EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000008750 (Gene tree)
Gene ID: 108278759
Gene Symbol: srsf1b
Alias: sfrs1|sfrs1b|wu:fb80g05|zgc:111894|zgc:65898|zgc:76897
Full Name: serine/arginine-rich splicing factor 1B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 2686 bases
Position: chr18:22910587-22913272
Accession: 108278759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000012841	RRM_1	PF00076.22	4.5e-33	1	2
ENSIPUP00000012841	RRM_1	PF00076.22	4.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000013380	-	865	XM_017492317	ENSIPUP00000012841	245 (aa)	XP_017347806	A0A2D0SZ47

Gene Model

Click here to download ENSIPUG00000008750's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG
ipu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000008750	srsf1b	66	47.929	ENSIPUG00000004776	-	58	44.970
ENSIPUG00000008750	srsf1b	78	91.457	ENSIPUG00000017039	srsf1a	79	94.472
ENSIPUG00000008750	srsf1b	67	42.077	ENSIPUG00000003439	srsf5a	64	42.623
ENSIPUG00000008750	srsf1b	91	62.996	ENSIPUG00000005511	srsf9	72	70.621

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008750	srsf1b	100	95.968	ENSG00000136450	SRSF1	100	96.923	Homo_sapiens
ENSIPUG00000008750	srsf1b	78	91.667	ENSAPOG00000002748	-	78	89.583	Acanthochromis_polyacanthus
ENSIPUG00000008750	srsf1b	80	89.286	ENSAPOG00000008542	-	81	88.177	Acanthochromis_polyacanthus
ENSIPUG00000008750	srsf1b	80	92.347	ENSAMEG00000002635	SRSF1	79	93.367	Ailuropoda_melanoleuca
ENSIPUG00000008750	srsf1b	78	91.667	ENSACIG00000008091	srsf1a	83	90.625	Amphilophus_citrinellus
ENSIPUG00000008750	srsf1b	80	89.163	ENSAOCG00000000337	-	82	88.177	Amphiprion_ocellaris
ENSIPUG00000008750	srsf1b	78	92.188	ENSAOCG00000010671	-	83	89.583	Amphiprion_ocellaris
ENSIPUG00000008750	srsf1b	80	89.163	ENSAPEG00000023352	-	81	88.177	Amphiprion_percula
ENSIPUG00000008750	srsf1b	78	92.188	ENSAPEG00000009915	-	83	89.583	Amphiprion_percula
ENSIPUG00000008750	srsf1b	78	92.188	ENSATEG00000022403	-	77	89.583	Anabas_testudineus
ENSIPUG00000008750	srsf1b	80	89.286	ENSATEG00000021567	-	81	88.776	Anabas_testudineus
ENSIPUG00000008750	srsf1b	100	96.774	ENSACAG00000005542	-	100	96.774	Anolis_carolinensis
ENSIPUG00000008750	srsf1b	81	69.849	ENSANAG00000025417	-	75	68.878	Aotus_nancymaae
ENSIPUG00000008750	srsf1b	99	95.935	ENSANAG00000020583	-	99	95.833	Aotus_nancymaae
ENSIPUG00000008750	srsf1b	95	88.750	ENSAMXG00000035996	srsf1a	79	94.000	Astyanax_mexicanus
ENSIPUG00000008750	srsf1b	74	87.745	ENSAMXG00000024373	-	94	87.745	Astyanax_mexicanus
ENSIPUG00000008750	srsf1b	100	95.968	ENSBTAG00000014766	SRSF1	100	95.968	Bos_taurus
