EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000008657 (Gene tree)
Gene ID: 108267061
Gene Symbol: polr3c
Alias: zgc:56348
Full Name: RNA polymerase III subunit C
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 11522 bases
Position: chr1:11835209-11846730
Accession: 108267061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000012710	RNA_pol_Rpc82	PF05645.13	3.4e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000013245	-	3619	XM_017470978	ENSIPUP00000012710	546 (aa)	XP_017326467	A0A2D0R7A2

Gene Model

Click here to download ENSIPUG00000008657's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG
ipu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008657	polr3c	99	65.804	ENSG00000186141	POLR3C	99	65.018	Homo_sapiens
ENSIPUG00000008657	polr3c	99	76.514	ENSAPOG00000008722	polr3c	99	76.514	Acanthochromis_polyacanthus
ENSIPUG00000008657	polr3c	99	66.483	ENSAMEG00000017531	POLR3C	99	65.693	Ailuropoda_melanoleuca
ENSIPUG00000008657	polr3c	99	76.044	ENSACIG00000008064	polr3c	100	75.774	Amphilophus_citrinellus
ENSIPUG00000008657	polr3c	99	76.514	ENSAOCG00000011695	polr3c	99	76.545	Amphiprion_ocellaris
ENSIPUG00000008657	polr3c	99	77.248	ENSAPEG00000004426	polr3c	99	76.727	Amphiprion_percula
ENSIPUG00000008657	polr3c	99	77.798	ENSATEG00000023618	polr3c	92	77.798	Anabas_testudineus
ENSIPUG00000008657	polr3c	99	66.174	ENSANAG00000036434	POLR3C	99	65.385	Aotus_nancymaae
ENSIPUG00000008657	polr3c	99	75.818	ENSACLG00000019970	polr3c	99	75.818	Astatotilapia_calliptera
ENSIPUG00000008657	polr3c	99	83.670	ENSAMXG00000008273	polr3c	99	83.670	Astyanax_mexicanus
ENSIPUG00000008657	polr3c	99	66.667	ENSBTAG00000021637	POLR3C	99	65.934	Bos_taurus
ENSIPUG00000008657	polr3c	99	65.989	ENSCJAG00000002314	POLR3C	99	65.201	Callithrix_jacchus
ENSIPUG00000008657	polr3c	99	66.114	ENSCAFG00000011257	POLR3C	99	65.328	Canis_familiaris
ENSIPUG00000008657	polr3c	95	65.517	ENSCAFG00020020066	POLR3C	99	64.706	Canis_lupus_dingo
ENSIPUG00000008657	polr3c	99	66.483	ENSCHIG00000022431	POLR3C	99	65.751	Capra_hircus
ENSIPUG00000008657	polr3c	99	65.378	ENSTSYG00000002292	POLR3C	99	64.781	Carlito_syrichta
ENSIPUG00000008657	polr3c	95	50.860	ENSCAPG00000011559	POLR3C	100	50.287	Cavia_aperea
ENSIPUG00000008657	polr3c	99	64.835	ENSCPOG00000004654	POLR3C	99	64.286	Cavia_porcellus
ENSIPUG00000008657	polr3c	99	66.174	ENSCCAG00000027077	POLR3C	99	65.201	Cebus_capucinus
ENSIPUG00000008657	polr3c	99	65.619	ENSCATG00000040166	POLR3C	99	64.835	Cercocebus_atys
ENSIPUG00000008657	polr3c	88	77.824	ENSCLAG00000001652	POLR3C	99	77.824	Chinchilla_lanigera
ENSIPUG00000008657	polr3c	99	65.989	ENSCSAG00000001762	POLR3C	99	65.201	Chlorocebus_sabaeus
