EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000008912 (Gene tree)
Gene ID: 108263535
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4886 bases
Position: chr3:22886731-22891616
Accession: 108263535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000013078	zf-C2H2	PF00096.26	2.1e-14	1	3
ENSIPUP00000013078	zf-C2H2	PF00096.26	2.1e-14	2	3
ENSIPUP00000013078	zf-C2H2	PF00096.26	2.1e-14	3	3
ENSIPUP00000013083	zf-C2H2	PF00096.26	2.4e-14	1	3
ENSIPUP00000013083	zf-C2H2	PF00096.26	2.4e-14	2	3
ENSIPUP00000013083	zf-C2H2	PF00096.26	2.4e-14	3	3
ENSIPUP00000013078	zf-met	PF12874.7	8.6e-07	1	1
ENSIPUP00000013083	zf-met	PF12874.7	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000013621	-	2546	XM_017464435	ENSIPUP00000013078	521 (aa)	XP_017319924	A0A2D0QNP1
ENSIPUT00000013626	-	2401	-	ENSIPUP00000013083	534 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000008912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008912	zbtb18	99	66.321	ENSAPOG00000005168	zbtb18	99	66.610	Acanthochromis_polyacanthus
ENSIPUG00000008912	zbtb18	99	69.646	ENSACIG00000008655	zbtb18	99	69.557	Amphilophus_citrinellus
ENSIPUG00000008912	zbtb18	99	66.321	ENSAOCG00000014105	zbtb18	100	66.107	Amphiprion_ocellaris
ENSIPUG00000008912	zbtb18	99	65.979	ENSAPEG00000003817	zbtb18	79	65.646	Amphiprion_percula
ENSIPUG00000008912	zbtb18	99	66.667	ENSATEG00000010192	zbtb18	99	67.126	Anabas_testudineus
ENSIPUG00000008912	zbtb18	99	65.913	ENSACLG00000022978	zbtb18	100	65.936	Astatotilapia_calliptera
ENSIPUG00000008912	zbtb18	100	77.838	ENSAMXG00000042119	zbtb18	100	78.378	Astyanax_mexicanus
ENSIPUG00000008912	zbtb18	99	66.781	ENSCSEG00000003083	zbtb18	100	66.105	Cynoglossus_semilaevis
ENSIPUG00000008912	zbtb18	100	65.816	ENSCVAG00000016785	zbtb18	100	66.105	Cyprinodon_variegatus
ENSIPUG00000008912	zbtb18	98	75.046	ENSDARG00000028228	zbtb18	100	76.330	Danio_rerio
ENSIPUG00000008912	zbtb18	100	71.964	ENSELUG00000013471	zbtb18	100	71.964	Esox_lucius
ENSIPUG00000008912	zbtb18	99	66.154	ENSFHEG00000020005	zbtb18	99	67.067	Fundulus_heteroclitus
ENSIPUG00000008912	zbtb18	61	93.130	ENSGMOG00000018718	zbtb18	56	88.636	Gadus_morhua
ENSIPUG00000008912	zbtb18	100	65.758	ENSGAFG00000000619	zbtb18	100	65.588	Gambusia_affinis
ENSIPUG00000008912	zbtb18	99	67.314	ENSGACG00000010518	zbtb18	96	67.491	Gasterosteus_aculeatus
ENSIPUG00000008912	zbtb18	99	65.972	ENSHBUG00000013654	zbtb18	99	66.437	Haplochromis_burtoni
ENSIPUG00000008912	zbtb18	64	79.558	ENSHCOG00000002345	zbtb18	94	94.545	Hippocampus_comes
ENSIPUG00000008912	zbtb18	100	65.690	ENSKMAG00000002780	zbtb18	100	66.838	Kryptolebias_marmoratus
ENSIPUG00000008912	zbtb18	99	66.724	ENSLBEG00000014796	zbtb18	99	66.724	Labrus_bergylta
ENSIPUG00000008912	zbtb18	84	62.151	ENSMFAG00000033326	ZBTB18	100	61.720	Macaca_fascicularis
