EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000008166 (Gene tree)
Gene ID: 108256069
Gene Symbol: sub1
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 8590 bases
Position: chr22:6280889-6289478
Accession: 108256069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000012009	PC4	PF02229.16	3.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000012507	-	1748	XM_017452572	ENSIPUP00000012009	125 (aa)	XP_017308061	A0A2D0PRJ9

Gene Model

Click here to download ENSIPUG00000008166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000008166	sub1	100	78.125	ENSIPUG00000024367	SUB1	100	78.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008166	sub1	100	67.717	ENSG00000113387	SUB1	100	70.866	Homo_sapiens
ENSIPUG00000008166	sub1	100	79.200	ENSAPOG00000005917	SUB1	100	79.200	Acanthochromis_polyacanthus
ENSIPUG00000008166	sub1	100	67.717	ENSAMEG00000006238	SUB1	95	70.866	Ailuropoda_melanoleuca
ENSIPUG00000008166	sub1	100	81.600	ENSACIG00000015976	sub1b	100	81.600	Amphilophus_citrinellus
ENSIPUG00000008166	sub1	88	78.182	ENSAOCG00000007313	-	89	78.182	Amphiprion_ocellaris
ENSIPUG00000008166	sub1	84	73.333	ENSAOCG00000002323	-	83	73.333	Amphiprion_ocellaris
ENSIPUG00000008166	sub1	100	80.800	ENSAPEG00000024347	sub1b	100	80.800	Amphiprion_percula
ENSIPUG00000008166	sub1	87	71.171	ENSAPEG00000017151	-	84	72.222	Amphiprion_percula
ENSIPUG00000008166	sub1	70	63.218	ENSAPEG00000014618	-	62	75.385	Amphiprion_percula
ENSIPUG00000008166	sub1	100	80.800	ENSATEG00000010340	sub1b	100	80.800	Anabas_testudineus
ENSIPUG00000008166	sub1	100	64.662	ENSACAG00000007974	SUB1	100	67.669	Anolis_carolinensis
ENSIPUG00000008166	sub1	100	71.429	ENSANAG00000023392	-	83	69.048	Aotus_nancymaae
ENSIPUG00000008166	sub1	100	67.717	ENSANAG00000011651	-	100	70.866	Aotus_nancymaae
ENSIPUG00000008166	sub1	100	81.600	ENSACLG00000016875	sub1b	64	81.600	Astatotilapia_calliptera
ENSIPUG00000008166	sub1	100	85.714	ENSAMXG00000037104	sub1b	100	82.540	Astyanax_mexicanus
ENSIPUG00000008166	sub1	100	67.717	ENSBTAG00000021965	SUB1	100	70.866	Bos_taurus
ENSIPUG00000008166	sub1	50	46.032	WBGene00011743	T13F2.2	80	37.000	Caenorhabditis_elegans
ENSIPUG00000008166	sub1	80	63.725	ENSCJAG00000018718	SUB1	98	67.647	Callithrix_jacchus
ENSIPUG00000008166	sub1	100	65.600	ENSCAFG00000024488	-	100	65.600	Canis_familiaris
ENSIPUG00000008166	sub1	100	67.717	ENSCAFG00000018879	-	88	70.866	Canis_familiaris
ENSIPUG00000008166	sub1	100	67.717	ENSCAFG00000016713	-	96	70.866	Canis_familiaris
ENSIPUG00000008166	sub1	100	70.312	ENSCAFG00020011479	-	77	69.531	Canis_lupus_dingo
