EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000008359 (Gene tree)
Gene ID: 108263924
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5285 bases
Position: chr4:28121117-28126401
Accession: 108263924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000012278	tRNA_int_endo	PF01974.17	4.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000012794	-	2196	XM_017465148	ENSIPUP00000012278	321 (aa)	XP_017320637	A0A2D0QQF1

Gene Model

Click here to download ENSIPUG00000008359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008359's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008359	tsen34	85	37.143	ENSG00000170892	TSEN34	96	37.143	Homo_sapiens
ENSIPUG00000008359	tsen34	83	53.480	ENSAPOG00000012557	-	90	53.480	Acanthochromis_polyacanthus
ENSIPUG00000008359	tsen34	88	48.084	ENSAPOG00000008579	-	94	54.887	Acanthochromis_polyacanthus
ENSIPUG00000008359	tsen34	88	54.296	ENSAPOG00000001248	tsen34	95	54.296	Acanthochromis_polyacanthus
ENSIPUG00000008359	tsen34	77	38.163	ENSAMEG00000004585	TSEN34	99	38.163	Ailuropoda_melanoleuca
ENSIPUG00000008359	tsen34	91	50.680	ENSACIG00000007110	tsen34	91	50.680	Amphilophus_citrinellus
ENSIPUG00000008359	tsen34	91	51.864	ENSAOCG00000006905	tsen34	98	51.864	Amphiprion_ocellaris
ENSIPUG00000008359	tsen34	91	51.864	ENSAPEG00000019171	tsen34	98	51.864	Amphiprion_percula
ENSIPUG00000008359	tsen34	88	51.568	ENSATEG00000019800	tsen34	96	51.568	Anabas_testudineus
ENSIPUG00000008359	tsen34	88	38.245	ENSACAG00000016189	TSEN34	99	38.871	Anolis_carolinensis
ENSIPUG00000008359	tsen34	85	38.235	ENSANAG00000026113	TSEN34	96	38.095	Aotus_nancymaae
ENSIPUG00000008359	tsen34	93	50.671	ENSACLG00000009661	tsen34	96	50.508	Astatotilapia_calliptera
ENSIPUG00000008359	tsen34	91	72.945	ENSAMXG00000017568	tsen34	94	70.820	Astyanax_mexicanus
ENSIPUG00000008359	tsen34	85	36.893	ENSBTAG00000006486	TSEN34	96	36.893	Bos_taurus
ENSIPUG00000008359	tsen34	85	38.591	ENSCJAG00000001128	TSEN34	96	39.535	Callithrix_jacchus
ENSIPUG00000008359	tsen34	85	37.419	ENSCAFG00000002675	TSEN34	96	37.742	Canis_familiaris
ENSIPUG00000008359	tsen34	85	37.013	ENSCAFG00020018350	TSEN34	96	37.338	Canis_lupus_dingo
ENSIPUG00000008359	tsen34	85	36.634	ENSCHIG00000020705	TSEN34	96	36.634	Capra_hircus
ENSIPUG00000008359	tsen34	80	38.699	ENSTSYG00000028200	TSEN34	93	37.075	Carlito_syrichta
ENSIPUG00000008359	tsen34	85	38.591	ENSCPOG00000012672	TSEN34	96	38.591	Cavia_porcellus
ENSIPUG00000008359	tsen34	85	38.095	ENSCCAG00000036023	TSEN34	96	38.944	Cebus_capucinus
ENSIPUG00000008359	tsen34	82	37.333	ENSCATG00000033390	TSEN34	95	37.333	Cercocebus_atys
ENSIPUG00000008359	tsen34	85	39.203	ENSCLAG00000000618	TSEN34	96	39.203	Chinchilla_lanigera
ENSIPUG00000008359	tsen34	85	37.662	ENSCSAG00000001891	TSEN34	96	37.662	Chlorocebus_sabaeus
