EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000008204 (Gene tree)
Gene ID: 108262155
Gene Symbol: npm3
Alias: cb581|fb75f02|sb:cb581|wu:fb75f02|zgc:113084
Full Name: nucleoplasmin-like protein NO29
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 8871 bases
Position: chr3:22629783-22638653
Accession: 108262155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000012051	Nucleoplasmin	PF03066.15	1.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000012552	-	3486	XM_017462778	ENSIPUP00000012051	156 (aa)	XP_017318267	A0A2D0QIX3

Gene Model

Click here to download ENSIPUG00000008204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000008204	npm3	65	38.235	ENSIPUG00000013175	npm2b	57	39.394
ENSIPUG00000008204	npm3	69	40.741	ENSIPUG00000010101	npm2a	63	43.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008204	npm3	87	48.936	ENSG00000107833	NPM3	79	51.064	Homo_sapiens
ENSIPUG00000008204	npm3	99	70.552	ENSAPOG00000013083	npm3	99	69.325	Acanthochromis_polyacanthus
ENSIPUG00000008204	npm3	65	48.544	ENSAMEG00000019414	-	61	48.544	Ailuropoda_melanoleuca
ENSIPUG00000008204	npm3	87	47.857	ENSAMEG00000017639	-	61	54.630	Ailuropoda_melanoleuca
ENSIPUG00000008204	npm3	86	74.265	ENSACIG00000022586	npm3	84	74.265	Amphilophus_citrinellus
ENSIPUG00000008204	npm3	99	71.429	ENSAOCG00000009376	npm3	99	71.429	Amphiprion_ocellaris
ENSIPUG00000008204	npm3	99	71.429	ENSAPEG00000015863	npm3	99	71.429	Amphiprion_percula
ENSIPUG00000008204	npm3	99	71.779	ENSATEG00000022752	npm3	99	71.779	Anabas_testudineus
ENSIPUG00000008204	npm3	83	47.015	ENSAPLG00000010935	NPM3	87	46.269	Anas_platyrhynchos
ENSIPUG00000008204	npm3	85	48.936	ENSACAG00000011936	NPM3	85	51.064	Anolis_carolinensis
ENSIPUG00000008204	npm3	84	49.618	ENSANAG00000033290	-	78	46.970	Aotus_nancymaae
ENSIPUG00000008204	npm3	67	53.333	ENSANAG00000023070	-	68	52.830	Aotus_nancymaae
ENSIPUG00000008204	npm3	87	50.000	ENSANAG00000027082	-	80	50.000	Aotus_nancymaae
ENSIPUG00000008204	npm3	72	50.000	ENSANAG00000023832	-	51	51.852	Aotus_nancymaae
ENSIPUG00000008204	npm3	99	72.050	ENSACLG00000007854	npm3	99	72.050	Astatotilapia_calliptera
ENSIPUG00000008204	npm3	69	95.370	ENSAMXG00000039828	npm3	57	93.636	Astyanax_mexicanus
ENSIPUG00000008204	npm3	97	44.172	ENSBTAG00000016335	NPM3	76	48.120	Bos_taurus
ENSIPUG00000008204	npm3	99	45.509	ENSCJAG00000017650	NPM3	80	50.000	Callithrix_jacchus
ENSIPUG00000008204	npm3	87	49.640	ENSCAFG00000009919	NPM3	53	54.630	Canis_familiaris