ENSIPUG00000008166	sub1	100	67.717	ENSCAFG00020016840	-	100	70.866	Canis_lupus_dingo
ENSIPUG00000008166	sub1	100	67.717	ENSCHIG00000008460	SUB1	100	70.866	Capra_hircus
ENSIPUG00000008166	sub1	100	59.843	ENSTSYG00000035366	-	83	62.992	Carlito_syrichta
ENSIPUG00000008166	sub1	100	63.846	ENSTSYG00000014069	-	93	68.462	Carlito_syrichta
ENSIPUG00000008166	sub1	100	67.717	ENSTSYG00000029948	-	100	70.866	Carlito_syrichta
ENSIPUG00000008166	sub1	100	67.717	ENSCPOG00000031334	SUB1	100	70.866	Cavia_porcellus
ENSIPUG00000008166	sub1	100	65.354	ENSCCAG00000033751	-	95	68.504	Cebus_capucinus
ENSIPUG00000008166	sub1	100	67.717	ENSCCAG00000023605	-	100	70.866	Cebus_capucinus
ENSIPUG00000008166	sub1	100	61.111	ENSCCAG00000017043	-	93	64.286	Cebus_capucinus
ENSIPUG00000008166	sub1	100	64.567	ENSCCAG00000020604	-	100	66.929	Cebus_capucinus
ENSIPUG00000008166	sub1	100	67.717	ENSCATG00000031199	SUB1	100	70.866	Cercocebus_atys
ENSIPUG00000008166	sub1	100	66.406	ENSCLAG00000007522	SUB1	100	70.312	Chinchilla_lanigera
ENSIPUG00000008166	sub1	100	67.717	ENSCSAG00000017172	-	100	70.866	Chlorocebus_sabaeus
ENSIPUG00000008166	sub1	100	66.929	ENSCSAG00000019449	-	100	69.291	Chlorocebus_sabaeus
ENSIPUG00000008166	sub1	100	71.429	ENSCPBG00000024218	SUB1	79	73.810	Chrysemys_picta_bellii
ENSIPUG00000008166	sub1	100	67.717	ENSCANG00000029372	SUB1	100	70.866	Colobus_angolensis_palliatus
ENSIPUG00000008166	sub1	100	56.349	ENSCANG00000028665	-	90	57.143	Colobus_angolensis_palliatus
ENSIPUG00000008166	sub1	54	77.612	ENSCGRG00001016254	-	100	56.800	Cricetulus_griseus_chok1gshd
ENSIPUG00000008166	sub1	100	58.730	ENSCGRG00001014660	-	100	56.000	Cricetulus_griseus_chok1gshd
ENSIPUG00000008166	sub1	100	66.142	ENSCGRG00001003473	-	100	70.079	Cricetulus_griseus_chok1gshd
ENSIPUG00000008166	sub1	100	56.349	ENSCGRG00000001489	-	100	61.111	Cricetulus_griseus_crigri
ENSIPUG00000008166	sub1	100	66.142	ENSCGRG00000001133	-	100	70.079	Cricetulus_griseus_crigri
ENSIPUG00000008166	sub1	100	58.730	ENSCGRG00000019368	-	100	56.000	Cricetulus_griseus_crigri
ENSIPUG00000008166	sub1	100	83.200	ENSDARG00000007720	sub1b	100	83.200	Danio_rerio
ENSIPUG00000008166	sub1	99	78.226	ENSDARG00000053446	sub1a	99	79.032	Danio_rerio
ENSIPUG00000008166	sub1	100	66.142	ENSDNOG00000040794	-	100	69.291	Dasypus_novemcinctus
ENSIPUG00000008166	sub1	100	65.354	ENSDNOG00000032396	-	100	68.504	Dasypus_novemcinctus
ENSIPUG00000008166	sub1	100	66.929	ENSDORG00000013916	Sub1	100	70.866	Dipodomys_ordii
ENSIPUG00000008166	sub1	73	53.763	ENSEBUG00000008746	sub1a	76	41.135	Eptatretus_burgeri
