EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000008261 (Gene tree)
Gene ID: 108268384
Gene Symbol: emg1
Alias: zgc:136360
Full Name: EMG1%2C N1-specific pseudouridine methyltransferase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3858 bases
Position: chr1:16188563-16192420
Accession: 108268384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000012146	EMG1	PF03587.14	5.9e-80	1	1
ENSIPUP00000012158	EMG1	PF03587.14	5.3e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000012666	-	813	-	ENSIPUP00000012158	270 (aa)	-	-
ENSIPUT00000012653	-	2171	XM_017473285	ENSIPUP00000012146	238 (aa)	XP_017328774	A0A2D0RE08

Gene Model

Click here to download ENSIPUG00000008261's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008261's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008261	emg1	97	69.099	ENSG00000126749	EMG1	95	71.528	Homo_sapiens
ENSIPUG00000008261	emg1	98	83.333	ENSAPOG00000023213	emg1	99	83.333	Acanthochromis_polyacanthus
ENSIPUG00000008261	emg1	100	67.623	ENSAMEG00000013753	EMG1	100	67.623	Ailuropoda_melanoleuca
ENSIPUG00000008261	emg1	100	86.134	ENSACIG00000011786	emg1	100	86.134	Amphilophus_citrinellus
ENSIPUG00000008261	emg1	98	84.615	ENSAOCG00000006520	emg1	95	84.615	Amphiprion_ocellaris
ENSIPUG00000008261	emg1	98	84.615	ENSAPEG00000011094	emg1	95	84.615	Amphiprion_percula
ENSIPUG00000008261	emg1	100	85.714	ENSATEG00000021642	emg1	100	85.714	Anabas_testudineus
ENSIPUG00000008261	emg1	79	74.603	ENSAPLG00000005308	EMG1	100	74.603	Anas_platyrhynchos
ENSIPUG00000008261	emg1	85	74.877	ENSACAG00000007210	EMG1	89	74.877	Anolis_carolinensis
ENSIPUG00000008261	emg1	97	63.519	ENSANAG00000029536	-	95	63.519	Aotus_nancymaae
ENSIPUG00000008261	emg1	97	68.803	ENSANAG00000022855	-	96	68.803	Aotus_nancymaae
ENSIPUG00000008261	emg1	100	85.294	ENSACLG00000023688	emg1	100	85.294	Astatotilapia_calliptera
ENSIPUG00000008261	emg1	100	87.395	ENSAMXG00000018994	emg1	100	87.395	Astyanax_mexicanus
ENSIPUG00000008261	emg1	100	66.393	ENSBTAG00000013126	EMG1	70	66.393	Bos_taurus
ENSIPUG00000008261	emg1	92	52.489	WBGene00012652	Y39A1A.14	94	52.489	Caenorhabditis_elegans
ENSIPUG00000008261	emg1	100	67.623	ENSCJAG00000007120	EMG1	100	67.623	Callithrix_jacchus
ENSIPUG00000008261	emg1	100	67.623	ENSCAFG00000014424	EMG1	100	67.623	Canis_familiaris
ENSIPUG00000008261	emg1	100	67.623	ENSCAFG00020003127	EMG1	100	67.623	Canis_lupus_dingo
ENSIPUG00000008261	emg1	100	66.803	ENSCHIG00000003188	EMG1	100	66.803	Capra_hircus
ENSIPUG00000008261	emg1	63	72.185	ENSTSYG00000035847	EMG1	100	72.185	Carlito_syrichta
ENSIPUG00000008261	emg1	63	73.510	ENSCAPG00000011212	EMG1	100	73.510	Cavia_aperea
ENSIPUG00000008261	emg1	100	66.393	ENSCPOG00000025388	EMG1	100	66.393	Cavia_porcellus
ENSIPUG00000008261	emg1	63	53.289	ENSCCAG00000024274	-	100	53.289	Cebus_capucinus
