENSTSYG00000033996BCL2L2-PABPN19482.738Carlito_syrichta
ENSIPUG00000008085PABPN15982.014ENSCAPG00000009461-9185.156Cavia_aperea
ENSIPUG00000008085PABPN18682.524ENSCPOG00000025574PABPN16882.297Cavia_porcellus
ENSIPUG00000008085PABPN19976.395ENSCCAG00000033954BCL2L2-PABPN18476.824Cebus_capucinus
ENSIPUG00000008085PABPN19976.395ENSCATG00000038536BCL2L2-PABPN18476.824Cercocebus_atys
ENSIPUG00000008085PABPN16582.119ENSCLAG00000012423PABPN15682.119Chinchilla_lanigera
ENSIPUG00000008085PABPN18681.553ENSCSAG00000016036PABPN18670.076Chlorocebus_sabaeus
ENSIPUG00000008085PABPN18973.333ENSCHOG00000004798BCL2L2-PABPN19271.364Choloepus_hoffmanni
ENSIPUG00000008085PABPN17183.929ENSCPBG00000026060-9483.929Chrysemys_picta_bellii
ENSIPUG00000008085PABPN19062.559ENSCING00000012468-8962.085Ciona_intestinalis
ENSIPUG00000008085PABPN17663.483ENSCSAVG00000002001-9361.078Ciona_savignyi
ENSIPUG00000008085PABPN18571.717ENSCANG00000030980-8764.286Colobus_angolensis_palliatus
ENSIPUG00000008085PABPN19972.961ENSCANG00000009750BCL2L2-PABPN19482.738Colobus_angolensis_palliatus
ENSIPUG00000008085PABPN18682.524ENSCGRG00001019696Pabpn19482.143Cricetulus_griseus_chok1gshd
ENSIPUG00000008085PABPN16391.837ENSCGRG00000011102Pabpn19191.837Cricetulus_griseus_crigri
ENSIPUG00000008085PABPN110096.552ENSCSEG00000008774pabpn110096.552Cynoglossus_semilaevis
ENSIPUG00000008085PABPN110092.308ENSCVAG00000003152pabpn110093.590Cyprinodon_variegatus
ENSIPUG00000008085PABPN110098.707ENSDARG00000045373pabpn110099.091Danio_rerio
ENSIPUG00000008085PABPN18154.545ENSDARG00000087996pabpn1l7269.231Danio_rerio
ENSIPUG00000008085PABPN18683.010ENSDNOG00000023682PABPN18671.212Dasypus_novemcinctus
ENSIPUG00000008085PABPN15683.459ENSDORG00000023928-8582.787Dipodomys_ordii
ENSIPUG00000008085PABPN18682.039ENSDORG00000028966-8670.076Dipodomys_ordii
ENSIPUG00000008085PABPN110057.563FBgn0005648Pabp29259.070Drosophila_melanogaster
ENSIPUG00000008085PABPN19972.414ENSEBUG00000002322pabpn19972.414Eptatretus_burgeri
ENSIPUG00000008085PABPN18683.010ENSEASG00005011716PABPN18671.212Equus_asinus_asinus
ENSIPUG00000008085PABPN18582.353ENSECAG00000011652PABPN18171.488Equus_caballus
ENSIPUG00000008085PABPN18680.583ENSEEUG00000012973-7176.555Erinaceus_europaeus
ENSIPUG00000008085PABPN110094.515ENSELUG00000022654pabpn110094.515Esox_lucius
ENSIPUG00000008085PABPN18683.010ENSFCAG00000031922PABPN18671.212Felis_catus
ENSIPUG00000008085PABPN17182.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSIPUG00000008085PABPN110093.534ENSFHEG00000007215pabpn110093.534Fundulus_heteroclitus
ENSIPUG00000008085PABPN19597.738ENSGMOG00000003922pabpn110083.276Gadus_morhua
ENSIPUG00000008085PABPN18382.323ENSGALG00000052930-6182.464Gallus_gallus
ENSIPUG00000008085PABPN110095.726ENSGAFG00000017099pabpn110095.726Gambusia_affinis
ENSIPUG00000008085PABPN19596.364ENSGACG00000002167pabpn110091.093Gasterosteus_aculeatus
ENSIPUG00000008085PABPN18969.231ENSGGOG00000039675-9165.417Gorilla_gorilla
ENSIPUG00000008085PABPN19976.395ENSGGOG00000022683-8476.824Gorilla_gorilla
ENSIPUG00000008085PABPN19466.667ENSGGOG00000025919-9869.128Gorilla_gorilla
ENSIPUG00000008085PABPN110096.983ENSHBUG00000019523pabpn110096.983Haplochromis_burtoni
