EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000008951 (Gene tree)
Gene ID: 108280187
Gene Symbol: RPP40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 10875 bases
Position: chr20:7475495-7486369
Accession: 108280187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000013134	Ribonuc_P_40	PF08584.11	2.6e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000013680	-	3051	XM_017495009	ENSIPUP00000013134	357 (aa)	XP_017350498	W5UEQ3

Gene Model

Click here to download ENSIPUG00000008951's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000008951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000008951	RPP40	99	48.056	ENSG00000124787	RPP40	99	48.056	Homo_sapiens
ENSIPUG00000008951	RPP40	89	38.679	ENSAPOG00000008660	rpp40	92	38.679	Acanthochromis_polyacanthus
ENSIPUG00000008951	RPP40	99	46.111	ENSAMEG00000012938	RPP40	99	46.111	Ailuropoda_melanoleuca
ENSIPUG00000008951	RPP40	99	45.787	ENSACIG00000003617	rpp40	99	45.787	Amphilophus_citrinellus
ENSIPUG00000008951	RPP40	100	47.632	ENSAOCG00000011846	rpp40	100	47.632	Amphiprion_ocellaris
ENSIPUG00000008951	RPP40	100	47.632	ENSAPEG00000001322	rpp40	100	47.632	Amphiprion_percula
ENSIPUG00000008951	RPP40	100	45.706	ENSATEG00000006584	rpp40	100	47.091	Anabas_testudineus
ENSIPUG00000008951	RPP40	84	48.525	ENSAPLG00000005691	RPP40	100	48.525	Anas_platyrhynchos
ENSIPUG00000008951	RPP40	99	48.596	ENSACAG00000006550	RPP40	87	48.596	Anolis_carolinensis
ENSIPUG00000008951	RPP40	99	46.389	ENSANAG00000029246	RPP40	99	46.389	Aotus_nancymaae
ENSIPUG00000008951	RPP40	97	47.714	ENSACLG00000015883	rpp40	96	47.714	Astatotilapia_calliptera
ENSIPUG00000008951	RPP40	100	67.598	ENSAMXG00000001755	rpp40	100	67.598	Astyanax_mexicanus
ENSIPUG00000008951	RPP40	99	46.667	ENSBTAG00000003332	RPP40	99	46.667	Bos_taurus
ENSIPUG00000008951	RPP40	99	46.667	ENSCJAG00000021373	RPP40	99	46.667	Callithrix_jacchus
ENSIPUG00000008951	RPP40	99	46.389	ENSCAFG00000009435	RPP40	99	46.389	Canis_familiaris
ENSIPUG00000008951	RPP40	99	46.389	ENSCAFG00020013380	RPP40	99	46.389	Canis_lupus_dingo
ENSIPUG00000008951	RPP40	99	47.075	ENSCHIG00000016849	RPP40	99	47.075	Capra_hircus
ENSIPUG00000008951	RPP40	99	46.667	ENSTSYG00000032857	RPP40	99	46.667	Carlito_syrichta
ENSIPUG00000008951	RPP40	89	41.121	ENSCAPG00000004957	RPP40	96	41.121	Cavia_aperea
ENSIPUG00000008951	RPP40	99	46.667	ENSCPOG00000005855	RPP40	99	46.667	Cavia_porcellus
ENSIPUG00000008951	RPP40	99	46.944	ENSCCAG00000019809	RPP40	99	46.944	Cebus_capucinus
ENSIPUG00000008951	RPP40	99	47.500	ENSCATG00000038787	RPP40	99	47.500	Cercocebus_atys
ENSIPUG00000008951	RPP40	99	46.389	ENSCLAG00000003235	RPP40	99	46.389	Chinchilla_lanigera