ENSIPUG00000008261	emg1	100	67.623	ENSCCAG00000033309	-	100	67.623	Cebus_capucinus
ENSIPUG00000008261	emg1	61	58.219	ENSCCAG00000034889	-	85	58.219	Cebus_capucinus
ENSIPUG00000008261	emg1	100	67.623	ENSCATG00000016750	EMG1	100	67.623	Cercocebus_atys
ENSIPUG00000008261	emg1	100	65.984	ENSCLAG00000015067	EMG1	100	65.984	Chinchilla_lanigera
ENSIPUG00000008261	emg1	100	67.623	ENSCSAG00000010140	EMG1	100	67.623	Chlorocebus_sabaeus
ENSIPUG00000008261	emg1	100	68.033	ENSCHOG00000002886	EMG1	100	68.033	Choloepus_hoffmanni
ENSIPUG00000008261	emg1	71	73.964	ENSCPBG00000005167	EMG1	58	74.251	Chrysemys_picta_bellii
ENSIPUG00000008261	emg1	97	66.524	ENSCING00000022202	-	98	66.524	Ciona_intestinalis
ENSIPUG00000008261	emg1	97	65.948	ENSCSAVG00000005612	-	98	65.948	Ciona_savignyi
ENSIPUG00000008261	emg1	100	67.623	ENSCANG00000043101	-	100	67.623	Colobus_angolensis_palliatus
ENSIPUG00000008261	emg1	95	61.842	ENSCANG00000042498	-	100	68.571	Colobus_angolensis_palliatus
ENSIPUG00000008261	emg1	85	75.862	ENSCGRG00001018228	Emg1	83	75.862	Cricetulus_griseus_chok1gshd
ENSIPUG00000008261	emg1	85	75.862	ENSCGRG00000018238	Emg1	83	75.862	Cricetulus_griseus_crigri
ENSIPUG00000008261	emg1	100	83.402	ENSCSEG00000020136	emg1	100	83.402	Cynoglossus_semilaevis
ENSIPUG00000008261	emg1	98	82.979	ENSCVAG00000001164	emg1	99	82.979	Cyprinodon_variegatus
ENSIPUG00000008261	emg1	100	86.555	ENSDARG00000056914	emg1	100	86.555	Danio_rerio
ENSIPUG00000008261	emg1	94	71.556	ENSDNOG00000005533	EMG1	100	67.623	Dasypus_novemcinctus
ENSIPUG00000008261	emg1	80	75.789	ENSDORG00000009795	Emg1	81	75.789	Dipodomys_ordii
ENSIPUG00000008261	emg1	91	64.286	FBgn0029714	CG3527	89	64.286	Drosophila_melanogaster
ENSIPUG00000008261	emg1	64	50.658	ENSETEG00000009111	-	99	50.658	Echinops_telfairi
ENSIPUG00000008261	emg1	86	72.195	ENSEBUG00000008287	emg1	80	72.195	Eptatretus_burgeri
ENSIPUG00000008261	emg1	100	66.803	ENSEASG00005016018	EMG1	100	66.803	Equus_asinus_asinus
ENSIPUG00000008261	emg1	100	67.213	ENSECAG00000022412	EMG1	100	67.213	Equus_caballus
ENSIPUG00000008261	emg1	100	66.393	ENSEEUG00000000065	EMG1	100	66.393	Erinaceus_europaeus
ENSIPUG00000008261	emg1	100	68.033	ENSFCAG00000004288	EMG1	100	68.033	Felis_catus
ENSIPUG00000008261	emg1	89	74.419	ENSFALG00000004617	EMG1	95	71.681	Ficedula_albicollis
ENSIPUG00000008261	emg1	100	67.213	ENSFDAG00000011086	EMG1	100	67.213	Fukomys_damarensis
ENSIPUG00000008261	emg1	54	83.846	ENSFHEG00000014379	emg1	59	83.846	Fundulus_heteroclitus
ENSIPUG00000008261	emg1	58	68.116	ENSFHEG00000014307	emg1	82	68.116	Fundulus_heteroclitus
ENSIPUG00000008261	emg1	100	83.613	ENSGMOG00000011025	emg1	98	83.613	Gadus_morhua
ENSIPUG00000008261	emg1	97	70.259	ENSGALG00000014568	EMG1	97	70.259	Gallus_gallus