ENSIPUG00000008657	polr3c	99	63.904	ENSCHOG00000006911	POLR3C	99	62.956	Choloepus_hoffmanni
ENSIPUG00000008657	polr3c	99	65.321	ENSCPBG00000007883	POLR3C	99	64.428	Chrysemys_picta_bellii
ENSIPUG00000008657	polr3c	99	44.627	ENSCING00000007024	-	100	44.809	Ciona_intestinalis
ENSIPUG00000008657	polr3c	99	44.384	ENSCSAVG00000008586	-	99	44.384	Ciona_savignyi
ENSIPUG00000008657	polr3c	99	65.804	ENSCANG00000032538	POLR3C	99	65.018	Colobus_angolensis_palliatus
ENSIPUG00000008657	polr3c	99	65.683	ENSCGRG00001005471	Polr3c	99	64.954	Cricetulus_griseus_chok1gshd
ENSIPUG00000008657	polr3c	99	65.683	ENSCGRG00000016787	Polr3c	99	64.954	Cricetulus_griseus_crigri
ENSIPUG00000008657	polr3c	99	76.895	ENSCSEG00000002425	polr3c	98	76.838	Cynoglossus_semilaevis
ENSIPUG00000008657	polr3c	99	74.635	ENSCVAG00000009443	polr3c	100	74.635	Cyprinodon_variegatus
ENSIPUG00000008657	polr3c	99	74.635	ENSCVAG00000022458	polr3c	100	74.635	Cyprinodon_variegatus
ENSIPUG00000008657	polr3c	100	82.878	ENSDARG00000057562	polr3c	100	82.149	Danio_rerio
ENSIPUG00000008657	polr3c	71	67.692	ENSDNOG00000012149	POLR3C	99	66.582	Dasypus_novemcinctus
ENSIPUG00000008657	polr3c	99	65.201	ENSDORG00000013430	Polr3c	99	64.954	Dipodomys_ordii
ENSIPUG00000008657	polr3c	99	30.939	FBgn0038057	CG12267	97	30.755	Drosophila_melanogaster
ENSIPUG00000008657	polr3c	100	55.839	ENSETEG00000017696	POLR3C	100	55.696	Echinops_telfairi
ENSIPUG00000008657	polr3c	99	65.930	ENSEASG00005007417	POLR3C	99	64.964	Equus_asinus_asinus
ENSIPUG00000008657	polr3c	99	63.720	ENSECAG00000023713	POLR3C	99	62.774	Equus_caballus
ENSIPUG00000008657	polr3c	99	63.284	ENSEEUG00000011124	POLR3C	99	63.303	Erinaceus_europaeus
ENSIPUG00000008657	polr3c	99	79.963	ENSELUG00000013209	polr3c	99	80.331	Esox_lucius
ENSIPUG00000008657	polr3c	99	66.667	ENSFCAG00000013360	POLR3C	99	65.693	Felis_catus
ENSIPUG00000008657	polr3c	99	65.201	ENSFDAG00000021078	POLR3C	99	64.469	Fukomys_damarensis
ENSIPUG00000008657	polr3c	99	74.453	ENSFHEG00000000872	polr3c	100	74.727	Fundulus_heteroclitus
ENSIPUG00000008657	polr3c	99	74.632	ENSGMOG00000018937	polr3c	99	74.449	Gadus_morhua
ENSIPUG00000008657	polr3c	86	60.797	ENSGALG00000052515	-	100	60.842	Gallus_gallus
ENSIPUG00000008657	polr3c	99	74.818	ENSGAFG00000014721	polr3c	100	75.182	Gambusia_affinis
ENSIPUG00000008657	polr3c	99	77.049	ENSGACG00000011829	polr3c	99	77.248	Gasterosteus_aculeatus
ENSIPUG00000008657	polr3c	99	65.009	ENSGAGG00000010176	POLR3C	99	64.825	Gopherus_agassizii
ENSIPUG00000008657	polr3c	99	65.619	ENSGGOG00000007279	POLR3C	99	64.835	Gorilla_gorilla
ENSIPUG00000008657	polr3c	99	75.818	ENSHBUG00000003619	polr3c	99	75.818	Haplochromis_burtoni