ENSIPUG00000008204	npm3	87	49.640	ENSCAFG00020009185	NPM3	61	54.630	Canis_lupus_dingo
ENSIPUG00000008204	npm3	87	36.029	ENSCHIG00000016052	-	77	35.338	Capra_hircus
ENSIPUG00000008204	npm3	97	44.785	ENSCHIG00000024055	-	76	48.120	Capra_hircus
ENSIPUG00000008204	npm3	76	37.288	ENSCAPG00000016606	NPM3	71	39.286	Cavia_aperea
ENSIPUG00000008204	npm3	87	53.676	ENSCPOG00000006301	NPM3	79	52.593	Cavia_porcellus
ENSIPUG00000008204	npm3	84	45.985	ENSCCAG00000029457	-	77	45.985	Cebus_capucinus
ENSIPUG00000008204	npm3	87	47.887	ENSCCAG00000031043	-	80	50.000	Cebus_capucinus
ENSIPUG00000008204	npm3	87	48.936	ENSCATG00000013755	NPM3	79	51.064	Cercocebus_atys
ENSIPUG00000008204	npm3	87	48.936	ENSCSAG00000005509	NPM3	79	51.064	Chlorocebus_sabaeus
ENSIPUG00000008204	npm3	99	45.455	ENSCPBG00000003817	NPM3	97	45.455	Chrysemys_picta_bellii
ENSIPUG00000008204	npm3	87	50.714	ENSCANG00000020300	NPM3	61	54.630	Colobus_angolensis_palliatus
ENSIPUG00000008204	npm3	71	55.455	ENSCGRG00001013345	Npm3	63	55.455	Cricetulus_griseus_chok1gshd
ENSIPUG00000008204	npm3	76	51.695	ENSCGRG00000015351	Npm3	73	51.695	Cricetulus_griseus_crigri
ENSIPUG00000008204	npm3	99	65.269	ENSCSEG00000007944	npm3	99	68.263	Cynoglossus_semilaevis
ENSIPUG00000008204	npm3	83	72.388	ENSCVAG00000003305	npm3	99	68.675	Cyprinodon_variegatus
ENSIPUG00000008204	npm3	100	78.528	ENSDARG00000103594	npm3	100	78.528	Danio_rerio
ENSIPUG00000008204	npm3	87	48.571	ENSDORG00000003491	Npm3	80	47.143	Dipodomys_ordii
ENSIPUG00000008204	npm3	79	47.328	ENSETEG00000006307	NPM3	94	44.311	Echinops_telfairi
ENSIPUG00000008204	npm3	87	47.857	ENSEASG00005008834	NPM3	61	54.630	Equus_asinus_asinus
ENSIPUG00000008204	npm3	87	47.857	ENSECAG00000007524	NPM3	61	54.630	Equus_caballus
ENSIPUG00000008204	npm3	83	78.030	ENSELUG00000021730	npm3	94	75.658	Esox_lucius
ENSIPUG00000008204	npm3	87	47.857	ENSFCAG00000007178	NPM3	61	53.704	Felis_catus
ENSIPUG00000008204	npm3	84	50.376	ENSFALG00000008586	NPM3	84	49.254	Ficedula_albicollis
ENSIPUG00000008204	npm3	64	54.455	ENSFDAG00000016537	NPM3	95	53.000	Fukomys_damarensis
ENSIPUG00000008204	npm3	86	72.388	ENSFHEG00000003983	npm3	99	68.387	Fundulus_heteroclitus
ENSIPUG00000008204	npm3	88	72.143	ENSGMOG00000004317	npm3	92	72.143	Gadus_morhua
ENSIPUG00000008204	npm3	87	49.640	ENSGALG00000032329	NPM3	94	48.201	Gallus_gallus
ENSIPUG00000008204	npm3	82	71.875	ENSGAFG00000009135	npm3	99	66.875	Gambusia_affinis
ENSIPUG00000008204	npm3	98	65.663	ENSGACG00000007294	npm3	97	65.663	Gasterosteus_aculeatus