ENSIPUG00000008261	emg1	98	82.553	ENSGAFG00000014143	emg1	99	82.553	Gambusia_affinis
ENSIPUG00000008261	emg1	100	83.264	ENSGACG00000010330	emg1	98	83.264	Gasterosteus_aculeatus
ENSIPUG00000008261	emg1	79	74.074	ENSGAGG00000005641	EMG1	100	72.848	Gopherus_agassizii
ENSIPUG00000008261	emg1	97	68.670	ENSGGOG00000004287	EMG1	95	68.670	Gorilla_gorilla
ENSIPUG00000008261	emg1	100	85.294	ENSHBUG00000014862	emg1	100	85.294	Haplochromis_burtoni
ENSIPUG00000008261	emg1	98	68.803	ENSHGLG00000001300	EMG1	94	68.803	Heterocephalus_glaber_female
ENSIPUG00000008261	emg1	98	68.803	ENSHGLG00100011644	EMG1	94	68.803	Heterocephalus_glaber_male
ENSIPUG00000008261	emg1	100	85.294	ENSHCOG00000017870	emg1	100	85.294	Hippocampus_comes
ENSIPUG00000008261	emg1	97	69.099	ENSSTOG00000000387	EMG1	95	69.099	Ictidomys_tridecemlineatus
ENSIPUG00000008261	emg1	95	69.737	ENSJJAG00000018448	Emg1	93	69.737	Jaculus_jaculus
ENSIPUG00000008261	emg1	100	83.264	ENSKMAG00000007069	emg1	100	83.264	Kryptolebias_marmoratus
ENSIPUG00000008261	emg1	100	85.294	ENSLBEG00000007424	emg1	100	85.294	Labrus_bergylta
ENSIPUG00000008261	emg1	100	79.498	ENSLOCG00000008451	emg1	98	79.498	Lepisosteus_oculatus
ENSIPUG00000008261	emg1	97	69.957	ENSLAFG00000001314	EMG1	95	69.957	Loxodonta_africana
ENSIPUG00000008261	emg1	100	67.623	ENSMFAG00000037142	EMG1	100	67.623	Macaca_fascicularis
ENSIPUG00000008261	emg1	100	67.623	ENSMMUG00000010207	EMG1	100	67.623	Macaca_mulatta
ENSIPUG00000008261	emg1	100	67.623	ENSMNEG00000040907	EMG1	100	67.623	Macaca_nemestrina
ENSIPUG00000008261	emg1	100	67.623	ENSMLEG00000026029	EMG1	100	67.623	Mandrillus_leucophaeus
ENSIPUG00000008261	emg1	100	85.714	ENSMAMG00000001888	emg1	100	85.714	Mastacembelus_armatus
ENSIPUG00000008261	emg1	100	85.294	ENSMZEG00005017546	emg1	100	85.294	Maylandia_zebra
ENSIPUG00000008261	emg1	86	76.585	ENSMGAG00000014145	EMG1	85	76.585	Meleagris_gallopavo
ENSIPUG00000008261	emg1	100	67.213	ENSMAUG00000011093	Emg1	100	67.213	Mesocricetus_auratus
ENSIPUG00000008261	emg1	100	67.623	ENSMICG00000001790	EMG1	100	67.623	Microcebus_murinus
ENSIPUG00000008261	emg1	100	67.213	ENSMOCG00000022570	Emg1	100	67.213	Microtus_ochrogaster
ENSIPUG00000008261	emg1	100	84.874	ENSMMOG00000016090	emg1	100	84.874	Mola_mola
ENSIPUG00000008261	emg1	94	70.982	ENSMODG00000018161	EMG1	94	69.528	Monodelphis_domestica
ENSIPUG00000008261	emg1	100	83.613	ENSMALG00000022477	emg1	100	83.613	Monopterus_albus
ENSIPUG00000008261	emg1	100	67.213	MGP_CAROLIEiJ_G0028844	Emg1	100	67.213	Mus_caroli
ENSIPUG00000008261	emg1	85	76.355	ENSMUSG00000004268	Emg1	83	76.355	Mus_musculus
ENSIPUG00000008261	emg1	100	68.033	MGP_PahariEiJ_G0022605	Emg1	100	68.033	Mus_pahari
ENSIPUG00000008261	emg1	100	67.623	MGP_SPRETEiJ_G0029886	Emg1	100	67.623	Mus_spretus
