EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000009077 (Gene tree)
Gene ID
108273175
Gene Symbol
u2af2
Alias
wu:fb73g02|zgc:77804
Full Name
U2 small nuclear RNA auxiliary factor 2
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
14973 bases
Position
chr12:15023815-15038787
Accession
108273175
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000013367RRM_1PF00076.221.5e-3413
ENSIPUP00000013367RRM_1PF00076.221.5e-3423
ENSIPUP00000013367RRM_1PF00076.221.5e-3433
ENSIPUP00000013352RRM_1PF00076.221.8e-3413
ENSIPUP00000013352RRM_1PF00076.221.8e-3423
ENSIPUP00000013352RRM_1PF00076.221.8e-3433
ENSIPUP00000013336RRM_1PF00076.222e-3413
ENSIPUP00000013336RRM_1PF00076.222e-3423
ENSIPUP00000013336RRM_1PF00076.222e-3433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000013914-4146-ENSIPUP00000013352482 (aa)--
ENSIPUT00000013898-4167-ENSIPUP00000013336489 (aa)--
ENSIPUT00000013930-4089XM_017482247ENSIPUP00000013367463 (aa)XP_017337736A0A2D0S5M5
Gene Model
Click here to download ENSIPUG00000009077's gene model file
Pathways
Pathway IDPathway NameSource
ipu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009077's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000009077u2af29973.434ENSIPUG00000009844-10071.212
ENSIPUG00000009077u2af27236.275ENSIPUG00000002453puf60a6236.275
ENSIPUG00000009077u2af29986.966ENSIPUG00000007717u2af2a9987.607
ENSIPUG00000009077u2af26538.235ENSIPUG00000004660puf60b5338.235
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000009077u2af29984.519ENSG00000063244U2AF29795.181Homo_sapiens
ENSIPUG00000009077u2af26988.922ENSAPOG00000023155u2af2a9990.712Acanthochromis_polyacanthus
ENSIPUG00000009077u2af29972.708ENSAPOG00000002208-10072.708Acanthochromis_polyacanthus
ENSIPUG00000009077u2af27889.197ENSAMEG00000003864U2AF28591.143Ailuropoda_melanoleuca
ENSIPUG00000009077u2af28496.144ENSACIG00000005749u2af2a9195.918Amphilophus_citrinellus
ENSIPUG00000009077u2af29572.570ENSACIG00000014173-8678.803Amphilophus_citrinellus
ENSIPUG00000009077u2af29972.708ENSAOCG00000003595-10072.708Amphiprion_ocellaris
ENSIPUG00000009077u2af29992.241ENSAOCG00000015571u2af2a10092.457Amphiprion_ocellaris
ENSIPUG00000009077u2af29573.894ENSAPEG00000020062-8480.612Amphiprion_percula
ENSIPUG00000009077u2af28496.401ENSAPEG00000009376u2af2a9296.173Amphiprion_percula
ENSIPUG00000009077u2af29989.706ENSATEG00000022332u2af2a9988.445Anabas_testudineus
ENSIPUG00000009077u2af29574.229ENSATEG00000020577-8581.122Anabas_testudineus
ENSIPUG00000009077u2af29986.134ENSACAG00000015489U2AF29986.345Anolis_carolinensis
ENSIPUG00000009077u2af29982.787ENSANAG00000028042U2AF29984.153Aotus_nancymaae
ENSIPUG00000009077u2af29988.866ENSACLG00000022181u2af2a9988.445Astatotilapia_calliptera
ENSIPUG00000009077u2af29972.708ENSACLG00000020793-10072.708Astatotilapia_calliptera
ENSIPUG00000009077u2af29988.632ENSAMXG00000033347u2af2a9989.263Astyanax_mexicanus
ENSIPUG00000009077u2af210095.680ENSAMXG00000039454u2af2b10095.680Astyanax_mexicanus