ENSIPUG00000008750	srsf1b	80	85.714	ENSCJAG00000008111	-	88	86.802	Callithrix_jacchus
ENSIPUG00000008750	srsf1b	99	95.935	ENSCJAG00000041713	-	99	95.833	Callithrix_jacchus
ENSIPUG00000008750	srsf1b	99	95.935	ENSCAFG00000017430	SRSF1	97	95.935	Canis_familiaris
ENSIPUG00000008750	srsf1b	99	95.935	ENSCAFG00020025632	-	97	95.935	Canis_lupus_dingo
ENSIPUG00000008750	srsf1b	100	95.968	ENSCHIG00000010787	SRSF1	100	95.968	Capra_hircus
ENSIPUG00000008750	srsf1b	99	95.935	ENSTSYG00000013899	-	99	95.833	Carlito_syrichta
ENSIPUG00000008750	srsf1b	100	95.968	ENSCPOG00000032681	-	100	95.968	Cavia_porcellus
ENSIPUG00000008750	srsf1b	100	95.968	ENSCCAG00000029484	-	100	95.968	Cebus_capucinus
ENSIPUG00000008750	srsf1b	99	95.935	ENSCATG00000042294	-	99	95.833	Cercocebus_atys
ENSIPUG00000008750	srsf1b	100	95.968	ENSCLAG00000014707	-	100	95.968	Chinchilla_lanigera
ENSIPUG00000008750	srsf1b	99	95.122	ENSCSAG00000005642	-	97	95.122	Chlorocebus_sabaeus
ENSIPUG00000008750	srsf1b	100	95.968	ENSCHOG00000001899	SRSF1	100	95.968	Choloepus_hoffmanni
ENSIPUG00000008750	srsf1b	100	97.177	ENSCPBG00000009851	-	100	97.177	Chrysemys_picta_bellii
ENSIPUG00000008750	srsf1b	99	95.935	ENSCANG00000029726	-	99	95.833	Colobus_angolensis_palliatus
ENSIPUG00000008750	srsf1b	99	95.935	ENSCGRG00001000670	Srsf1	97	95.935	Cricetulus_griseus_chok1gshd
ENSIPUG00000008750	srsf1b	100	95.968	ENSCGRG00000005590	Srsf1	100	95.968	Cricetulus_griseus_crigri
ENSIPUG00000008750	srsf1b	80	82.547	ENSCSEG00000009973	-	81	81.604	Cynoglossus_semilaevis
ENSIPUG00000008750	srsf1b	78	92.857	ENSCSEG00000014272	-	78	92.857	Cynoglossus_semilaevis
ENSIPUG00000008750	srsf1b	78	92.188	ENSCVAG00000018617	-	78	89.583	Cyprinodon_variegatus
ENSIPUG00000008750	srsf1b	79	89.286	ENSCVAG00000005458	-	91	89.130	Cyprinodon_variegatus
ENSIPUG00000008750	srsf1b	99	92.188	ENSDARG00000057691	srsf1a	99	92.188	Danio_rerio
ENSIPUG00000008750	srsf1b	99	99.180	ENSDARG00000017843	srsf1b	99	99.180	Danio_rerio
ENSIPUG00000008750	srsf1b	99	95.935	ENSDNOG00000011737	-	97	95.935	Dasypus_novemcinctus
ENSIPUG00000008750	srsf1b	100	95.968	ENSDORG00000015082	Srsf1	100	95.968	Dipodomys_ordii
ENSIPUG00000008750	srsf1b	75	91.304	ENSETEG00000005349	-	63	90.761	Echinops_telfairi
ENSIPUG00000008750	srsf1b	99	95.935	ENSEASG00005002922	-	97	95.935	Equus_asinus_asinus
ENSIPUG00000008750	srsf1b	100	95.968	ENSECAG00000016654	SRSF1	100	95.968	Equus_caballus
ENSIPUG00000008750	srsf1b	75	95.652	ENSEEUG00000009255	-	63	95.652	Erinaceus_europaeus
ENSIPUG00000008750	srsf1b	79	96.392	ENSELUG00000021646	srsf1a	77	96.392	Esox_lucius