ENSIPUG00000008951	RPP40	99	47.778	ENSCSAG00000007307	RPP40	99	47.778	Chlorocebus_sabaeus
ENSIPUG00000008951	RPP40	54	58.333	ENSCHOG00000005856	-	77	58.333	Choloepus_hoffmanni
ENSIPUG00000008951	RPP40	99	49.444	ENSCPBG00000009003	RPP40	99	49.444	Chrysemys_picta_bellii
ENSIPUG00000008951	RPP40	99	47.500	ENSCANG00000033965	RPP40	99	47.500	Colobus_angolensis_palliatus
ENSIPUG00000008951	RPP40	98	46.328	ENSCGRG00001018328	Rpp40	98	46.328	Cricetulus_griseus_chok1gshd
ENSIPUG00000008951	RPP40	98	46.328	ENSCGRG00000011344	Rpp40	98	46.328	Cricetulus_griseus_crigri
ENSIPUG00000008951	RPP40	100	42.778	ENSCSEG00000015006	-	100	43.056	Cynoglossus_semilaevis
ENSIPUG00000008951	RPP40	75	40.072	ENSCVAG00000012169	rpp40	100	40.072	Cyprinodon_variegatus
ENSIPUG00000008951	RPP40	100	70.083	ENSDARG00000017605	rpp40	100	70.083	Danio_rerio
ENSIPUG00000008951	RPP40	81	44.898	ENSDNOG00000048136	RPP40	99	44.898	Dasypus_novemcinctus
ENSIPUG00000008951	RPP40	99	39.402	ENSDORG00000011196	-	99	39.402	Dipodomys_ordii
ENSIPUG00000008951	RPP40	99	46.260	ENSDORG00000029944	-	99	46.260	Dipodomys_ordii
ENSIPUG00000008951	RPP40	99	36.695	ENSETEG00000007458	RPP40	98	36.695	Echinops_telfairi
ENSIPUG00000008951	RPP40	99	43.175	ENSEBUG00000000386	rpp40	99	44.011	Eptatretus_burgeri
ENSIPUG00000008951	RPP40	99	46.779	ENSEASG00005012116	RPP40	79	46.779	Equus_asinus_asinus
ENSIPUG00000008951	RPP40	99	47.059	ENSECAG00000017247	RPP40	79	47.059	Equus_caballus
ENSIPUG00000008951	RPP40	80	37.024	ENSEEUG00000012087	RPP40	97	37.024	Erinaceus_europaeus
ENSIPUG00000008951	RPP40	100	65.651	ENSELUG00000017004	rpp40	100	65.651	Esox_lucius
ENSIPUG00000008951	RPP40	99	46.667	ENSFCAG00000009249	RPP40	99	46.667	Felis_catus
ENSIPUG00000008951	RPP40	87	48.930	ENSFALG00000013166	RPP40	100	48.930	Ficedula_albicollis
ENSIPUG00000008951	RPP40	80	39.519	ENSFDAG00000000265	-	99	39.519	Fukomys_damarensis
ENSIPUG00000008951	RPP40	99	46.111	ENSFDAG00000013001	-	99	46.111	Fukomys_damarensis
ENSIPUG00000008951	RPP40	100	46.797	ENSFHEG00000021429	rpp40	89	46.797	Fundulus_heteroclitus
ENSIPUG00000008951	RPP40	89	43.574	ENSGMOG00000018653	rpp40	100	43.574	Gadus_morhua
ENSIPUG00000008951	RPP40	99	47.911	ENSGALG00000036074	RPP40	99	47.911	Gallus_gallus
ENSIPUG00000008951	RPP40	84	37.874	ENSGAFG00000004189	-	100	37.874	Gambusia_affinis
ENSIPUG00000008951	RPP40	100	48.747	ENSGACG00000002472	rpp40	100	48.747	Gasterosteus_aculeatus
ENSIPUG00000008951	RPP40	99	49.444	ENSGAGG00000012918	RPP40	99	49.444	Gopherus_agassizii
ENSIPUG00000008951	RPP40	99	48.333	ENSGGOG00000013764	RPP40	99	48.333	Gorilla_gorilla
ENSIPUG00000008951	RPP40	91	44.545	ENSHBUG00000009378	rpp40	95	44.545	Haplochromis_burtoni