ENSIPUG00000008657	polr3c	99	64.835	ENSHGLG00000014978	POLR3C	99	64.286	Heterocephalus_glaber_female
ENSIPUG00000008657	polr3c	99	64.835	ENSHGLG00100015620	POLR3C	99	64.286	Heterocephalus_glaber_male
ENSIPUG00000008657	polr3c	99	72.844	ENSHCOG00000000823	polr3c	99	72.661	Hippocampus_comes
ENSIPUG00000008657	polr3c	99	66.483	ENSSTOG00000014601	POLR3C	99	65.751	Ictidomys_tridecemlineatus
ENSIPUG00000008657	polr3c	99	66.052	ENSJJAG00000011447	Polr3c	99	65.082	Jaculus_jaculus
ENSIPUG00000008657	polr3c	99	74.128	ENSKMAG00000001574	polr3c	99	74.128	Kryptolebias_marmoratus
ENSIPUG00000008657	polr3c	99	77.231	ENSLBEG00000026567	polr3c	99	76.685	Labrus_bergylta
ENSIPUG00000008657	polr3c	100	62.477	ENSLACG00000017216	POLR3C	100	61.649	Latimeria_chalumnae
ENSIPUG00000008657	polr3c	100	66.423	ENSLOCG00000006400	polr3c	100	65.511	Lepisosteus_oculatus
ENSIPUG00000008657	polr3c	99	66.114	ENSLAFG00000029485	POLR3C	99	65.146	Loxodonta_africana
ENSIPUG00000008657	polr3c	99	65.804	ENSMFAG00000040338	POLR3C	99	65.018	Macaca_fascicularis
ENSIPUG00000008657	polr3c	99	65.804	ENSMMUG00000016735	POLR3C	99	65.018	Macaca_mulatta
ENSIPUG00000008657	polr3c	99	65.804	ENSMNEG00000040944	POLR3C	99	65.018	Macaca_nemestrina
ENSIPUG00000008657	polr3c	99	65.804	ENSMLEG00000031091	POLR3C	99	65.018	Mandrillus_leucophaeus
ENSIPUG00000008657	polr3c	99	77.413	ENSMAMG00000014770	polr3c	99	76.951	Mastacembelus_armatus
ENSIPUG00000008657	polr3c	99	75.455	ENSMZEG00005015882	polr3c	99	75.455	Maylandia_zebra
ENSIPUG00000008657	polr3c	99	65.498	ENSMAUG00000001454	-	99	64.587	Mesocricetus_auratus
ENSIPUG00000008657	polr3c	78	55.035	ENSMAUG00000021521	-	98	53.721	Mesocricetus_auratus
ENSIPUG00000008657	polr3c	99	65.378	ENSMICG00000034253	POLR3C	99	64.014	Microcebus_murinus
ENSIPUG00000008657	polr3c	99	61.142	ENSMOCG00000000997	Polr3c	99	60.256	Microtus_ochrogaster
ENSIPUG00000008657	polr3c	99	77.248	ENSMMOG00000003989	polr3c	100	76.697	Mola_mola
ENSIPUG00000008657	polr3c	99	64.825	ENSMODG00000018745	-	73	64.364	Monodelphis_domestica
ENSIPUG00000008657	polr3c	99	76.330	ENSMALG00000000156	polr3c	99	75.686	Monopterus_albus
ENSIPUG00000008657	polr3c	99	65.683	MGP_CAROLIEiJ_G0025390	Polr3c	99	64.771	Mus_caroli
ENSIPUG00000008657	polr3c	99	65.498	ENSMUSG00000028099	Polr3c	99	64.587	Mus_musculus
ENSIPUG00000008657	polr3c	99	65.683	MGP_PahariEiJ_G0026835	Polr3c	99	64.587	Mus_pahari
ENSIPUG00000008657	polr3c	99	65.314	MGP_SPRETEiJ_G0026337	Polr3c	99	64.220	Mus_spretus
ENSIPUG00000008657	polr3c	99	65.930	ENSMPUG00000000656	POLR3C	99	65.146	Mustela_putorius_furo
ENSIPUG00000008657	polr3c	99	65.505	ENSMLUG00000004060	POLR3C	99	64.727	Myotis_lucifugus
ENSIPUG00000008657	polr3c	99	64.945	ENSNGAG00000013090	Polr3c	99	64.652	Nannospalax_galili