ENSIPUG00000008204	npm3	83	47.692	ENSGAGG00000004081	NPM3	75	47.692	Gopherus_agassizii
ENSIPUG00000008204	npm3	87	48.936	ENSGGOG00000027500	NPM3	79	51.064	Gorilla_gorilla
ENSIPUG00000008204	npm3	99	71.069	ENSHBUG00000023704	npm3	99	71.069	Haplochromis_burtoni
ENSIPUG00000008204	npm3	87	52.206	ENSHGLG00000019118	NPM3	64	55.556	Heterocephalus_glaber_female
ENSIPUG00000008204	npm3	82	53.488	ENSHGLG00100010926	NPM3	79	57.426	Heterocephalus_glaber_male
ENSIPUG00000008204	npm3	99	63.030	ENSHCOG00000019322	npm3	98	63.030	Hippocampus_comes
ENSIPUG00000008204	npm3	87	48.936	ENSSTOG00000022621	NPM3	80	48.936	Ictidomys_tridecemlineatus
ENSIPUG00000008204	npm3	69	55.556	ENSJJAG00000018907	Npm3	61	55.556	Jaculus_jaculus
ENSIPUG00000008204	npm3	100	64.118	ENSKMAG00000020800	npm3	100	64.706	Kryptolebias_marmoratus
ENSIPUG00000008204	npm3	99	70.000	ENSLBEG00000015651	npm3	98	71.519	Labrus_bergylta
ENSIPUG00000008204	npm3	99	71.338	ENSLOCG00000000705	-	99	71.338	Lepisosteus_oculatus
ENSIPUG00000008204	npm3	87	50.000	ENSLAFG00000023022	NPM3	77	48.148	Loxodonta_africana
ENSIPUG00000008204	npm3	87	48.936	ENSMFAG00000041878	NPM3	79	51.064	Macaca_fascicularis
ENSIPUG00000008204	npm3	87	48.936	ENSMMUG00000015774	NPM3	79	51.064	Macaca_mulatta
ENSIPUG00000008204	npm3	87	48.936	ENSMNEG00000039999	NPM3	79	51.064	Macaca_nemestrina
ENSIPUG00000008204	npm3	87	48.936	ENSMLEG00000038129	NPM3	79	51.064	Mandrillus_leucophaeus
ENSIPUG00000008204	npm3	99	71.429	ENSMAMG00000002698	npm3	99	68.944	Mastacembelus_armatus
ENSIPUG00000008204	npm3	99	72.500	ENSMZEG00005003091	npm3	99	72.500	Maylandia_zebra
ENSIPUG00000008204	npm3	71	54.545	ENSMAUG00000015218	Npm3	63	54.545	Mesocricetus_auratus
ENSIPUG00000008204	npm3	87	48.571	ENSMICG00000044119	NPM3	61	54.630	Microcebus_murinus
ENSIPUG00000008204	npm3	87	48.148	ENSMOCG00000013601	Npm3	78	48.148	Microtus_ochrogaster
ENSIPUG00000008204	npm3	99	69.375	ENSMMOG00000010681	npm3	99	69.375	Mola_mola
ENSIPUG00000008204	npm3	87	53.285	ENSMODG00000011689	NPM3	78	53.285	Monodelphis_domestica
ENSIPUG00000008204	npm3	99	65.680	ENSMALG00000016787	npm3	99	65.089	Monopterus_albus
ENSIPUG00000008204	npm3	72	51.786	MGP_CAROLIEiJ_G0023020	Npm3	63	52.727	Mus_caroli
ENSIPUG00000008204	npm3	72	50.893	ENSMUSG00000056209	Npm3	63	51.818	Mus_musculus
ENSIPUG00000008204	npm3	72	51.786	MGP_PahariEiJ_G0014510	Npm3	63	52.727	Mus_pahari
ENSIPUG00000008204	npm3	74	50.862	MGP_SPRETEiJ_G0023941	Npm3	77	46.667	Mus_spretus
ENSIPUG00000008204	npm3	69	54.630	ENSMPUG00000016894	NPM3	61	54.630	Mustela_putorius_furo