ENSIPUG00000008166	sub1	100	67.717	ENSEASG00005007099	SUB1	100	70.866	Equus_asinus_asinus
ENSIPUG00000008166	sub1	100	67.717	ENSECAG00000012399	SUB1	100	70.866	Equus_caballus
ENSIPUG00000008166	sub1	81	75.490	ENSEEUG00000000436	SUB1	99	75.490	Erinaceus_europaeus
ENSIPUG00000008166	sub1	100	67.717	ENSFCAG00000037288	SUB1	100	70.866	Felis_catus
ENSIPUG00000008166	sub1	100	72.222	ENSFALG00000002143	SUB1	87	74.603	Ficedula_albicollis
ENSIPUG00000008166	sub1	100	67.717	ENSFDAG00000017179	SUB1	100	70.866	Fukomys_damarensis
ENSIPUG00000008166	sub1	100	71.429	ENSGALG00000034905	-	100	73.810	Gallus_gallus
ENSIPUG00000008166	sub1	100	72.222	ENSGALG00000003248	SUB1	100	74.603	Gallus_gallus
ENSIPUG00000008166	sub1	75	52.128	ENSGALG00000027147	-	100	46.094	Gallus_gallus
ENSIPUG00000008166	sub1	100	82.400	ENSGACG00000003912	sub1b	100	82.400	Gasterosteus_aculeatus
ENSIPUG00000008166	sub1	100	72.222	ENSGAGG00000013535	SUB1	100	74.603	Gopherus_agassizii
ENSIPUG00000008166	sub1	100	67.717	ENSGGOG00000040900	SUB1	100	70.866	Gorilla_gorilla
ENSIPUG00000008166	sub1	99	70.968	ENSHBUG00000013953	sub1b	77	81.553	Haplochromis_burtoni
ENSIPUG00000008166	sub1	100	67.717	ENSHGLG00000006749	SUB1	100	70.866	Heterocephalus_glaber_female
ENSIPUG00000008166	sub1	100	67.717	ENSHGLG00100014344	SUB1	100	70.866	Heterocephalus_glaber_male
ENSIPUG00000008166	sub1	100	76.800	ENSHCOG00000001809	sub1b	100	76.800	Hippocampus_comes
ENSIPUG00000008166	sub1	100	68.504	ENSSTOG00000019364	SUB1	100	71.654	Ictidomys_tridecemlineatus
ENSIPUG00000008166	sub1	100	64.567	ENSJJAG00000018885	Sub1	100	66.929	Jaculus_jaculus
ENSIPUG00000008166	sub1	99	80.645	ENSLBEG00000010728	sub1b	99	80.645	Labrus_bergylta
ENSIPUG00000008166	sub1	52	90.769	ENSLACG00000001068	SUB1	100	90.769	Latimeria_chalumnae
ENSIPUG00000008166	sub1	100	74.400	ENSLOCG00000006692	sub1b	100	74.400	Lepisosteus_oculatus
ENSIPUG00000008166	sub1	100	67.717	ENSLAFG00000011006	-	100	70.866	Loxodonta_africana
ENSIPUG00000008166	sub1	100	67.717	ENSLAFG00000032088	-	100	70.866	Loxodonta_africana
ENSIPUG00000008166	sub1	100	59.843	ENSMFAG00000045643	-	61	62.992	Macaca_fascicularis
ENSIPUG00000008166	sub1	100	67.717	ENSMFAG00000040728	SUB1	100	70.866	Macaca_fascicularis
ENSIPUG00000008166	sub1	100	67.717	ENSMMUG00000046181	SUB1	100	70.866	Macaca_mulatta
ENSIPUG00000008166	sub1	100	67.717	ENSMNEG00000037046	SUB1	100	70.866	Macaca_nemestrina
ENSIPUG00000008166	sub1	100	67.717	ENSMLEG00000037017	-	100	70.866	Mandrillus_leucophaeus
ENSIPUG00000008166	sub1	100	66.929	ENSMLEG00000030509	-	94	70.079	Mandrillus_leucophaeus