ENSIPUG00000008085PABPN18682.524ENSHGLG00000002927-9291.837Heterocephalus_glaber_female
ENSIPUG00000008085PABPN17164.072ENSHGLG00000009842-9364.072Heterocephalus_glaber_female
ENSIPUG00000008085PABPN18771.014ENSHGLG00000018588-7075.532Heterocephalus_glaber_female
ENSIPUG00000008085PABPN17170.659ENSHGLG00100018935-9473.256Heterocephalus_glaber_male
ENSIPUG00000008085PABPN18771.014ENSHGLG00100015565-8766.376Heterocephalus_glaber_male
ENSIPUG00000008085PABPN19471.946ENSHGLG00100006673-9291.837Heterocephalus_glaber_male
ENSIPUG00000008085PABPN110096.121ENSHCOG00000004655pabpn110096.121Hippocampus_comes
ENSIPUG00000008085PABPN17182.738ENSSTOG00000029847BCL2L2-PABPN19482.738Ictidomys_tridecemlineatus
ENSIPUG00000008085PABPN17182.738ENSJJAG00000023507Gm205219482.738Jaculus_jaculus
ENSIPUG00000008085PABPN110094.850ENSKMAG00000018748pabpn110093.133Kryptolebias_marmoratus
ENSIPUG00000008085PABPN110097.845ENSLBEG00000027266pabpn110097.845Labrus_bergylta
ENSIPUG00000008085PABPN17588.764ENSLACG00000000646pabpn18185.405Latimeria_chalumnae
ENSIPUG00000008085PABPN19594.545ENSLOCG00000000796pabpn110086.007Lepisosteus_oculatus
ENSIPUG00000008085PABPN19066.822ENSLOCG00000004694pabpn1l9966.822Lepisosteus_oculatus
ENSIPUG00000008085PABPN16582.895ENSLAFG00000031227-10082.895Loxodonta_africana
ENSIPUG00000008085PABPN16174.648ENSMFAG00000031355-9974.648Macaca_fascicularis
ENSIPUG00000008085PABPN19972.961ENSMFAG00000032183BCL2L2-PABPN19482.738Macaca_fascicularis
ENSIPUG00000008085PABPN19972.961ENSMMUG00000014747BCL2L2-PABPN110082.313Macaca_mulatta
ENSIPUG00000008085PABPN18569.000ENSMMUG00000048382-8958.364Macaca_mulatta
ENSIPUG00000008085PABPN19976.395ENSMNEG00000045065BCL2L2-PABPN18476.824Macaca_nemestrina
ENSIPUG00000008085PABPN17968.984ENSMNEG00000035750-9974.648Macaca_nemestrina
ENSIPUG00000008085PABPN19972.961ENSMLEG00000043862BCL2L2-PABPN19482.738Mandrillus_leucophaeus
ENSIPUG00000008085PABPN17266.467ENSMLEG00000034623-9972.535Mandrillus_leucophaeus
ENSIPUG00000008085PABPN19996.507ENSMAMG00000007979pabpn110089.003Mastacembelus_armatus
ENSIPUG00000008085PABPN19597.273ENSMZEG00005011904pabpn110083.904Maylandia_zebra
ENSIPUG00000008085PABPN19972.961ENSMAUG00000007383Gm205218770.992Mesocricetus_auratus
ENSIPUG00000008085PABPN19976.923ENSMICG00000010002BCL2L2-PABPN18477.542Microcebus_murinus
ENSIPUG00000008085PABPN19972.532ENSMOCG00000018557Gm205219091.837Microtus_ochrogaster
ENSIPUG00000008085PABPN110097.414ENSMMOG00000005405pabpn110097.414Mola_mola
ENSIPUG00000008085PABPN18579.703ENSMODG00000004535-8570.498Monodelphis_domestica
ENSIPUG00000008085PABPN19997.817ENSMALG00000019612pabpn110087.329Monopterus_albus
ENSIPUG00000008085PABPN19972.103MGP_CAROLIEiJ_G0019276Gm205217072.103Mus_caroli
ENSIPUG00000008085PABPN18681.553MGP_CAROLIEiJ_G0019277Pabpn19983.436Mus_caroli
ENSIPUG00000008085PABPN19972.532ENSMUSG00000092232Gm205217072.532Mus_musculus
ENSIPUG00000008085PABPN18682.039ENSMUSG00000022194Pabpn19983.436Mus_musculus
ENSIPUG00000008085PABPN19972.532MGP_PahariEiJ_G0030294Gm205217072.532Mus_pahari
ENSIPUG00000008085PABPN18682.039MGP_PahariEiJ_G0030295Pabpn110092.857Mus_pahari
ENSIPUG00000008085PABPN18682.039MGP_SPRETEiJ_G0020166Pabpn19983.436Mus_spretus
ENSIPUG00000008085PABPN19972.532MGP_SPRETEiJ_G0020165Gm205217072.532Mus_spretus