ENSIPUG00000008204	npm3	87	50.355	ENSMLUG00000004961	NPM3	80	51.064	Myotis_lucifugus
ENSIPUG00000008204	npm3	86	49.275	ENSNGAG00000022833	-	61	54.630	Nannospalax_galili
ENSIPUG00000008204	npm3	86	47.761	ENSNGAG00000000155	-	66	51.852	Nannospalax_galili
ENSIPUG00000008204	npm3	60	72.449	ENSNBRG00000009627	npm3	71	70.408	Neolamprologus_brichardi
ENSIPUG00000008204	npm3	87	48.936	ENSNLEG00000029281	-	79	51.064	Nomascus_leucogenys
ENSIPUG00000008204	npm3	87	46.809	ENSNLEG00000018637	-	79	48.936	Nomascus_leucogenys
ENSIPUG00000008204	npm3	62	47.423	ENSMEUG00000002619	-	100	46.465	Notamacropus_eugenii
ENSIPUG00000008204	npm3	68	57.547	ENSMEUG00000003465	-	77	57.547	Notamacropus_eugenii
ENSIPUG00000008204	npm3	63	46.465	ENSMEUG00000004931	-	100	46.465	Notamacropus_eugenii
ENSIPUG00000008204	npm3	87	47.857	ENSOPRG00000009229	NPM3	61	53.704	Ochotona_princeps
ENSIPUG00000008204	npm3	97	46.250	ENSODEG00000006704	NPM3	95	44.025	Octodon_degus
ENSIPUG00000008204	npm3	99	68.125	ENSONIG00000009513	npm3	98	71.875	Oreochromis_niloticus
ENSIPUG00000008204	npm3	87	48.571	ENSOCUG00000016819	NPM3	61	54.630	Oryctolagus_cuniculus
ENSIPUG00000008204	npm3	99	67.925	ENSORLG00000008492	npm3	100	67.925	Oryzias_latipes
ENSIPUG00000008204	npm3	99	67.925	ENSORLG00020002450	npm3	100	67.925	Oryzias_latipes_hni
ENSIPUG00000008204	npm3	99	67.925	ENSORLG00015006856	npm3	100	67.296	Oryzias_latipes_hsok
ENSIPUG00000008204	npm3	99	68.519	ENSOMEG00000002666	npm3	100	69.136	Oryzias_melastigma
ENSIPUG00000008204	npm3	87	48.227	ENSOGAG00000010001	NPM3	61	54.630	Otolemur_garnettii
ENSIPUG00000008204	npm3	97	44.785	ENSOARG00000016916	NPM3	76	48.120	Ovis_aries
ENSIPUG00000008204	npm3	87	48.936	ENSPPAG00000040517	NPM3	79	51.064	Pan_paniscus
ENSIPUG00000008204	npm3	87	47.857	ENSPPRG00000012611	-	61	53.704	Panthera_pardus
ENSIPUG00000008204	npm3	87	47.857	ENSPTIG00000005390	NPM3	61	53.704	Panthera_tigris_altaica
ENSIPUG00000008204	npm3	87	48.936	ENSPTRG00000002875	NPM3	79	51.064	Pan_troglodytes
ENSIPUG00000008204	npm3	87	48.936	ENSPANG00000021046	NPM3	79	51.064	Papio_anubis
ENSIPUG00000008204	npm3	92	64.583	ENSPKIG00000007609	npm3	75	64.583	Paramormyrops_kingsleyae
ENSIPUG00000008204	npm3	100	61.585	ENSPMGG00000020204	npm3	100	63.030	Periophthalmus_magnuspinnatus
ENSIPUG00000008204	npm3	72	52.679	ENSPEMG00000007731	Npm3	63	53.636	Peromyscus_maniculatus_bairdii
ENSIPUG00000008204	npm3	82	75.000	ENSPFOG00000014692	npm3	99	68.944	Poecilia_formosa
ENSIPUG00000008204	npm3	82	75.000	ENSPLAG00000009956	npm3	99	68.944	Poecilia_latipinna