ENSIPUG00000008359	tsen34	85	38.312	ENSCANG00000040984	TSEN34	96	38.312	Colobus_angolensis_palliatus
ENSIPUG00000008359	tsen34	85	38.339	ENSCGRG00001006296	Tsen34	96	38.339	Cricetulus_griseus_chok1gshd
ENSIPUG00000008359	tsen34	99	49.231	ENSCSEG00000006278	tsen34	99	51.385	Cynoglossus_semilaevis
ENSIPUG00000008359	tsen34	93	62.458	ENSDARG00000061370	tsen34	94	62.458	Danio_rerio
ENSIPUG00000008359	tsen34	85	36.774	ENSDNOG00000039332	TSEN34	96	36.774	Dasypus_novemcinctus
ENSIPUG00000008359	tsen34	85	38.710	ENSDORG00000029071	Tsen34	96	38.710	Dipodomys_ordii
ENSIPUG00000008359	tsen34	85	37.097	ENSEASG00005021580	TSEN34	96	37.097	Equus_asinus_asinus
ENSIPUG00000008359	tsen34	90	35.583	ENSECAG00000019651	TSEN34	88	35.583	Equus_caballus
ENSIPUG00000008359	tsen34	92	60.269	ENSELUG00000006262	tsen34	96	60.269	Esox_lucius
ENSIPUG00000008359	tsen34	85	37.338	ENSFCAG00000014045	TSEN34	96	37.338	Felis_catus
ENSIPUG00000008359	tsen34	91	51.361	ENSFHEG00000008791	tsen34	95	51.361	Fundulus_heteroclitus
ENSIPUG00000008359	tsen34	62	53.500	ENSGMOG00000001961	tsen34	93	53.500	Gadus_morhua
ENSIPUG00000008359	tsen34	93	52.492	ENSGAFG00000016880	tsen34	100	52.492	Gambusia_affinis
ENSIPUG00000008359	tsen34	88	47.403	ENSGACG00000004800	tsen34	100	47.403	Gasterosteus_aculeatus
ENSIPUG00000008359	tsen34	88	42.759	ENSGAGG00000008982	TSEN34	72	42.759	Gopherus_agassizii
ENSIPUG00000008359	tsen34	85	37.419	ENSGGOG00000008197	TSEN34	96	37.419	Gorilla_gorilla
ENSIPUG00000008359	tsen34	95	50.000	ENSHBUG00000016593	tsen34	89	50.000	Haplochromis_burtoni
ENSIPUG00000008359	tsen34	85	38.487	ENSHGLG00000017619	TSEN34	96	38.487	Heterocephalus_glaber_female
ENSIPUG00000008359	tsen34	92	48.311	ENSHCOG00000001368	tsen34	99	47.973	Hippocampus_comes
ENSIPUG00000008359	tsen34	85	37.255	ENSSTOG00000023816	TSEN34	96	37.338	Ictidomys_tridecemlineatus
ENSIPUG00000008359	tsen34	85	37.500	ENSJJAG00000016301	Tsen34	96	37.500	Jaculus_jaculus
ENSIPUG00000008359	tsen34	88	51.049	ENSKMAG00000007181	tsen34	98	47.516	Kryptolebias_marmoratus
ENSIPUG00000008359	tsen34	91	52.365	ENSLBEG00000015001	tsen34	98	52.365	Labrus_bergylta
ENSIPUG00000008359	tsen34	62	39.095	ENSLACG00000013346	-	99	39.095	Latimeria_chalumnae
ENSIPUG00000008359	tsen34	88	61.484	ENSLOCG00000001887	tsen34	97	61.484	Lepisosteus_oculatus
ENSIPUG00000008359	tsen34	85	36.624	ENSLAFG00000015215	TSEN34	96	36.943	Loxodonta_africana
ENSIPUG00000008359	tsen34	85	37.662	ENSMFAG00000044825	TSEN34	96	37.662	Macaca_fascicularis
ENSIPUG00000008359	tsen34	85	37.662	ENSMMUG00000016571	TSEN34	96	37.662	Macaca_mulatta
ENSIPUG00000008359	tsen34	85	37.662	ENSMNEG00000045457	TSEN34	96	37.662	Macaca_nemestrina
ENSIPUG00000008359	tsen34	85	31.769	ENSMLEG00000034295	TSEN34	97	31.769	Mandrillus_leucophaeus
ENSIPUG00000008359	tsen34	96	50.804	ENSMAMG00000018407	tsen34	99	52.189	Mastacembelus_armatus