ENSIPUG00000008750	srsf1b	99	95.935	ENSFCAG00000002250	-	97	95.935	Felis_catus
ENSIPUG00000008750	srsf1b	99	80.894	ENSFALG00000005062	-	97	80.894	Ficedula_albicollis
ENSIPUG00000008750	srsf1b	100	95.968	ENSFDAG00000010646	-	100	95.968	Fukomys_damarensis
ENSIPUG00000008750	srsf1b	78	92.188	ENSFHEG00000003174	srsf1a	83	89.583	Fundulus_heteroclitus
ENSIPUG00000008750	srsf1b	92	88.889	ENSGMOG00000014787	-	80	89.583	Gadus_morhua
ENSIPUG00000008750	srsf1b	100	97.177	ENSGALG00000005525	SRSF1	100	97.177	Gallus_gallus
ENSIPUG00000008750	srsf1b	80	87.245	ENSGACG00000020621	srsf1b	80	85.714	Gasterosteus_aculeatus
ENSIPUG00000008750	srsf1b	99	97.154	ENSGAGG00000022965	-	97	97.154	Gopherus_agassizii
ENSIPUG00000008750	srsf1b	99	95.935	ENSGGOG00000004386	SRSF1	99	95.833	Gorilla_gorilla
ENSIPUG00000008750	srsf1b	80	90.256	ENSHBUG00000016788	srsf1a	80	90.625	Haplochromis_burtoni
ENSIPUG00000008750	srsf1b	87	96.279	ENSHGLG00000000669	-	100	96.279	Heterocephalus_glaber_female
ENSIPUG00000008750	srsf1b	87	96.279	ENSHGLG00000000600	-	100	96.279	Heterocephalus_glaber_female
ENSIPUG00000008750	srsf1b	100	95.968	ENSHGLG00100016906	-	100	95.968	Heterocephalus_glaber_male
ENSIPUG00000008750	srsf1b	78	84.772	ENSHCOG00000018918	srsf1a	77	87.817	Hippocampus_comes
ENSIPUG00000008750	srsf1b	100	95.968	ENSSTOG00000000243	-	100	95.968	Ictidomys_tridecemlineatus
ENSIPUG00000008750	srsf1b	51	91.270	ENSJJAG00000014464	-	95	91.270	Jaculus_jaculus
ENSIPUG00000008750	srsf1b	100	95.968	ENSJJAG00000000102	-	100	95.968	Jaculus_jaculus
ENSIPUG00000008750	srsf1b	78	92.708	ENSKMAG00000019232	srsf1a	78	92.708	Kryptolebias_marmoratus
ENSIPUG00000008750	srsf1b	80	85.500	ENSLBEG00000015294	-	80	86.000	Labrus_bergylta
ENSIPUG00000008750	srsf1b	78	93.229	ENSLBEG00000020864	-	83	90.625	Labrus_bergylta
ENSIPUG00000008750	srsf1b	80	94.359	ENSLACG00000014160	srsf1a	73	94.359	Latimeria_chalumnae
ENSIPUG00000008750	srsf1b	100	97.571	ENSLOCG00000005994	srsf1a	100	97.571	Lepisosteus_oculatus
ENSIPUG00000008750	srsf1b	100	95.968	ENSLAFG00000025743	SRSF1	100	95.968	Loxodonta_africana
ENSIPUG00000008750	srsf1b	100	95.968	ENSMFAG00000040003	-	100	95.968	Macaca_fascicularis
ENSIPUG00000008750	srsf1b	99	95.935	ENSMMUG00000004725	SRSF1	99	95.833	Macaca_mulatta
ENSIPUG00000008750	srsf1b	100	87.500	ENSMMUG00000003260	-	95	90.306	Macaca_mulatta
ENSIPUG00000008750	srsf1b	100	87.097	ENSMNEG00000015983	-	78	91.371	Macaca_nemestrina
ENSIPUG00000008750	srsf1b	99	95.935	ENSMNEG00000027680	-	99	95.833	Macaca_nemestrina
ENSIPUG00000008750	srsf1b	100	95.968	ENSMLEG00000040509	SRSF1	100	95.968	Mandrillus_leucophaeus