ENSIPUG00000008261	emg1	100	68.033	ENSMPUG00000016763	EMG1	100	68.033	Mustela_putorius_furo
ENSIPUG00000008261	emg1	100	65.854	ENSMLUG00000009196	EMG1	100	65.854	Myotis_lucifugus
ENSIPUG00000008261	emg1	100	67.500	ENSNGAG00000022592	Emg1	100	67.500	Nannospalax_galili
ENSIPUG00000008261	emg1	100	85.294	ENSNBRG00000001192	emg1	100	85.294	Neolamprologus_brichardi
ENSIPUG00000008261	emg1	100	67.623	ENSNLEG00000005080	EMG1	100	67.623	Nomascus_leucogenys
ENSIPUG00000008261	emg1	92	67.273	ENSMEUG00000000831	EMG1	97	67.273	Notamacropus_eugenii
ENSIPUG00000008261	emg1	59	72.857	ENSOPRG00000004071	-	89	72.857	Ochotona_princeps
ENSIPUG00000008261	emg1	79	74.468	ENSOPRG00000016878	-	100	74.468	Ochotona_princeps
ENSIPUG00000008261	emg1	100	65.854	ENSODEG00000004059	EMG1	100	65.854	Octodon_degus
ENSIPUG00000008261	emg1	100	85.294	ENSONIG00000012893	emg1	99	85.294	Oreochromis_niloticus
ENSIPUG00000008261	emg1	100	66.393	ENSOCUG00000003603	EMG1	100	66.393	Oryctolagus_cuniculus
ENSIPUG00000008261	emg1	100	85.294	ENSORLG00000012146	emg1	97	85.294	Oryzias_latipes
ENSIPUG00000008261	emg1	100	85.294	ENSORLG00020005499	emg1	100	85.294	Oryzias_latipes_hni
ENSIPUG00000008261	emg1	100	85.294	ENSORLG00015011535	emg1	100	85.294	Oryzias_latipes_hsok
ENSIPUG00000008261	emg1	100	84.034	ENSOMEG00000012687	emg1	100	84.034	Oryzias_melastigma
ENSIPUG00000008261	emg1	94	70.089	ENSOGAG00000006975	EMG1	92	70.089	Otolemur_garnettii
ENSIPUG00000008261	emg1	100	66.260	ENSOARG00000004923	EMG1	100	66.260	Ovis_aries
ENSIPUG00000008261	emg1	100	68.033	ENSPPAG00000033046	EMG1	100	68.033	Pan_paniscus
ENSIPUG00000008261	emg1	100	67.623	ENSPPRG00000012350	EMG1	100	67.623	Panthera_pardus
ENSIPUG00000008261	emg1	100	67.623	ENSPTIG00000000358	EMG1	100	67.623	Panthera_tigris_altaica
ENSIPUG00000008261	emg1	100	68.033	ENSPTRG00000048050	EMG1	100	68.033	Pan_troglodytes
ENSIPUG00000008261	emg1	100	68.033	ENSPANG00000019398	-	100	68.033	Papio_anubis
ENSIPUG00000008261	emg1	100	67.623	ENSPANG00000005523	-	100	67.623	Papio_anubis
ENSIPUG00000008261	emg1	100	85.774	ENSPKIG00000025303	emg1	100	85.774	Paramormyrops_kingsleyae
ENSIPUG00000008261	emg1	100	67.782	ENSPSIG00000011094	EMG1	100	67.782	Pelodiscus_sinensis
ENSIPUG00000008261	emg1	99	84.746	ENSPMGG00000019918	emg1	99	84.746	Periophthalmus_magnuspinnatus
ENSIPUG00000008261	emg1	100	67.213	ENSPEMG00000010244	Emg1	100	67.213	Peromyscus_maniculatus_bairdii
ENSIPUG00000008261	emg1	94	72.000	ENSPCIG00000002814	EMG1	91	72.000	Phascolarctos_cinereus
ENSIPUG00000008261	emg1	98	82.979	ENSPFOG00000013034	emg1	99	82.979	Poecilia_formosa
ENSIPUG00000008261	emg1	98	82.979	ENSPLAG00000000125	emg1	99	82.979	Poecilia_latipinna
ENSIPUG00000008261	emg1	98	83.404	ENSPMEG00000016802	emg1	99	83.404	Poecilia_mexicana
ENSIPUG00000008261	emg1	99	81.933	ENSPREG00000010409	emg1	82	81.933	Poecilia_reticulata