ENSIPUG00000008951	RPP40	99	46.944	ENSHGLG00000004871	RPP40	99	46.944	Heterocephalus_glaber_female
ENSIPUG00000008951	RPP40	99	46.944	ENSHGLG00100002080	RPP40	99	46.944	Heterocephalus_glaber_male
ENSIPUG00000008951	RPP40	96	40.698	ENSHCOG00000013264	-	92	40.698	Hippocampus_comes
ENSIPUG00000008951	RPP40	99	46.667	ENSSTOG00000011199	RPP40	99	46.667	Ictidomys_tridecemlineatus
ENSIPUG00000008951	RPP40	99	45.506	ENSJJAG00000020629	Rpp40	98	45.506	Jaculus_jaculus
ENSIPUG00000008951	RPP40	100	44.011	ENSKMAG00000019358	rpp40	100	44.011	Kryptolebias_marmoratus
ENSIPUG00000008951	RPP40	100	49.861	ENSLBEG00000022724	rpp40	100	49.861	Labrus_bergylta
ENSIPUG00000008951	RPP40	100	49.584	ENSLACG00000014848	RPP40	100	49.584	Latimeria_chalumnae
ENSIPUG00000008951	RPP40	100	57.064	ENSLOCG00000011650	rpp40	99	57.064	Lepisosteus_oculatus
ENSIPUG00000008951	RPP40	82	46.644	ENSLAFG00000007530	RPP40	98	46.644	Loxodonta_africana
ENSIPUG00000008951	RPP40	99	47.222	ENSMFAG00000043100	RPP40	99	47.222	Macaca_fascicularis
ENSIPUG00000008951	RPP40	99	47.500	ENSMMUG00000004966	RPP40	99	47.500	Macaca_mulatta
ENSIPUG00000008951	RPP40	99	47.222	ENSMNEG00000041986	RPP40	99	47.222	Macaca_nemestrina
ENSIPUG00000008951	RPP40	99	42.135	ENSMLEG00000040851	RPP40	99	52.096	Mandrillus_leucophaeus
ENSIPUG00000008951	RPP40	100	49.582	ENSMAMG00000019551	rpp40	99	49.582	Mastacembelus_armatus
ENSIPUG00000008951	RPP40	99	48.315	ENSMZEG00005019475	rpp40	99	48.315	Maylandia_zebra
ENSIPUG00000008951	RPP40	89	50.311	ENSMGAG00000004009	RPP40	89	50.311	Meleagris_gallopavo
ENSIPUG00000008951	RPP40	99	46.667	ENSMAUG00000010268	Rpp40	99	46.667	Mesocricetus_auratus
ENSIPUG00000008951	RPP40	99	48.333	ENSMICG00000003297	RPP40	99	45.404	Microcebus_murinus
ENSIPUG00000008951	RPP40	99	46.944	ENSMOCG00000000305	Rpp40	99	46.944	Microtus_ochrogaster
ENSIPUG00000008951	RPP40	100	40.997	ENSMMOG00000020591	-	100	40.997	Mola_mola
ENSIPUG00000008951	RPP40	99	48.476	ENSMODG00000009826	RPP40	99	48.476	Monodelphis_domestica
ENSIPUG00000008951	RPP40	100	49.582	ENSMALG00000020133	rpp40	100	49.582	Monopterus_albus
ENSIPUG00000008951	RPP40	99	47.222	MGP_CAROLIEiJ_G0018429	Rpp40	99	47.222	Mus_caroli
ENSIPUG00000008951	RPP40	99	46.944	ENSMUSG00000021418	Rpp40	99	46.944	Mus_musculus
ENSIPUG00000008951	RPP40	99	47.222	MGP_PahariEiJ_G0019497	Rpp40	99	47.222	Mus_pahari
ENSIPUG00000008951	RPP40	99	46.944	MGP_SPRETEiJ_G0019309	Rpp40	99	46.944	Mus_spretus
ENSIPUG00000008951	RPP40	99	46.944	ENSMPUG00000000530	RPP40	93	46.944	Mustela_putorius_furo
ENSIPUG00000008951	RPP40	99	47.500	ENSMLUG00000000501	RPP40	99	47.500	Myotis_lucifugus
ENSIPUG00000008951	RPP40	99	46.389	ENSNGAG00000023955	-	99	46.389	Nannospalax_galili