ENSIPUG00000008166	sub1	100	56.349	ENSMLEG00000043436	-	90	57.937	Mandrillus_leucophaeus
ENSIPUG00000008166	sub1	100	80.800	ENSMAMG00000018428	sub1b	100	80.800	Mastacembelus_armatus
ENSIPUG00000008166	sub1	100	81.600	ENSMZEG00005021252	sub1b	100	81.600	Maylandia_zebra
ENSIPUG00000008166	sub1	100	72.222	ENSMGAG00000002906	SUB1	100	74.603	Meleagris_gallopavo
ENSIPUG00000008166	sub1	100	45.385	ENSMGAG00000001200	-	95	41.732	Meleagris_gallopavo
ENSIPUG00000008166	sub1	100	66.142	ENSMAUG00000020232	Sub1	100	70.079	Mesocricetus_auratus
ENSIPUG00000008166	sub1	100	67.717	ENSMICG00000014535	SUB1	100	70.866	Microcebus_murinus
ENSIPUG00000008166	sub1	100	66.142	ENSMOCG00000018930	-	100	70.079	Microtus_ochrogaster
ENSIPUG00000008166	sub1	100	60.317	ENSMOCG00000016424	-	100	61.111	Microtus_ochrogaster
ENSIPUG00000008166	sub1	83	76.923	ENSMODG00000020410	SUB1	100	66.906	Monodelphis_domestica
ENSIPUG00000008166	sub1	100	80.800	ENSMALG00000007163	sub1b	81	80.800	Monopterus_albus
ENSIPUG00000008166	sub1	100	66.142	MGP_CAROLIEiJ_G0019676	Sub1	100	70.079	Mus_caroli
ENSIPUG00000008166	sub1	100	66.142	ENSMUSG00000022205	Sub1	100	70.079	Mus_musculus
ENSIPUG00000008166	sub1	100	66.929	MGP_PahariEiJ_G0016056	Sub1	100	70.866	Mus_pahari
ENSIPUG00000008166	sub1	100	66.142	MGP_SPRETEiJ_G0020573	Sub1	100	70.079	Mus_spretus
ENSIPUG00000008166	sub1	100	66.929	ENSMPUG00000018418	-	100	70.079	Mustela_putorius_furo
ENSIPUG00000008166	sub1	100	67.717	ENSMPUG00000015185	-	100	70.866	Mustela_putorius_furo
ENSIPUG00000008166	sub1	100	68.504	ENSMLUG00000013685	-	95	71.654	Myotis_lucifugus
ENSIPUG00000008166	sub1	100	65.354	ENSMLUG00000009236	-	95	67.717	Myotis_lucifugus
ENSIPUG00000008166	sub1	100	69.048	ENSNGAG00000010782	-	84	68.254	Nannospalax_galili
ENSIPUG00000008166	sub1	100	60.800	ENSNGAG00000017212	-	100	64.286	Nannospalax_galili
ENSIPUG00000008166	sub1	100	66.142	ENSNGAG00000014072	-	100	70.079	Nannospalax_galili
ENSIPUG00000008166	sub1	83	80.769	ENSNBRG00000008451	sub1b	84	81.553	Neolamprologus_brichardi
ENSIPUG00000008166	sub1	100	66.929	ENSNLEG00000018383	-	95	70.866	Nomascus_leucogenys
ENSIPUG00000008166	sub1	100	66.929	ENSNLEG00000036068	SUB1	100	70.079	Nomascus_leucogenys
ENSIPUG00000008166	sub1	100	64.286	ENSNLEG00000035968	-	100	66.667	Nomascus_leucogenys
ENSIPUG00000008166	sub1	100	70.635	ENSMEUG00000007770	SUB1	100	73.810	Notamacropus_eugenii
ENSIPUG00000008166	sub1	100	66.929	ENSOPRG00000012887	SUB1	100	70.079	Ochotona_princeps
ENSIPUG00000008166	sub1	100	67.717	ENSODEG00000001937	-	100	70.866	Octodon_degus