ENSIPUG00000008261	emg1	100	68.033	ENSPPYG00000004215	EMG1	100	68.033	Pongo_abelii
ENSIPUG00000008261	emg1	95	58.772	ENSPCAG00000012368	EMG1	92	58.772	Procavia_capensis
ENSIPUG00000008261	emg1	100	67.213	ENSPCOG00000028560	EMG1	100	67.213	Propithecus_coquereli
ENSIPUG00000008261	emg1	100	66.803	ENSPVAG00000006030	EMG1	100	66.803	Pteropus_vampyrus
ENSIPUG00000008261	emg1	100	85.294	ENSPNYG00000023172	emg1	100	85.294	Pundamilia_nyererei
ENSIPUG00000008261	emg1	100	88.655	ENSPNAG00000019953	emg1	100	88.655	Pygocentrus_nattereri
ENSIPUG00000008261	emg1	100	68.033	ENSRNOG00000012828	Emg1	100	68.033	Rattus_norvegicus
ENSIPUG00000008261	emg1	100	68.033	ENSRBIG00000031315	EMG1	100	68.033	Rhinopithecus_bieti
ENSIPUG00000008261	emg1	100	68.033	ENSRROG00000032961	EMG1	100	68.033	Rhinopithecus_roxellana
ENSIPUG00000008261	emg1	87	48.848	YLR186W	EMG1	86	48.848	Saccharomyces_cerevisiae
ENSIPUG00000008261	emg1	100	68.033	ENSSBOG00000029143	-	100	68.033	Saimiri_boliviensis_boliviensis
ENSIPUG00000008261	emg1	97	51.073	ENSSBOG00000022895	-	96	51.073	Saimiri_boliviensis_boliviensis
ENSIPUG00000008261	emg1	94	70.982	ENSSHAG00000016428	EMG1	95	69.528	Sarcophilus_harrisii
ENSIPUG00000008261	emg1	100	83.682	ENSSFOG00015002421	emg1	100	83.682	Scleropages_formosus
ENSIPUG00000008261	emg1	100	83.613	ENSSMAG00000011806	emg1	100	83.613	Scophthalmus_maximus
ENSIPUG00000008261	emg1	100	84.454	ENSSDUG00000011345	emg1	95	84.454	Seriola_dumerili
ENSIPUG00000008261	emg1	100	84.454	ENSSLDG00000023439	emg1	95	84.454	Seriola_lalandi_dorsalis
ENSIPUG00000008261	emg1	97	57.082	ENSSARG00000002227	EMG1	95	57.082	Sorex_araneus
ENSIPUG00000008261	emg1	100	65.966	ENSSPUG00000014446	EMG1	100	65.966	Sphenodon_punctatus
ENSIPUG00000008261	emg1	98	84.979	ENSSPAG00000005460	emg1	99	84.979	Stegastes_partitus
ENSIPUG00000008261	emg1	100	66.803	ENSSSCG00000026812	EMG1	100	66.803	Sus_scrofa
ENSIPUG00000008261	emg1	86	76.585	ENSTGUG00000013271	EMG1	99	76.585	Taeniopygia_guttata
ENSIPUG00000008261	emg1	100	84.874	ENSTRUG00000001906	emg1	100	84.874	Takifugu_rubripes
ENSIPUG00000008261	emg1	100	85.294	ENSTNIG00000008047	emg1	98	85.294	Tetraodon_nigroviridis
ENSIPUG00000008261	emg1	85	75.862	ENSTBEG00000015406	EMG1	97	75.862	Tupaia_belangeri
ENSIPUG00000008261	emg1	100	54.918	ENSTTRG00000004810	EMG1	100	54.918	Tursiops_truncatus
ENSIPUG00000008261	emg1	100	67.623	ENSUAMG00000026959	EMG1	100	67.623	Ursus_americanus
ENSIPUG00000008261	emg1	100	67.623	ENSUMAG00000003248	EMG1	100	67.623	Ursus_maritimus
ENSIPUG00000008261	emg1	94	71.111	ENSVVUG00000010807	EMG1	100	67.623	Vulpes_vulpes
ENSIPUG00000008261	emg1	86	75.000	ENSXETG00000023917	emg1	99	75.000	Xenopus_tropicalis
ENSIPUG00000008261	emg1	98	81.702	ENSXMAG00000011508	emg1	99	81.702	Xiphophorus_maculatus