ENSIPUG00000008951	RPP40	95	43.402	ENSNGAG00000022529	-	99	43.402	Nannospalax_galili
ENSIPUG00000008951	RPP40	88	45.141	ENSNBRG00000017465	rpp40	86	44.892	Neolamprologus_brichardi
ENSIPUG00000008951	RPP40	99	47.778	ENSNLEG00000034397	RPP40	99	47.778	Nomascus_leucogenys
ENSIPUG00000008951	RPP40	99	43.454	ENSMEUG00000005300	RPP40	99	43.454	Notamacropus_eugenii
ENSIPUG00000008951	RPP40	99	43.889	ENSODEG00000018153	-	99	43.889	Octodon_degus
ENSIPUG00000008951	RPP40	100	46.537	ENSODEG00000007255	-	99	46.537	Octodon_degus
ENSIPUG00000008951	RPP40	89	43.302	ENSODEG00000006170	-	100	43.302	Octodon_degus
ENSIPUG00000008951	RPP40	99	48.034	ENSONIG00000014016	rpp40	99	48.034	Oreochromis_niloticus
ENSIPUG00000008951	RPP40	82	49.833	ENSOANG00000001200	RPP40	98	49.833	Ornithorhynchus_anatinus
ENSIPUG00000008951	RPP40	98	44.789	ENSOCUG00000000354	RPP40	98	44.789	Oryctolagus_cuniculus
ENSIPUG00000008951	RPP40	99	45.531	ENSORLG00000008242	-	100	45.531	Oryzias_latipes
ENSIPUG00000008951	RPP40	99	45.251	ENSORLG00020013745	-	91	45.251	Oryzias_latipes_hni
ENSIPUG00000008951	RPP40	99	44.972	ENSORLG00015000887	-	100	44.972	Oryzias_latipes_hsok
ENSIPUG00000008951	RPP40	99	47.486	ENSOMEG00000002747	rpp40	100	47.486	Oryzias_melastigma
ENSIPUG00000008951	RPP40	99	46.944	ENSOGAG00000006055	RPP40	99	46.944	Otolemur_garnettii
ENSIPUG00000008951	RPP40	89	45.988	ENSOARG00000018783	RPP40	99	46.667	Ovis_aries
ENSIPUG00000008951	RPP40	99	48.333	ENSPPAG00000023703	RPP40	99	48.333	Pan_paniscus
ENSIPUG00000008951	RPP40	99	46.389	ENSPPRG00000005612	RPP40	99	46.389	Panthera_pardus
ENSIPUG00000008951	RPP40	99	44.321	ENSPTIG00000018847	RPP40	99	44.321	Panthera_tigris_altaica
ENSIPUG00000008951	RPP40	99	48.056	ENSPTRG00000017690	RPP40	99	48.056	Pan_troglodytes
ENSIPUG00000008951	RPP40	99	46.944	ENSPANG00000017865	RPP40	99	46.944	Papio_anubis
ENSIPUG00000008951	RPP40	100	58.449	ENSPKIG00000006311	rpp40	100	58.726	Paramormyrops_kingsleyae
ENSIPUG00000008951	RPP40	62	49.099	ENSPSIG00000007854	RPP40	100	49.099	Pelodiscus_sinensis
ENSIPUG00000008951	RPP40	93	40.299	ENSPEMG00000020809	Rpp40	91	40.299	Peromyscus_maniculatus_bairdii
ENSIPUG00000008951	RPP40	76	44.245	ENSPMAG00000008412	rpp40	99	44.245	Petromyzon_marinus
ENSIPUG00000008951	RPP40	99	48.333	ENSPCIG00000010682	RPP40	99	48.333	Phascolarctos_cinereus
ENSIPUG00000008951	RPP40	100	41.828	ENSPFOG00000011460	rpp40	99	41.828	Poecilia_formosa
ENSIPUG00000008951	RPP40	100	41.783	ENSPLAG00000001334	rpp40	100	41.783	Poecilia_latipinna
ENSIPUG00000008951	RPP40	100	42.618	ENSPMEG00000007721	rpp40	100	42.618	Poecilia_mexicana
ENSIPUG00000008951	RPP40	100	42.897	ENSPREG00000009215	rpp40	100	42.897	Poecilia_reticulata