ENSIPUG00000008912	zbtb18	83	62.609	ENSMMUG00000015664	ZBTB18	100	62.144	Macaca_mulatta
ENSIPUG00000008912	zbtb18	99	65.799	ENSMAMG00000021720	zbtb18	99	65.292	Mastacembelus_armatus
ENSIPUG00000008912	zbtb18	99	65.972	ENSMZEG00005027394	zbtb18	100	65.936	Maylandia_zebra
ENSIPUG00000008912	zbtb18	94	54.970	ENSMGAG00000015389	-	100	54.361	Meleagris_gallopavo
ENSIPUG00000008912	zbtb18	98	70.764	ENSMMOG00000007888	zbtb18	99	69.145	Mola_mola
ENSIPUG00000008912	zbtb18	99	67.657	ENSMALG00000000725	zbtb18	99	67.591	Monopterus_albus
ENSIPUG00000008912	zbtb18	98	66.081	ENSNBRG00000013796	zbtb18	100	66.551	Neolamprologus_brichardi
ENSIPUG00000008912	zbtb18	99	66.265	ENSONIG00000000862	zbtb18	99	66.609	Oreochromis_niloticus
ENSIPUG00000008912	zbtb18	99	65.808	ENSORLG00000027425	zbtb18	100	67.577	Oryzias_latipes
ENSIPUG00000008912	zbtb18	99	65.979	ENSORLG00020011988	zbtb18	100	66.610	Oryzias_latipes_hni
ENSIPUG00000008912	zbtb18	99	66.381	ENSORLG00015017457	zbtb18	100	66.610	Oryzias_latipes_hsok
ENSIPUG00000008912	zbtb18	99	66.087	ENSOMEG00000011249	zbtb18	100	66.948	Oryzias_melastigma
ENSIPUG00000008912	zbtb18	99	72.272	ENSPKIG00000021964	zbtb18	96	71.199	Paramormyrops_kingsleyae
ENSIPUG00000008912	zbtb18	98	58.614	ENSPKIG00000008787	-	100	58.614	Paramormyrops_kingsleyae
ENSIPUG00000008912	zbtb18	98	69.590	ENSPMGG00000008020	zbtb18	100	68.284	Periophthalmus_magnuspinnatus
ENSIPUG00000008912	zbtb18	98	65.913	ENSPFOG00000022080	zbtb18	100	66.140	Poecilia_formosa
ENSIPUG00000008912	zbtb18	98	69.759	ENSPLAG00000011299	-	100	67.897	Poecilia_latipinna
ENSIPUG00000008912	zbtb18	98	69.759	ENSPLAG00000020960	zbtb18	100	67.897	Poecilia_latipinna
ENSIPUG00000008912	zbtb18	98	65.976	ENSPMEG00000007554	zbtb18	100	65.565	Poecilia_mexicana
ENSIPUG00000008912	zbtb18	100	65.758	ENSPREG00000008576	zbtb18	100	64.566	Poecilia_reticulata
ENSIPUG00000008912	zbtb18	99	65.972	ENSPNYG00000001530	zbtb18	99	66.437	Pundamilia_nyererei
ENSIPUG00000008912	zbtb18	88	73.577	ENSPNAG00000014066	zbtb18	89	74.390	Pygocentrus_nattereri
ENSIPUG00000008912	zbtb18	98	66.960	ENSSMAG00000018041	zbtb18	100	67.311	Scophthalmus_maximus
ENSIPUG00000008912	zbtb18	98	66.432	ENSSDUG00000018660	zbtb18	100	66.725	Seriola_dumerili
ENSIPUG00000008912	zbtb18	98	66.608	ENSSLDG00000022573	zbtb18	100	66.899	Seriola_lalandi_dorsalis
ENSIPUG00000008912	zbtb18	94	53.663	ENSSPUG00000010554	-	100	53.069	Sphenodon_punctatus
ENSIPUG00000008912	zbtb18	99	65.921	ENSSPAG00000002691	zbtb18	99	66.093	Stegastes_partitus
ENSIPUG00000008912	zbtb18	98	67.838	ENSTRUG00000020604	zbtb18	100	67.770	Takifugu_rubripes
ENSIPUG00000008912	zbtb18	99	68.078	ENSTNIG00000000430	zbtb18	99	68.085	Tetraodon_nigroviridis
ENSIPUG00000008912	zbtb18	98	69.061	ENSXCOG00000013308	zbtb18	100	67.772	Xiphophorus_couchianus
ENSIPUG00000008912	zbtb18	99	68.704	ENSXMAG00000018241	zbtb18	99	66.851	Xiphophorus_maculatus