ENSIPUG00000008750	srsf1b	100	87.854	ENSMLEG00000015243	-	77	90.306	Mandrillus_leucophaeus
ENSIPUG00000008750	srsf1b	78	92.188	ENSMAMG00000018454	-	78	89.583	Mastacembelus_armatus
ENSIPUG00000008750	srsf1b	80	95.408	ENSMAMG00000019691	-	81	95.408	Mastacembelus_armatus
ENSIPUG00000008750	srsf1b	80	90.306	ENSMAMG00000019687	-	80	87.755	Mastacembelus_armatus
ENSIPUG00000008750	srsf1b	100	95.968	ENSMAUG00000021845	Srsf1	100	95.968	Mesocricetus_auratus
ENSIPUG00000008750	srsf1b	99	95.935	ENSMICG00000013639	-	99	95.833	Microcebus_murinus
ENSIPUG00000008750	srsf1b	100	95.968	ENSMOCG00000001996	Srsf1	100	95.968	Microtus_ochrogaster
ENSIPUG00000008750	srsf1b	78	93.229	ENSMMOG00000014354	srsf1a	83	90.104	Mola_mola
ENSIPUG00000008750	srsf1b	75	95.676	ENSMODG00000014781	-	63	95.676	Monodelphis_domestica
ENSIPUG00000008750	srsf1b	83	77.833	ENSMALG00000007763	-	79	79.082	Monopterus_albus
ENSIPUG00000008750	srsf1b	78	91.667	ENSMALG00000017129	-	75	89.062	Monopterus_albus
ENSIPUG00000008750	srsf1b	100	95.968	MGP_CAROLIEiJ_G0016943	Srsf1	100	95.968	Mus_caroli
ENSIPUG00000008750	srsf1b	100	95.968	ENSMUSG00000018379	Srsf1	100	95.968	Mus_musculus
ENSIPUG00000008750	srsf1b	100	95.968	MGP_PahariEiJ_G0018074	Srsf1	100	95.968	Mus_pahari
ENSIPUG00000008750	srsf1b	100	95.968	MGP_SPRETEiJ_G0017790	Srsf1	100	95.968	Mus_spretus
ENSIPUG00000008750	srsf1b	100	95.968	ENSMPUG00000015369	SRSF1	100	95.968	Mustela_putorius_furo
ENSIPUG00000008750	srsf1b	100	95.968	ENSMLUG00000011040	SRSF1	100	95.968	Myotis_lucifugus
ENSIPUG00000008750	srsf1b	82	86.139	ENSMLUG00000023995	-	79	86.735	Myotis_lucifugus
ENSIPUG00000008750	srsf1b	100	95.968	ENSNGAG00000011395	Srsf1	100	95.968	Nannospalax_galili
ENSIPUG00000008750	srsf1b	100	83.673	ENSNBRG00000008041	srsf1b	80	80.612	Neolamprologus_brichardi
ENSIPUG00000008750	srsf1b	99	95.935	ENSNLEG00000008088	-	99	95.833	Nomascus_leucogenys
ENSIPUG00000008750	srsf1b	51	91.339	ENSMEUG00000002783	-	100	90.551	Notamacropus_eugenii
ENSIPUG00000008750	srsf1b	73	95.628	ENSOPRG00000001234	-	100	95.628	Ochotona_princeps
ENSIPUG00000008750	srsf1b	100	95.565	ENSODEG00000011481	-	100	95.565	Octodon_degus
ENSIPUG00000008750	srsf1b	80	90.256	ENSONIG00000013160	-	77	90.625	Oreochromis_niloticus
ENSIPUG00000008750	srsf1b	96	92.735	ENSONIG00000004860	-	81	95.408	Oreochromis_niloticus
ENSIPUG00000008750	srsf1b	100	70.120	ENSOCUG00000010894	-	77	72.680	Oryctolagus_cuniculus
ENSIPUG00000008750	srsf1b	78	92.188	ENSORLG00000004580	srsf1a	78	89.583	Oryzias_latipes
ENSIPUG00000008750	srsf1b	78	92.188	ENSORLG00020009456	srsf1a	83	89.583	Oryzias_latipes_hni