ENSIPUG00000009077u2af29987.689ENSBTAG00000002830U2AF29987.905Bos_taurus
ENSIPUG00000009077u2af28658.396WBGene00006697uaf-110053.691Caenorhabditis_elegans
ENSIPUG00000009077u2af29984.025ENSCJAG00000017128U2AF29985.062Callithrix_jacchus
ENSIPUG00000009077u2af29984.519ENSCAFG00000002551U2AF29985.565Canis_familiaris
ENSIPUG00000009077u2af28591.980ENSCAFG00020015445U2AF28391.919Canis_lupus_dingo
ENSIPUG00000009077u2af28577.114ENSCHIG00000023595U2AF28677.193Capra_hircus
ENSIPUG00000009077u2af29984.025ENSTSYG00000007432U2AF29985.062Carlito_syrichta
ENSIPUG00000009077u2af28790.172ENSCAPG00000008466U2AF28691.919Cavia_aperea
ENSIPUG00000009077u2af29984.025ENSCPOG00000001582U2AF29985.062Cavia_porcellus
ENSIPUG00000009077u2af29984.025ENSCCAG00000023336U2AF29985.062Cebus_capucinus
ENSIPUG00000009077u2af29984.519ENSCATG00000004637U2AF29985.565Cercocebus_atys
ENSIPUG00000009077u2af29984.519ENSCLAG00000000596U2AF29985.565Chinchilla_lanigera
ENSIPUG00000009077u2af29984.519ENSCSAG00000001722U2AF29985.565Chlorocebus_sabaeus
ENSIPUG00000009077u2af28490.932ENSCPBG00000004485U2AF29992.182Chrysemys_picta_bellii
ENSIPUG00000009077u2af28469.643ENSCING00000003455-8069.643Ciona_intestinalis
ENSIPUG00000009077u2af28468.895ENSCSAVG00000006813-8566.919Ciona_savignyi
ENSIPUG00000009077u2af29183.716ENSCANG00000031002-9684.862Colobus_angolensis_palliatus
ENSIPUG00000009077u2af29978.407ENSCANG00000043845-9980.503Colobus_angolensis_palliatus
ENSIPUG00000009077u2af29976.891ENSCGRG00001007486-9975.906Cricetulus_griseus_chok1gshd
ENSIPUG00000009077u2af29987.905ENSCGRG00001003185-9988.121Cricetulus_griseus_chok1gshd
ENSIPUG00000009077u2af25090.909ENSCGRG00000004524-7986.939Cricetulus_griseus_crigri
ENSIPUG00000009077u2af29976.891ENSCGRG00000018587-9975.906Cricetulus_griseus_crigri
ENSIPUG00000009077u2af29971.368ENSCSEG00000020504-9469.593Cynoglossus_semilaevis
ENSIPUG00000009077u2af27191.720ENSCSEG00000018709u2af2a8191.720Cynoglossus_semilaevis
ENSIPUG00000009077u2af29972.708ENSCVAG00000023307-10072.708Cyprinodon_variegatus
ENSIPUG00000009077u2af29991.595ENSCVAG00000001259u2af2a9991.810Cyprinodon_variegatus
ENSIPUG00000009077u2af29991.139ENSDARG00000011740u2af2b9991.139Danio_rerio
ENSIPUG00000009077u2af29988.936ENSDARG00000012505u2af2a9989.574Danio_rerio
ENSIPUG00000009077u2af29183.716ENSDNOG00000047039U2AF29684.862Dasypus_novemcinctus
ENSIPUG00000009077u2af29984.025ENSDORG00000003250U2af29985.062Dipodomys_ordii
ENSIPUG00000009077u2af28470.408FBgn0005411U2af5010070.161Drosophila_melanogaster
ENSIPUG00000009077u2af29149.888FBgn0034834LS28552.513Drosophila_melanogaster
ENSIPUG00000009077u2af28974.341ENSEBUG00000010917U2AF210065.696Eptatretus_burgeri
ENSIPUG00000009077u2af28263.158ENSEBUG00000001732U2AF28463.255Eptatretus_burgeri
ENSIPUG00000009077u2af28691.294ENSEASG00005020708U2AF27891.919Equus_asinus_asinus
ENSIPUG00000009077u2af29987.905ENSECAG00000010110U2AF29988.121Equus_caballus
ENSIPUG00000009077u2af29971.967ENSELUG00000018459-10071.429Esox_lucius
