EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000008697 (Gene tree)
Gene ID: 108264796
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 12924 bases
Position: chr4:28248891-28261814
Accession: 108264796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000012856	HARE-HTH	PF05066.13	1.3e-15	1	1
ENSIPUP00000012784	HARE-HTH	PF05066.13	1.5e-15	1	1
ENSIPUP00000012821	HARE-HTH	PF05066.13	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000013323	-	5945	XM_017466666	ENSIPUP00000012784	544 (aa)	XP_017322155	A0A2D0QV14
ENSIPUT00000013361	-	5682	XM_017466665	ENSIPUP00000012821	544 (aa)	XP_017322154	A0A2D0QV14
ENSIPUT00000013395	-	1449	-	ENSIPUP00000012856	482 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000008697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008697	tbrg1	98	70.018	ENSAPOG00000017352	tbrg1	99	70.275	Acanthochromis_polyacanthus
ENSIPUG00000008697	tbrg1	98	70.021	ENSACIG00000021274	tbrg1	93	72.255	Amphilophus_citrinellus
ENSIPUG00000008697	tbrg1	98	69.691	ENSAOCG00000018605	tbrg1	99	69.763	Amphiprion_ocellaris
ENSIPUG00000008697	tbrg1	98	69.691	ENSAPEG00000022443	tbrg1	99	69.763	Amphiprion_percula
ENSIPUG00000008697	tbrg1	93	75.870	ENSATEG00000023537	tbrg1	98	70.956	Anabas_testudineus
ENSIPUG00000008697	tbrg1	98	72.294	ENSACLG00000000281	tbrg1	99	71.927	Astatotilapia_calliptera
ENSIPUG00000008697	tbrg1	99	82.169	ENSAMXG00000008381	tbrg1	99	81.801	Astyanax_mexicanus
ENSIPUG00000008697	tbrg1	93	74.403	ENSCSEG00000002445	tbrg1	92	73.559	Cynoglossus_semilaevis
ENSIPUG00000008697	tbrg1	93	71.183	ENSCVAG00000019626	tbrg1	93	69.903	Cyprinodon_variegatus
ENSIPUG00000008697	tbrg1	99	75.092	ENSDARG00000074996	tbrg1	99	75.458	Danio_rerio
ENSIPUG00000008697	tbrg1	88	52.381	ENSEBUG00000014060	tbrg1	90	50.106	Eptatretus_burgeri
ENSIPUG00000008697	tbrg1	98	73.394	ENSELUG00000017458	tbrg1	98	71.927	Esox_lucius
ENSIPUG00000008697	tbrg1	94	66.250	ENSFHEG00000004283	tbrg1	90	67.742	Fundulus_heteroclitus
ENSIPUG00000008697	tbrg1	93	71.336	ENSGAFG00000000204	tbrg1	99	66.848	Gambusia_affinis
ENSIPUG00000008697	tbrg1	98	72.294	ENSHBUG00000004935	tbrg1	99	71.927	Haplochromis_burtoni
ENSIPUG00000008697	tbrg1	93	68.590	ENSHCOG00000010588	tbrg1	93	68.555	Hippocampus_comes
ENSIPUG00000008697	tbrg1	98	68.681	ENSKMAG00000002775	tbrg1	99	68.864	Kryptolebias_marmoratus
ENSIPUG00000008697	tbrg1	98	70.000	ENSLBEG00000017559	tbrg1	96	71.622	Labrus_bergylta
ENSIPUG00000008697	tbrg1	98	74.632	ENSLOCG00000003093	tbrg1	96	74.212	Lepisosteus_oculatus
ENSIPUG00000008697	tbrg1	98	71.376	ENSMAMG00000000876	tbrg1	99	71.376	Mastacembelus_armatus
ENSIPUG00000008697	tbrg1	98	71.927	ENSMZEG00005013545	tbrg1	91	71.560	Maylandia_zebra
ENSIPUG00000008697	tbrg1	93	70.065	ENSMMOG00000005314	tbrg1	90	70.528	Mola_mola
ENSIPUG00000008697	tbrg1	93	73.970	ENSMALG00000011630	tbrg1	98	72.475	Monopterus_albus
ENSIPUG00000008697	tbrg1	93	76.522	ENSNBRG00000017490	tbrg1	98	71.215	Neolamprologus_brichardi
ENSIPUG00000008697	tbrg1	98	72.294	ENSONIG00000005284	tbrg1	99	71.927	Oreochromis_niloticus
ENSIPUG00000008697	tbrg1	98	69.273	ENSORLG00000014519	tbrg1	99	69.708	Oryzias_latipes
ENSIPUG00000008697	tbrg1	98	68.909	ENSORLG00020009567	tbrg1	99	69.343	Oryzias_latipes_hni
ENSIPUG00000008697	tbrg1	98	68.909	ENSORLG00015000448	tbrg1	99	69.343	Oryzias_latipes_hsok
ENSIPUG00000008697	tbrg1	93	73.593	ENSOMEG00000006130	tbrg1	92	73.413	Oryzias_melastigma
ENSIPUG00000008697	tbrg1	94	75.162	ENSPKIG00000012274	tbrg1	88	74.118	Paramormyrops_kingsleyae
ENSIPUG00000008697	tbrg1	98	69.274	ENSPMGG00000015968	tbrg1	99	69.274	Periophthalmus_magnuspinnatus
ENSIPUG00000008697	tbrg1	93	71.154	ENSPFOG00000004279	tbrg1	92	71.457	Poecilia_formosa
ENSIPUG00000008697	tbrg1	93	70.940	ENSPLAG00000001227	tbrg1	94	71.285	Poecilia_latipinna
ENSIPUG00000008697	tbrg1	93	71.154	ENSPMEG00000000955	tbrg1	92	71.457	Poecilia_mexicana
ENSIPUG00000008697	tbrg1	93	69.620	ENSPREG00000005246	tbrg1	93	70.039	Poecilia_reticulata
ENSIPUG00000008697	tbrg1	88	76.376	ENSPNYG00000012625	tbrg1	98	71.908	Pundamilia_nyererei
ENSIPUG00000008697	tbrg1	99	81.215	ENSPNAG00000028332	tbrg1	99	81.400	Pygocentrus_nattereri
ENSIPUG00000008697	tbrg1	94	74.784	ENSSFOG00015009308	tbrg1	99	68.675	Scleropages_formosus
ENSIPUG00000008697	tbrg1	98	69.669	ENSSMAG00000002529	tbrg1	100	70.363	Scophthalmus_maximus
ENSIPUG00000008697	tbrg1	98	71.481	ENSSDUG00000013674	tbrg1	99	71.560	Seriola_dumerili
ENSIPUG00000008697	tbrg1	93	75.161	ENSSLDG00000008932	tbrg1	95	74.950	Seriola_lalandi_dorsalis
ENSIPUG00000008697	tbrg1	85	73.934	ENSSPAG00000004808	tbrg1	99	71.706	Stegastes_partitus
ENSIPUG00000008697	tbrg1	93	72.113	ENSTRUG00000005960	tbrg1	95	71.173	Takifugu_rubripes
ENSIPUG00000008697	tbrg1	93	70.108	ENSXMAG00000001551	tbrg1	98	67.647	Xiphophorus_maculatus