ENSIPUG00000008750	srsf1b	78	92.188	ENSORLG00015014384	srsf1a	83	89.583	Oryzias_latipes_hsok
ENSIPUG00000008750	srsf1b	71	90.286	ENSOMEG00000004106	srsf1a	71	87.429	Oryzias_melastigma
ENSIPUG00000008750	srsf1b	100	95.968	ENSOGAG00000025950	-	100	95.968	Otolemur_garnettii
ENSIPUG00000008750	srsf1b	100	92.308	ENSOARG00000008323	SRSF1	100	92.308	Ovis_aries
ENSIPUG00000008750	srsf1b	100	95.968	ENSPPAG00000043403	-	100	95.968	Pan_paniscus
ENSIPUG00000008750	srsf1b	100	95.968	ENSPPRG00000004238	-	100	95.968	Panthera_pardus
ENSIPUG00000008750	srsf1b	99	95.935	ENSPTRG00000049077	SRSF1	99	95.833	Pan_troglodytes
ENSIPUG00000008750	srsf1b	99	95.935	ENSPANG00000022305	-	99	95.833	Papio_anubis
ENSIPUG00000008750	srsf1b	99	72.840	ENSPANG00000030275	-	75	68.718	Papio_anubis
ENSIPUG00000008750	srsf1b	100	98.776	ENSPKIG00000012857	srsf1b	100	98.776	Paramormyrops_kingsleyae
ENSIPUG00000008750	srsf1b	79	95.361	ENSPKIG00000007204	srsf1a	99	96.327	Paramormyrops_kingsleyae
ENSIPUG00000008750	srsf1b	80	86.432	ENSPSIG00000009000	-	78	97.917	Pelodiscus_sinensis
ENSIPUG00000008750	srsf1b	80	87.179	ENSPMGG00000005467	-	78	85.417	Periophthalmus_magnuspinnatus
ENSIPUG00000008750	srsf1b	78	89.583	ENSPMGG00000013112	-	82	88.021	Periophthalmus_magnuspinnatus
ENSIPUG00000008750	srsf1b	100	95.968	ENSPEMG00000021416	Srsf1	100	95.968	Peromyscus_maniculatus_bairdii
ENSIPUG00000008750	srsf1b	100	95.984	ENSPCIG00000006076	-	100	95.984	Phascolarctos_cinereus
ENSIPUG00000008750	srsf1b	80	89.447	ENSPFOG00000018325	-	70	89.744	Poecilia_formosa
ENSIPUG00000008750	srsf1b	80	89.447	ENSPLAG00000008416	srsf1b	79	89.744	Poecilia_latipinna
ENSIPUG00000008750	srsf1b	80	89.447	ENSPMEG00000002388	-	79	89.744	Poecilia_mexicana
ENSIPUG00000008750	srsf1b	50	90.164	ENSPMEG00000014312	-	98	87.705	Poecilia_mexicana
ENSIPUG00000008750	srsf1b	50	90.164	ENSPMEG00000020607	-	98	87.705	Poecilia_mexicana
ENSIPUG00000008750	srsf1b	78	92.188	ENSPREG00000009667	srsf1a	78	89.583	Poecilia_reticulata
ENSIPUG00000008750	srsf1b	100	95.968	ENSPPYG00000008240	SRSF1	100	95.968	Pongo_abelii
ENSIPUG00000008750	srsf1b	100	95.968	ENSPCAG00000005199	SRSF1	100	95.968	Procavia_capensis
ENSIPUG00000008750	srsf1b	81	76.238	ENSPCOG00000025736	-	95	75.897	Propithecus_coquereli
ENSIPUG00000008750	srsf1b	100	95.968	ENSPCOG00000023654	-	100	95.968	Propithecus_coquereli
ENSIPUG00000008750	srsf1b	75	97.521	ENSPVAG00000000519	-	75	97.521	Pteropus_vampyrus
ENSIPUG00000008750	srsf1b	95	92.735	ENSPNAG00000022241	srsf1a	79	94.330	Pygocentrus_nattereri
ENSIPUG00000008750	srsf1b	100	96.735	ENSPNAG00000014601	srsf1b	100	96.735	Pygocentrus_nattereri