ENSIPUG00000008166	sub1	86	69.444	ENSODEG00000015114	-	99	67.480	Octodon_degus
ENSIPUG00000008166	sub1	100	63.780	ENSODEG00000014558	-	84	66.142	Octodon_degus
ENSIPUG00000008166	sub1	100	71.429	ENSOANG00000002328	SUB1	95	74.603	Ornithorhynchus_anatinus
ENSIPUG00000008166	sub1	100	66.929	ENSOCUG00000006262	SUB1	60	70.079	Oryctolagus_cuniculus
ENSIPUG00000008166	sub1	100	67.717	ENSOGAG00000009012	-	100	70.866	Otolemur_garnettii
ENSIPUG00000008166	sub1	98	66.935	ENSOGAG00000000337	-	100	70.161	Otolemur_garnettii
ENSIPUG00000008166	sub1	100	67.717	ENSOARG00000012154	SUB1	100	70.866	Ovis_aries
ENSIPUG00000008166	sub1	100	67.717	ENSPPAG00000011212	SUB1	100	70.866	Pan_paniscus
ENSIPUG00000008166	sub1	100	67.717	ENSPPRG00000008557	SUB1	100	70.866	Panthera_pardus
ENSIPUG00000008166	sub1	100	67.717	ENSPTIG00000009466	SUB1	100	70.866	Panthera_tigris_altaica
ENSIPUG00000008166	sub1	100	62.992	ENSPTRG00000041644	-	100	66.142	Pan_troglodytes
ENSIPUG00000008166	sub1	100	67.717	ENSPTRG00000048895	SUB1	100	70.866	Pan_troglodytes
ENSIPUG00000008166	sub1	100	67.717	ENSPANG00000000339	-	97	70.866	Papio_anubis
ENSIPUG00000008166	sub1	100	67.200	ENSPANG00000035601	-	100	67.200	Papio_anubis
ENSIPUG00000008166	sub1	100	67.717	ENSPANG00000002644	-	95	70.866	Papio_anubis
ENSIPUG00000008166	sub1	100	66.142	ENSPANG00000000672	-	91	69.291	Papio_anubis
ENSIPUG00000008166	sub1	100	56.349	ENSPANG00000033272	-	90	56.349	Papio_anubis
ENSIPUG00000008166	sub1	100	77.600	ENSPKIG00000016923	sub1b	100	77.600	Paramormyrops_kingsleyae
ENSIPUG00000008166	sub1	100	70.635	ENSPSIG00000005731	SUB1	95	73.016	Pelodiscus_sinensis
ENSIPUG00000008166	sub1	100	68.254	ENSPCIG00000020827	-	100	66.667	Phascolarctos_cinereus
ENSIPUG00000008166	sub1	100	70.635	ENSPCIG00000020907	-	100	73.810	Phascolarctos_cinereus
ENSIPUG00000008166	sub1	100	65.354	ENSPPYG00000018347	-	100	68.504	Pongo_abelii
ENSIPUG00000008166	sub1	100	67.717	ENSPPYG00000015379	SUB1	100	70.866	Pongo_abelii
ENSIPUG00000008166	sub1	100	67.717	ENSPCOG00000014391	SUB1	100	70.866	Propithecus_coquereli
ENSIPUG00000008166	sub1	100	67.717	ENSPVAG00000004785	SUB1	100	70.866	Pteropus_vampyrus
ENSIPUG00000008166	sub1	100	81.600	ENSPNYG00000010975	sub1b	100	81.600	Pundamilia_nyererei
ENSIPUG00000008166	sub1	100	76.984	ENSPNAG00000008693	sub1a	100	76.984	Pygocentrus_nattereri
ENSIPUG00000008166	sub1	99	85.484	ENSPNAG00000005998	sub1b	99	85.484	Pygocentrus_nattereri
ENSIPUG00000008166	sub1	100	66.929	ENSRNOG00000050563	Sub1	100	70.866	Rattus_norvegicus
ENSIPUG00000008166	sub1	100	69.048	ENSRBIG00000031233	SUB1	100	69.048	Rhinopithecus_bieti