ENSIPUG00000008657	polr3c	99	75.818	ENSNBRG00000003707	polr3c	99	76.000	Neolamprologus_brichardi
ENSIPUG00000008657	polr3c	99	65.804	ENSNLEG00000005645	POLR3C	99	65.018	Nomascus_leucogenys
ENSIPUG00000008657	polr3c	86	76.230	ENSMEUG00000012664	POLR3C	86	76.230	Notamacropus_eugenii
ENSIPUG00000008657	polr3c	99	63.904	ENSOPRG00000004244	POLR3C	99	62.821	Ochotona_princeps
ENSIPUG00000008657	polr3c	99	64.652	ENSODEG00000000304	POLR3C	99	64.103	Octodon_degus
ENSIPUG00000008657	polr3c	99	76.182	ENSONIG00000006370	polr3c	99	76.182	Oreochromis_niloticus
ENSIPUG00000008657	polr3c	68	46.257	ENSOANG00000000559	-	100	45.989	Ornithorhynchus_anatinus
ENSIPUG00000008657	polr3c	99	65.746	ENSOCUG00000003050	POLR3C	99	64.652	Oryctolagus_cuniculus
ENSIPUG00000008657	polr3c	99	74.908	ENSORLG00000010133	polr3c	99	74.908	Oryzias_latipes
ENSIPUG00000008657	polr3c	99	74.908	ENSORLG00020009245	polr3c	99	74.908	Oryzias_latipes_hni
ENSIPUG00000008657	polr3c	99	74.354	ENSORLG00015015223	polr3c	99	74.354	Oryzias_latipes_hsok
ENSIPUG00000008657	polr3c	99	75.046	ENSOMEG00000008558	polr3c	99	74.679	Oryzias_melastigma
ENSIPUG00000008657	polr3c	99	65.378	ENSOGAG00000000209	POLR3C	99	64.599	Otolemur_garnettii
ENSIPUG00000008657	polr3c	99	66.483	ENSOARG00000020588	POLR3C	99	65.751	Ovis_aries
ENSIPUG00000008657	polr3c	99	65.804	ENSPPAG00000025184	POLR3C	99	65.018	Pan_paniscus
ENSIPUG00000008657	polr3c	99	66.667	ENSPPRG00000008809	POLR3C	99	65.693	Panthera_pardus
ENSIPUG00000008657	polr3c	99	66.667	ENSPTIG00000009916	POLR3C	99	65.693	Panthera_tigris_altaica
ENSIPUG00000008657	polr3c	99	65.804	ENSPTRG00000001208	POLR3C	99	65.018	Pan_troglodytes
ENSIPUG00000008657	polr3c	99	65.804	ENSPANG00000019404	POLR3C	99	65.018	Papio_anubis
ENSIPUG00000008657	polr3c	100	75.912	ENSPKIG00000014883	polr3c	100	74.414	Paramormyrops_kingsleyae
ENSIPUG00000008657	polr3c	99	63.720	ENSPSIG00000004694	POLR3C	99	63.919	Pelodiscus_sinensis
ENSIPUG00000008657	polr3c	99	74.033	ENSPMGG00000007761	polr3c	99	74.033	Periophthalmus_magnuspinnatus
ENSIPUG00000008657	polr3c	99	65.129	ENSPEMG00000016322	Polr3c	99	64.037	Peromyscus_maniculatus_bairdii
ENSIPUG00000008657	polr3c	99	59.213	ENSPMAG00000006993	polr3c	99	58.855	Petromyzon_marinus
ENSIPUG00000008657	polr3c	99	65.688	ENSPCIG00000011954	POLR3C	99	65.385	Phascolarctos_cinereus
ENSIPUG00000008657	polr3c	99	74.499	ENSPFOG00000014106	polr3c	100	74.773	Poecilia_formosa
ENSIPUG00000008657	polr3c	99	74.862	ENSPLAG00000018932	polr3c	100	74.679	Poecilia_latipinna
ENSIPUG00000008657	polr3c	99	74.499	ENSPMEG00000023273	polr3c	100	74.773	Poecilia_mexicana
ENSIPUG00000008657	polr3c	99	75.046	ENSPREG00000017050	polr3c	100	75.046	Poecilia_reticulata