ENSIPUG00000008204	npm3	67	82.692	ENSPMEG00000011795	npm3	91	72.593	Poecilia_mexicana
ENSIPUG00000008204	npm3	82	74.219	ENSPREG00000020765	npm3	99	68.944	Poecilia_reticulata
ENSIPUG00000008204	npm3	87	48.252	ENSPPYG00000002589	NPM3	69	50.350	Pongo_abelii
ENSIPUG00000008204	npm3	87	48.571	ENSPCOG00000014704	NPM3	61	54.630	Propithecus_coquereli
ENSIPUG00000008204	npm3	87	47.857	ENSPVAG00000004038	NPM3	61	54.630	Pteropus_vampyrus
ENSIPUG00000008204	npm3	99	71.875	ENSPNYG00000009300	npm3	99	71.875	Pundamilia_nyererei
ENSIPUG00000008204	npm3	100	87.261	ENSPNAG00000014779	npm3	100	87.261	Pygocentrus_nattereri
ENSIPUG00000008204	npm3	87	50.365	ENSRNOG00000017622	Npm3	78	47.407	Rattus_norvegicus
ENSIPUG00000008204	npm3	95	48.701	ENSRBIG00000042048	-	77	51.639	Rhinopithecus_bieti
ENSIPUG00000008204	npm3	98	46.061	ENSRBIG00000039086	-	61	54.630	Rhinopithecus_bieti
ENSIPUG00000008204	npm3	98	46.061	ENSRROG00000029912	NPM3	61	54.630	Rhinopithecus_roxellana
ENSIPUG00000008204	npm3	72	52.679	ENSSBOG00000027661	NPM3	64	54.630	Saimiri_boliviensis_boliviensis
ENSIPUG00000008204	npm3	87	50.000	ENSSHAG00000008567	NPM3	78	47.794	Sarcophilus_harrisii
ENSIPUG00000008204	npm3	100	69.811	ENSSFOG00015013651	npm3	100	69.811	Scleropages_formosus
ENSIPUG00000008204	npm3	99	70.886	ENSSMAG00000003907	npm3	99	70.886	Scophthalmus_maximus
ENSIPUG00000008204	npm3	99	73.913	ENSSDUG00000022843	npm3	99	73.913	Seriola_dumerili
ENSIPUG00000008204	npm3	99	72.671	ENSSLDG00000002811	npm3	99	72.671	Seriola_lalandi_dorsalis
ENSIPUG00000008204	npm3	96	45.912	ENSSPUG00000011875	NPM3	99	45.912	Sphenodon_punctatus
ENSIPUG00000008204	npm3	99	70.807	ENSSPAG00000002553	npm3	99	70.807	Stegastes_partitus
ENSIPUG00000008204	npm3	98	43.293	ENSSSCG00000010568	NPM3	93	43.293	Sus_scrofa
ENSIPUG00000008204	npm3	71	49.550	ENSTGUG00000009948	NPM3	79	51.923	Taeniopygia_guttata
ENSIPUG00000008204	npm3	98	75.000	ENSTRUG00000011661	npm3	99	73.718	Takifugu_rubripes
ENSIPUG00000008204	npm3	84	74.046	ENSTNIG00000016518	npm3	72	76.800	Tetraodon_nigroviridis
ENSIPUG00000008204	npm3	87	48.201	ENSVPAG00000003120	NPM3	76	48.120	Vicugna_pacos
ENSIPUG00000008204	npm3	87	49.640	ENSVVUG00000000945	NPM3	53	54.630	Vulpes_vulpes
ENSIPUG00000008204	npm3	88	49.333	ENSXETG00000014472	npm3	88	49.333	Xenopus_tropicalis
ENSIPUG00000008204	npm3	86	72.388	ENSXCOG00000012121	npm3	98	66.463	Xiphophorus_couchianus
ENSIPUG00000008204	npm3	86	72.388	ENSXMAG00000013473	npm3	98	66.463	Xiphophorus_maculatus