ENSIPUG00000008085PABPN16682.692ENSMPUG00000006775-8784.932Mustela_putorius_furo
ENSIPUG00000008085PABPN18183.684ENSMLUG00000003800-10083.684Myotis_lucifugus
ENSIPUG00000008085PABPN18481.818ENSMLUG00000028677-8573.729Myotis_lucifugus
ENSIPUG00000008085PABPN18880.000ENSMLUG00000012452-8271.429Myotis_lucifugus
ENSIPUG00000008085PABPN19973.391ENSNGAG00000019529Gm205217073.391Nannospalax_galili
ENSIPUG00000008085PABPN19597.273ENSNBRG00000023955pabpn110096.591Neolamprologus_brichardi
ENSIPUG00000008085PABPN16460.811ENSNLEG00000035292-9960.811Nomascus_leucogenys
ENSIPUG00000008085PABPN18669.756ENSNLEG00000030598-7771.053Nomascus_leucogenys
ENSIPUG00000008085PABPN19972.961ENSNLEG00000015007-7482.775Nomascus_leucogenys
ENSIPUG00000008085PABPN18674.384ENSODEG00000003739-8863.786Octodon_degus
ENSIPUG00000008085PABPN17672.626ENSODEG00000011555-8971.429Octodon_degus
ENSIPUG00000008085PABPN19972.532ENSODEG00000002083BCL2L2-PABPN16882.297Octodon_degus
ENSIPUG00000008085PABPN19597.273ENSONIG00000008112pabpn110083.904Oreochromis_niloticus
ENSIPUG00000008085PABPN16384.354ENSOANG00000009218-10084.354Ornithorhynchus_anatinus
ENSIPUG00000008085PABPN18682.524ENSOCUG00000016174PABPN19570.992Oryctolagus_cuniculus
ENSIPUG00000008085PABPN19996.070ENSORLG00000027900pabpn19096.698Oryzias_latipes
ENSIPUG00000008085PABPN19996.070ENSORLG00020004681pabpn110085.616Oryzias_latipes_hni
ENSIPUG00000008085PABPN110096.552ENSORLG00015000018pabpn110096.552Oryzias_latipes_hsok
ENSIPUG00000008085PABPN19597.273ENSOMEG00000016618pabpn110083.562Oryzias_melastigma
ENSIPUG00000008085PABPN18683.010ENSOGAG00000008710PABPN18671.212Otolemur_garnettii
ENSIPUG00000008085PABPN19972.961ENSOARG00000019336BCL2L2-PABPN16472.961Ovis_aries
ENSIPUG00000008085PABPN19972.961ENSPPAG00000028984BCL2L2-PABPN18784.932Pan_paniscus
ENSIPUG00000008085PABPN17167.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSIPUG00000008085PABPN18683.010ENSPPRG00000010567PABPN18671.212Panthera_pardus
ENSIPUG00000008085PABPN17182.738ENSPTIG00000001063BCL2L2-PABPN19482.738Panthera_tigris_altaica
ENSIPUG00000008085PABPN110063.248ENSPTRG00000047273-9360.714Pan_troglodytes
ENSIPUG00000008085PABPN19976.395ENSPTRG00000006167BCL2L28476.824Pan_troglodytes
ENSIPUG00000008085PABPN18569.500ENSPANG00000023326-9975.352Papio_anubis
ENSIPUG00000008085PABPN19976.395ENSPANG00000021100BCL2L2-PABPN18476.824Papio_anubis
ENSIPUG00000008085PABPN19996.070ENSPKIG00000008144-10086.644Paramormyrops_kingsleyae
ENSIPUG00000008085PABPN110091.845ENSPKIG00000018052pabpn110095.279Paramormyrops_kingsleyae
ENSIPUG00000008085PABPN17170.732ENSPKIG00000008340pabpn1l8469.186Paramormyrops_kingsleyae
ENSIPUG00000008085PABPN15876.119ENSPSIG00000011959-8483.478Pelodiscus_sinensis
ENSIPUG00000008085PABPN19598.636ENSPMGG00000022027pabpn18198.636Periophthalmus_magnuspinnatus
ENSIPUG00000008085PABPN19972.961ENSPEMG00000008332Gm205218991.837Peromyscus_maniculatus_bairdii
ENSIPUG00000008085PABPN17976.344ENSPMAG00000006212pabpn19965.854Petromyzon_marinus
ENSIPUG00000008085PABPN18680.488ENSPCIG00000027751-8670.833Phascolarctos_cinereus
ENSIPUG00000008085PABPN110095.299ENSPFOG00000010351pabpn19995.299Poecilia_formosa
ENSIPUG00000008085PABPN19993.506ENSPLAG00000022696pabpn110085.034Poecilia_latipinna