ENSIPUG00000008750	srsf1b	100	95.968	ENSRNOG00000050323	Srsf1	100	95.968	Rattus_norvegicus
ENSIPUG00000008750	srsf1b	99	95.935	ENSRBIG00000034445	-	99	95.833	Rhinopithecus_bieti
ENSIPUG00000008750	srsf1b	100	95.968	ENSRROG00000041506	-	100	95.968	Rhinopithecus_roxellana
ENSIPUG00000008750	srsf1b	100	95.968	ENSSBOG00000025377	-	100	95.968	Saimiri_boliviensis_boliviensis
ENSIPUG00000008750	srsf1b	100	95.984	ENSSHAG00000002552	-	100	95.984	Sarcophilus_harrisii
ENSIPUG00000008750	srsf1b	99	96.748	ENSSFOG00015004800	srsf1a	99	96.748	Scleropages_formosus
ENSIPUG00000008750	srsf1b	80	87.255	ENSSMAG00000009719	-	80	86.275	Scophthalmus_maximus
ENSIPUG00000008750	srsf1b	78	92.708	ENSSMAG00000007018	-	78	90.104	Scophthalmus_maximus
ENSIPUG00000008750	srsf1b	100	77.912	ENSSDUG00000003929	-	84	85.000	Seriola_dumerili
ENSIPUG00000008750	srsf1b	78	93.229	ENSSDUG00000011303	-	83	90.625	Seriola_dumerili
ENSIPUG00000008750	srsf1b	95	78.541	ENSSLDG00000016895	-	78	87.634	Seriola_lalandi_dorsalis
ENSIPUG00000008750	srsf1b	78	93.229	ENSSLDG00000010543	-	78	90.625	Seriola_lalandi_dorsalis
ENSIPUG00000008750	srsf1b	80	79.188	ENSSLDG00000016868	-	78	82.741	Seriola_lalandi_dorsalis
ENSIPUG00000008750	srsf1b	75	95.652	ENSSARG00000010949	-	63	95.652	Sorex_araneus
ENSIPUG00000008750	srsf1b	99	97.154	ENSSPUG00000000804	-	97	97.154	Sphenodon_punctatus
ENSIPUG00000008750	srsf1b	78	92.708	ENSSPAG00000022562	-	78	92.708	Stegastes_partitus
ENSIPUG00000008750	srsf1b	80	86.603	ENSSPAG00000014152	-	81	85.646	Stegastes_partitus
ENSIPUG00000008750	srsf1b	100	95.968	ENSSSCG00000017626	-	100	95.968	Sus_scrofa
ENSIPUG00000008750	srsf1b	74	97.283	ENSTGUG00000008416	-	100	97.283	Taeniopygia_guttata
ENSIPUG00000008750	srsf1b	78	91.667	ENSTRUG00000003691	srsf1a	78	89.062	Takifugu_rubripes
ENSIPUG00000008750	srsf1b	80	90.256	ENSTNIG00000016223	srsf1a	77	89.062	Tetraodon_nigroviridis
ENSIPUG00000008750	srsf1b	75	90.217	ENSTBEG00000015378	-	63	92.935	Tupaia_belangeri
ENSIPUG00000008750	srsf1b	73	95.628	ENSTTRG00000007310	SRSF1	100	95.628	Tursiops_truncatus
ENSIPUG00000008750	srsf1b	100	95.968	ENSUAMG00000009858	SRSF1	100	95.968	Ursus_americanus
ENSIPUG00000008750	srsf1b	99	95.935	ENSUMAG00000000455	-	97	95.935	Ursus_maritimus
ENSIPUG00000008750	srsf1b	100	95.565	ENSVPAG00000010094	SRSF1	100	95.565	Vicugna_pacos
ENSIPUG00000008750	srsf1b	99	95.935	ENSVVUG00000011882	-	97	95.935	Vulpes_vulpes
ENSIPUG00000008750	srsf1b	100	94.737	ENSXETG00000008954	srsf1	100	89.888	Xenopus_tropicalis
ENSIPUG00000008750	srsf1b	78	92.188	ENSXMAG00000011766	srsf1a	78	89.583	Xiphophorus_maculatus