ENSIPUG00000008951	RPP40	99	48.056	ENSPPYG00000016194	RPP40	99	48.056	Pongo_abelii
ENSIPUG00000008951	RPP40	50	46.369	ENSPCAG00000002700	-	96	46.369	Procavia_capensis
ENSIPUG00000008951	RPP40	99	46.389	ENSPCOG00000003907	RPP40	99	46.389	Propithecus_coquereli
ENSIPUG00000008951	RPP40	99	46.667	ENSPVAG00000011325	RPP40	99	46.667	Pteropus_vampyrus
ENSIPUG00000008951	RPP40	84	44.667	ENSPNYG00000004432	rpp40	100	44.667	Pundamilia_nyererei
ENSIPUG00000008951	RPP40	100	72.853	ENSPNAG00000019125	rpp40	100	72.853	Pygocentrus_nattereri
ENSIPUG00000008951	RPP40	99	46.944	ENSRNOG00000016226	Rpp40	99	46.944	Rattus_norvegicus
ENSIPUG00000008951	RPP40	99	47.222	ENSRBIG00000035800	RPP40	99	47.222	Rhinopithecus_bieti
ENSIPUG00000008951	RPP40	99	47.222	ENSRROG00000039116	RPP40	99	47.222	Rhinopithecus_roxellana
ENSIPUG00000008951	RPP40	99	46.111	ENSSBOG00000020297	RPP40	99	46.111	Saimiri_boliviensis_boliviensis
ENSIPUG00000008951	RPP40	76	50.730	ENSSHAG00000002102	RPP40	99	50.730	Sarcophilus_harrisii
ENSIPUG00000008951	RPP40	100	59.116	ENSSFOG00015001142	rpp40	81	59.116	Scleropages_formosus
ENSIPUG00000008951	RPP40	100	50.418	ENSSDUG00000007202	rpp40	100	50.418	Seriola_dumerili
ENSIPUG00000008951	RPP40	100	50.139	ENSSLDG00000017563	rpp40	100	50.139	Seriola_lalandi_dorsalis
ENSIPUG00000008951	RPP40	82	46.780	ENSSPUG00000018950	-	100	46.780	Sphenodon_punctatus
ENSIPUG00000008951	RPP40	99	48.333	ENSSPUG00000017487	-	99	48.333	Sphenodon_punctatus
ENSIPUG00000008951	RPP40	100	47.911	ENSSPAG00000022716	rpp40	100	47.911	Stegastes_partitus
ENSIPUG00000008951	RPP40	99	47.339	ENSSSCG00000000998	RPP40	99	47.176	Sus_scrofa
ENSIPUG00000008951	RPP40	99	50.700	ENSTGUG00000002258	-	99	50.700	Taeniopygia_guttata
ENSIPUG00000008951	RPP40	99	47.887	ENSTRUG00000003755	rpp40	99	47.887	Takifugu_rubripes
ENSIPUG00000008951	RPP40	100	46.518	ENSTNIG00000003077	rpp40	100	46.518	Tetraodon_nigroviridis
ENSIPUG00000008951	RPP40	69	35.600	ENSTBEG00000014467	-	73	35.600	Tupaia_belangeri
ENSIPUG00000008951	RPP40	100	42.382	ENSTTRG00000007319	RPP40	99	42.382	Tursiops_truncatus
ENSIPUG00000008951	RPP40	99	46.111	ENSUAMG00000002159	RPP40	99	49.383	Ursus_americanus
ENSIPUG00000008951	RPP40	99	46.111	ENSUMAG00000018639	RPP40	93	46.111	Ursus_maritimus
ENSIPUG00000008951	RPP40	71	34.375	ENSVPAG00000004652	-	89	34.375	Vicugna_pacos
ENSIPUG00000008951	RPP40	99	46.111	ENSVVUG00000005451	RPP40	99	46.111	Vulpes_vulpes
ENSIPUG00000008951	RPP40	100	48.209	ENSXETG00000017617	rpp40	100	47.253	Xenopus_tropicalis
ENSIPUG00000008951	RPP40	54	44.340	ENSXCOG00000019991	-	59	43.925	Xiphophorus_couchianus
ENSIPUG00000008951	RPP40	100	35.014	ENSXMAG00000024940	rpp40	99	35.014	Xiphophorus_maculatus