ENSIPUG00000008657	polr3c	99	65.619	ENSPPYG00000000936	POLR3C	99	64.835	Pongo_abelii
ENSIPUG00000008657	polr3c	90	65.992	ENSPCAG00000010501	POLR3C	99	65.130	Procavia_capensis
ENSIPUG00000008657	polr3c	99	57.102	ENSPCOG00000024937	POLR3C	99	55.556	Propithecus_coquereli
ENSIPUG00000008657	polr3c	99	66.298	ENSPVAG00000014483	POLR3C	99	65.328	Pteropus_vampyrus
ENSIPUG00000008657	polr3c	99	75.818	ENSPNYG00000004504	polr3c	99	75.818	Pundamilia_nyererei
ENSIPUG00000008657	polr3c	98	84.515	ENSPNAG00000018675	polr3c	100	83.883	Pygocentrus_nattereri
ENSIPUG00000008657	polr3c	99	65.498	ENSRNOG00000033560	Polr3c	99	64.587	Rattus_norvegicus
ENSIPUG00000008657	polr3c	99	65.434	ENSRBIG00000035432	POLR3C	99	64.652	Rhinopithecus_bieti
ENSIPUG00000008657	polr3c	99	65.434	ENSRROG00000039959	POLR3C	99	64.652	Rhinopithecus_roxellana
ENSIPUG00000008657	polr3c	90	63.878	ENSSBOG00000028429	POLR3C	98	62.626	Saimiri_boliviensis_boliviensis
ENSIPUG00000008657	polr3c	99	65.138	ENSSHAG00000018565	POLR3C	99	63.834	Sarcophilus_harrisii
ENSIPUG00000008657	polr3c	100	76.095	ENSSFOG00015021863	polr3c	100	75.448	Scleropages_formosus
ENSIPUG00000008657	polr3c	99	76.993	ENSSMAG00000016000	polr3c	99	76.993	Scophthalmus_maximus
ENSIPUG00000008657	polr3c	99	78.532	ENSSDUG00000006590	polr3c	99	77.615	Seriola_dumerili
ENSIPUG00000008657	polr3c	99	77.615	ENSSLDG00000015614	polr3c	99	77.064	Seriola_lalandi_dorsalis
ENSIPUG00000008657	polr3c	60	72.590	ENSSARG00000014380	POLR3C	99	72.590	Sorex_araneus
ENSIPUG00000008657	polr3c	99	62.523	ENSSPUG00000001834	POLR3C	99	62.138	Sphenodon_punctatus
ENSIPUG00000008657	polr3c	99	76.460	ENSSPAG00000022520	polr3c	99	76.460	Stegastes_partitus
ENSIPUG00000008657	polr3c	99	65.193	ENSSSCG00000006691	POLR3C	99	64.416	Sus_scrofa
ENSIPUG00000008657	polr3c	99	60.037	ENSTGUG00000016941	POLR3C	99	59.854	Taeniopygia_guttata
ENSIPUG00000008657	polr3c	99	73.394	ENSTRUG00000010726	polr3c	100	73.394	Takifugu_rubripes
ENSIPUG00000008657	polr3c	99	75.596	ENSTNIG00000019501	polr3c	100	75.596	Tetraodon_nigroviridis
ENSIPUG00000008657	polr3c	74	66.914	ENSTBEG00000015610	POLR3C	99	65.686	Tupaia_belangeri
ENSIPUG00000008657	polr3c	53	65.574	ENSTTRG00000009216	POLR3C	55	65.574	Tursiops_truncatus
ENSIPUG00000008657	polr3c	99	66.298	ENSUAMG00000021906	POLR3C	99	65.511	Ursus_americanus
ENSIPUG00000008657	polr3c	99	66.298	ENSUMAG00000010180	POLR3C	99	65.511	Ursus_maritimus
ENSIPUG00000008657	polr3c	99	65.934	ENSVVUG00000007421	POLR3C	99	65.385	Vulpes_vulpes
ENSIPUG00000008657	polr3c	99	69.358	ENSXCOG00000019524	polr3c	100	69.358	Xiphophorus_couchianus
ENSIPUG00000008657	polr3c	99	74.270	ENSXMAG00000016215	polr3c	100	74.229	Xiphophorus_maculatus