ENSIPUG00000008359	tsen34	95	50.329	ENSMZEG00005002313	tsen34	99	50.329	Maylandia_zebra
ENSIPUG00000008359	tsen34	64	33.884	ENSMAUG00000019716	Tsen34	77	35.102	Mesocricetus_auratus
ENSIPUG00000008359	tsen34	85	37.143	ENSMICG00000002409	TSEN34	96	37.143	Microcebus_murinus
ENSIPUG00000008359	tsen34	85	36.306	ENSMOCG00000022190	Tsen34	96	37.224	Microtus_ochrogaster
ENSIPUG00000008359	tsen34	89	48.065	ENSMMOG00000009551	tsen34	92	51.737	Mola_mola
ENSIPUG00000008359	tsen34	85	39.739	ENSMODG00000003984	-	74	41.368	Monodelphis_domestica
ENSIPUG00000008359	tsen34	94	47.078	ENSMALG00000018918	tsen34	99	51.645	Monopterus_albus
ENSIPUG00000008359	tsen34	85	37.742	MGP_CAROLIEiJ_G0029099	Tsen34	96	37.742	Mus_caroli
ENSIPUG00000008359	tsen34	85	37.299	ENSMUSG00000035585	Tsen34	96	37.299	Mus_musculus
ENSIPUG00000008359	tsen34	85	36.859	MGP_PahariEiJ_G0020968	Tsen34	96	36.859	Mus_pahari
ENSIPUG00000008359	tsen34	85	37.621	MGP_SPRETEiJ_G0030152	Tsen34	96	37.621	Mus_spretus
ENSIPUG00000008359	tsen34	85	37.338	ENSMPUG00000010373	TSEN34	96	36.364	Mustela_putorius_furo
ENSIPUG00000008359	tsen34	85	37.864	ENSMLUG00000016894	TSEN34	96	37.864	Myotis_lucifugus
ENSIPUG00000008359	tsen34	64	34.979	ENSNGAG00000016187	Tsen34	89	34.979	Nannospalax_galili
ENSIPUG00000008359	tsen34	92	50.000	ENSNBRG00000008640	tsen34	98	52.128	Neolamprologus_brichardi
ENSIPUG00000008359	tsen34	85	37.864	ENSNLEG00000006309	TSEN34	96	37.864	Nomascus_leucogenys
ENSIPUG00000008359	tsen34	85	45.055	ENSMEUG00000002978	TSEN34	96	45.055	Notamacropus_eugenii
ENSIPUG00000008359	tsen34	85	38.095	ENSODEG00000000096	TSEN34	96	38.095	Octodon_degus
ENSIPUG00000008359	tsen34	88	52.465	ENSONIG00000017253	tsen34	99	52.465	Oreochromis_niloticus
ENSIPUG00000008359	tsen34	63	36.017	ENSOANG00000014747	-	97	36.522	Ornithorhynchus_anatinus
ENSIPUG00000008359	tsen34	92	51.678	ENSORLG00015012740	tsen34	99	51.678	Oryzias_latipes_hsok
ENSIPUG00000008359	tsen34	92	48.136	ENSOMEG00000016771	tsen34	98	50.502	Oryzias_melastigma
ENSIPUG00000008359	tsen34	85	38.312	ENSOGAG00000006966	TSEN34	96	38.312	Otolemur_garnettii
ENSIPUG00000008359	tsen34	71	34.340	ENSOARG00000002763	TSEN34	92	35.336	Ovis_aries
ENSIPUG00000008359	tsen34	85	37.460	ENSPPAG00000036935	TSEN34	96	37.460	Pan_paniscus
ENSIPUG00000008359	tsen34	85	37.338	ENSPPRG00000011779	TSEN34	96	37.338	Panthera_pardus
ENSIPUG00000008359	tsen34	85	37.143	ENSPTRG00000011448	TSEN34	96	37.143	Pan_troglodytes
ENSIPUG00000008359	tsen34	85	37.143	ENSPTRG00000044768	-	96	37.143	Pan_troglodytes
ENSIPUG00000008359	tsen34	85	37.662	ENSPANG00000012101	TSEN34	96	37.662	Papio_anubis
ENSIPUG00000008359	tsen34	88	59.507	ENSPKIG00000014674	tsen34	94	59.507	Paramormyrops_kingsleyae
ENSIPUG00000008359	tsen34	85	37.785	ENSPEMG00000014535	Tsen34	96	38.188	Peromyscus_maniculatus_bairdii