ENSIPUG00000008085PABPN110095.299ENSPMEG00000020856pabpn110095.299Poecilia_mexicana
ENSIPUG00000008085PABPN110095.726ENSPREG00000011278pabpn110095.726Poecilia_reticulata
ENSIPUG00000008085PABPN18182.990ENSPPYG00000005663PABPN18671.488Pongo_abelii
ENSIPUG00000008085PABPN17969.792ENSPCAG00000005902PABPN18260.246Procavia_capensis
ENSIPUG00000008085PABPN19976.923ENSPCOG00000028047BCL2L2-PABPN18477.542Propithecus_coquereli
ENSIPUG00000008085PABPN18881.340ENSPVAG00000005270PABPN18669.962Pteropus_vampyrus
ENSIPUG00000008085PABPN110096.983ENSPNYG00000013182pabpn110096.983Pundamilia_nyererei
ENSIPUG00000008085PABPN18862.802ENSPNAG00000021666pabpn1l8470.175Pygocentrus_nattereri
ENSIPUG00000008085PABPN110098.707ENSPNAG00000023526pabpn110098.707Pygocentrus_nattereri
ENSIPUG00000008085PABPN18682.524ENSRNOG00000042195Pabpn18570.992Rattus_norvegicus
ENSIPUG00000008085PABPN18971.698ENSRBIG00000039547-8266.518Rhinopithecus_bieti
ENSIPUG00000008085PABPN19472.398ENSRBIG00000040762BCL2L2-PABPN15286.905Rhinopithecus_bieti
ENSIPUG00000008085PABPN18871.770ENSRBIG00000042811-9567.841Rhinopithecus_bieti
ENSIPUG00000008085PABPN18868.246ENSRROG00000036409-7065.066Rhinopithecus_roxellana
ENSIPUG00000008085PABPN19472.398ENSRROG00000045535BCL2L2-PABPN19482.738Rhinopithecus_roxellana
ENSIPUG00000008085PABPN19466.964ENSRROG00000040409-8266.964Rhinopithecus_roxellana
ENSIPUG00000008085PABPN19969.106ENSSBOG00000026930BCL2L2-PABPN18784.932Saimiri_boliviensis_boliviensis
ENSIPUG00000008085PABPN18182.011ENSSHAG00000014841-8784.211Sarcophilus_harrisii
ENSIPUG00000008085PABPN19962.605ENSSHAG00000007707-9962.605Sarcophilus_harrisii
ENSIPUG00000008085PABPN110098.276ENSSFOG00015014718pabpn110098.276Scleropages_formosus
ENSIPUG00000008085PABPN110090.987ENSSFOG00015012565pabpn110090.987Scleropages_formosus
ENSIPUG00000008085PABPN16174.648ENSSFOG00015015833pabpn1l7868.639Scleropages_formosus
ENSIPUG00000008085PABPN110097.414ENSSMAG00000020157pabpn110097.414Scophthalmus_maximus
ENSIPUG00000008085PABPN19997.380ENSSDUG00000020582pabpn110086.986Seriola_dumerili
ENSIPUG00000008085PABPN110097.845ENSSLDG00000007118pabpn110097.845Seriola_lalandi_dorsalis
ENSIPUG00000008085PABPN17183.929ENSSPUG00000018308-9483.929Sphenodon_punctatus
ENSIPUG00000008085PABPN110096.137ENSSPAG00000021658pabpn110096.137Stegastes_partitus
ENSIPUG00000008085PABPN19972.961ENSSSCG00000002023PABPN18671.212Sus_scrofa
ENSIPUG00000008085PABPN19263.426ENSSSCG00000034805-7959.524Sus_scrofa
ENSIPUG00000008085PABPN110096.121ENSTRUG00000023664pabpn110096.121Takifugu_rubripes
ENSIPUG00000008085PABPN19291.628ENSTNIG00000005369pabpn19095.876Tetraodon_nigroviridis
ENSIPUG00000008085PABPN18683.010ENSUAMG00000024460PABPN16882.775Ursus_americanus
ENSIPUG00000008085PABPN19972.961ENSUMAG00000014288BCL2L2-PABPN17072.961Ursus_maritimus
ENSIPUG00000008085PABPN19972.961ENSVVUG00000019912BCL2L2-PABPN17683.505Vulpes_vulpes
ENSIPUG00000008085PABPN18485.714ENSXETG00000014597pabpn17382.407Xenopus_tropicalis
ENSIPUG00000008085PABPN17386.628ENSXCOG00000005158pabpn19886.628Xiphophorus_couchianus
ENSIPUG00000008085PABPN110096.154ENSXMAG00000006196pabpn110096.154Xiphophorus_maculatus

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