ENSIPUG00000008166	sub1	100	61.905	ENSRROG00000042718	-	90	63.492	Rhinopithecus_roxellana
ENSIPUG00000008166	sub1	100	67.717	ENSRROG00000040438	SUB1	100	70.866	Rhinopithecus_roxellana
ENSIPUG00000008166	sub1	100	67.717	ENSSBOG00000026994	SUB1	100	70.866	Saimiri_boliviensis_boliviensis
ENSIPUG00000008166	sub1	100	70.635	ENSSHAG00000014986	SUB1	100	73.810	Sarcophilus_harrisii
ENSIPUG00000008166	sub1	100	71.654	ENSSFOG00015018386	sub1b	100	74.803	Scleropages_formosus
ENSIPUG00000008166	sub1	100	76.800	ENSSFOG00015017283	sub1b	100	76.800	Scleropages_formosus
ENSIPUG00000008166	sub1	100	80.000	ENSSMAG00000000313	sub1b	100	80.000	Scophthalmus_maximus
ENSIPUG00000008166	sub1	100	81.600	ENSSDUG00000013854	sub1b	76	81.600	Seriola_dumerili
ENSIPUG00000008166	sub1	100	81.600	ENSSLDG00000000852	sub1b	100	81.600	Seriola_lalandi_dorsalis
ENSIPUG00000008166	sub1	100	70.635	ENSSPUG00000016817	SUB1	100	73.016	Sphenodon_punctatus
ENSIPUG00000008166	sub1	100	81.600	ENSSPAG00000019363	sub1b	100	81.600	Stegastes_partitus
ENSIPUG00000008166	sub1	100	67.717	ENSSSCG00000040294	-	87	70.866	Sus_scrofa
ENSIPUG00000008166	sub1	100	67.717	ENSSSCG00000032650	-	100	70.866	Sus_scrofa
ENSIPUG00000008166	sub1	100	71.429	ENSTGUG00000001918	SUB1	100	73.810	Taeniopygia_guttata
ENSIPUG00000008166	sub1	100	80.800	ENSTRUG00000024420	sub1b	100	80.800	Takifugu_rubripes
ENSIPUG00000008166	sub1	100	79.200	ENSTNIG00000002700	sub1b	100	79.200	Tetraodon_nigroviridis
ENSIPUG00000008166	sub1	100	66.929	ENSTBEG00000004053	-	100	70.079	Tupaia_belangeri
ENSIPUG00000008166	sub1	99	63.492	ENSTBEG00000015821	-	100	66.667	Tupaia_belangeri
ENSIPUG00000008166	sub1	100	66.142	ENSTBEG00000001790	-	100	66.929	Tupaia_belangeri
ENSIPUG00000008166	sub1	100	67.717	ENSTBEG00000012861	-	100	67.717	Tupaia_belangeri
ENSIPUG00000008166	sub1	100	66.929	ENSTBEG00000011247	-	99	66.929	Tupaia_belangeri
ENSIPUG00000008166	sub1	100	66.929	ENSTBEG00000006504	-	100	70.079	Tupaia_belangeri
ENSIPUG00000008166	sub1	81	74.510	ENSTTRG00000017324	SUB1	99	74.510	Tursiops_truncatus
ENSIPUG00000008166	sub1	100	67.717	ENSUAMG00000000182	SUB1	100	70.866	Ursus_americanus
ENSIPUG00000008166	sub1	100	67.717	ENSUMAG00000013792	SUB1	100	70.866	Ursus_maritimus
ENSIPUG00000008166	sub1	100	64.286	ENSVPAG00000011012	SUB1	100	67.460	Vicugna_pacos
ENSIPUG00000008166	sub1	89	60.177	ENSVVUG00000025193	-	95	63.717	Vulpes_vulpes
ENSIPUG00000008166	sub1	100	67.717	ENSVVUG00000022166	-	100	70.866	Vulpes_vulpes
ENSIPUG00000008166	sub1	100	71.875	ENSXETG00000027218	sub1	100	75.781	Xenopus_tropicalis