ENSIPUG00000008359	tsen34	93	52.159	ENSPFOG00000008679	tsen34	100	52.492	Poecilia_formosa
ENSIPUG00000008359	tsen34	93	52.824	ENSPLAG00000017309	tsen34	100	53.156	Poecilia_latipinna
ENSIPUG00000008359	tsen34	93	52.159	ENSPMEG00000005235	tsen34	100	52.492	Poecilia_mexicana
ENSIPUG00000008359	tsen34	91	53.220	ENSPREG00000021784	tsen34	97	53.220	Poecilia_reticulata
ENSIPUG00000008359	tsen34	93	35.484	ENSPPYG00000010376	TSEN34	99	35.484	Pongo_abelii
ENSIPUG00000008359	tsen34	85	37.013	ENSPCAG00000012359	TSEN34	96	37.013	Procavia_capensis
ENSIPUG00000008359	tsen34	85	37.143	ENSPCOG00000013843	TSEN34	96	37.143	Propithecus_coquereli
ENSIPUG00000008359	tsen34	85	38.235	ENSPVAG00000015570	TSEN34	96	38.235	Pteropus_vampyrus
ENSIPUG00000008359	tsen34	95	50.658	ENSPNYG00000024090	tsen34	78	50.658	Pundamilia_nyererei
ENSIPUG00000008359	tsen34	95	71.475	ENSPNAG00000028698	tsen34	94	71.475	Pygocentrus_nattereri
ENSIPUG00000008359	tsen34	85	37.621	ENSRNOG00000059572	Tsen34l1	96	37.621	Rattus_norvegicus
ENSIPUG00000008359	tsen34	85	37.621	ENSRNOG00000055179	Tsen34	96	37.621	Rattus_norvegicus
ENSIPUG00000008359	tsen34	85	37.662	ENSRBIG00000034430	TSEN34	96	37.662	Rhinopithecus_bieti
ENSIPUG00000008359	tsen34	85	37.662	ENSRROG00000024217	TSEN34	96	37.662	Rhinopithecus_roxellana
ENSIPUG00000008359	tsen34	80	37.931	ENSSBOG00000016017	TSEN34	95	37.793	Saimiri_boliviensis_boliviensis
ENSIPUG00000008359	tsen34	62	60.294	ENSSFOG00015017579	tsen34	82	60.294	Scleropages_formosus
ENSIPUG00000008359	tsen34	91	51.186	ENSSMAG00000005214	tsen34	99	51.186	Scophthalmus_maximus
ENSIPUG00000008359	tsen34	89	52.595	ENSSDUG00000005391	tsen34	95	52.203	Seriola_dumerili
ENSIPUG00000008359	tsen34	92	52.685	ENSSLDG00000006144	tsen34	92	52.685	Seriola_lalandi_dorsalis
ENSIPUG00000008359	tsen34	68	38.189	ENSSARG00000005857	TSEN34	67	38.189	Sorex_araneus
ENSIPUG00000008359	tsen34	88	41.554	ENSSPUG00000008447	TSEN34	99	41.554	Sphenodon_punctatus
ENSIPUG00000008359	tsen34	98	48.580	ENSSPAG00000010512	tsen34	98	50.166	Stegastes_partitus
ENSIPUG00000008359	tsen34	85	37.621	ENSSSCG00000003268	TSEN34	96	37.942	Sus_scrofa
ENSIPUG00000008359	tsen34	88	46.316	ENSTRUG00000000787	tsen34	89	47.038	Takifugu_rubripes
ENSIPUG00000008359	tsen34	88	50.968	ENSTNIG00000011201	tsen34	100	51.768	Tetraodon_nigroviridis
ENSIPUG00000008359	tsen34	88	47.525	ENSTNIG00000001937	-	100	51.645	Tetraodon_nigroviridis
ENSIPUG00000008359	tsen34	85	37.987	ENSTTRG00000006571	TSEN34	96	37.987	Tursiops_truncatus
ENSIPUG00000008359	tsen34	85	37.013	ENSUAMG00000008701	TSEN34	96	37.013	Ursus_americanus
ENSIPUG00000008359	tsen34	85	37.013	ENSVVUG00000008211	TSEN34	96	37.338	Vulpes_vulpes
ENSIPUG00000008359	tsen34	87	41.060	ENSXETG00000004597	tsen34	99	41.060	Xenopus_tropicalis
ENSIPUG00000008359	tsen34	93	52.824	ENSXMAG00000024266	tsen34	100	52.824	Xiphophorus_maculatus