ENSIPUG00000009077u2af29986.777ENSELUG00000015850u2af2a9987.860Esox_lucius
ENSIPUG00000009077u2af29985.622ENSELUG00000022291u2af2b9983.691Esox_lucius
ENSIPUG00000009077u2af29984.025ENSFCAG00000011504U2AF29985.062Felis_catus
ENSIPUG00000009077u2af28790.172ENSFDAG00000011264U2AF28391.919Fukomys_damarensis
ENSIPUG00000009077u2af29991.595ENSFHEG00000016025u2af2a9991.810Fundulus_heteroclitus
ENSIPUG00000009077u2af29988.627ENSGMOG00000004535u2af2a9990.343Gadus_morhua
ENSIPUG00000009077u2af29886.022ENSGALG00000052748U2AF26586.237Gallus_gallus
ENSIPUG00000009077u2af29991.595ENSGAFG00000013626u2af2a8891.810Gambusia_affinis
ENSIPUG00000009077u2af29973.774ENSGAFG00000005628-10072.944Gambusia_affinis
ENSIPUG00000009077u2af29970.921ENSGACG00000014500-10071.097Gasterosteus_aculeatus
ENSIPUG00000009077u2af29991.398ENSGACG00000010632U2AF29991.613Gasterosteus_aculeatus
ENSIPUG00000009077u2af26692.182ENSGAGG00000011849U2AF29992.182Gopherus_agassizii
ENSIPUG00000009077u2af25680.934ENSGGOG00000036399-9484.362Gorilla_gorilla
ENSIPUG00000009077u2af29972.708ENSHBUG00000017424-10072.708Haplochromis_burtoni
ENSIPUG00000009077u2af29988.866ENSHBUG00000013935u2af2a9988.445Haplochromis_burtoni
ENSIPUG00000009077u2af29984.025ENSHGLG00000005889U2AF29985.062Heterocephalus_glaber_female
ENSIPUG00000009077u2af28790.172ENSHGLG00100004757U2AF28691.919Heterocephalus_glaber_male
ENSIPUG00000009077u2af29988.960ENSHCOG00000019367u2af2a9989.597Hippocampus_comes
ENSIPUG00000009077u2af29984.025ENSSTOG00000019595U2AF29985.062Ictidomys_tridecemlineatus
ENSIPUG00000009077u2af29984.025ENSJJAG00000017705U2af29985.062Jaculus_jaculus
ENSIPUG00000009077u2af29592.955ENSKMAG00000005960u2af2a9987.605Kryptolebias_marmoratus
ENSIPUG00000009077u2af29992.241ENSLBEG00000016162u2af2a9992.457Labrus_bergylta
ENSIPUG00000009077u2af29572.103ENSLBEG00000005001-8678.554Labrus_bergylta
ENSIPUG00000009077u2af27992.643ENSLACG00000001648U2AF29992.643Latimeria_chalumnae
ENSIPUG00000009077u2af26094.565ENSLOCG00000008050u2af2b7994.565Lepisosteus_oculatus
ENSIPUG00000009077u2af29972.327ENSLOCG00000010843-10072.495Lepisosteus_oculatus
ENSIPUG00000009077u2af29985.356ENSLAFG00000018056-9985.565Loxodonta_africana
ENSIPUG00000009077u2af29975.992ENSLAFG00000028496-9974.098Loxodonta_africana
ENSIPUG00000009077u2af29984.025ENSMFAG00000038383U2AF29985.062Macaca_fascicularis
ENSIPUG00000009077u2af29983.817ENSMMUG00000004810U2AF29984.855Macaca_mulatta
ENSIPUG00000009077u2af29984.519ENSMNEG00000042096U2AF29985.565Macaca_nemestrina
ENSIPUG00000009077u2af28790.819ENSMLEG00000032219U2AF27692.602Mandrillus_leucophaeus
ENSIPUG00000009077u2af29971.429ENSMAMG00000020158-10071.429Mastacembelus_armatus
ENSIPUG00000009077u2af29991.064ENSMAMG00000019817u2af2a9991.064Mastacembelus_armatus
ENSIPUG00000009077u2af29972.708ENSMZEG00005023318-10072.708Maylandia_zebra
ENSIPUG00000009077u2af29992.026ENSMZEG00005016563u2af2a9992.241Maylandia_zebra
ENSIPUG00000009077u2af28790.172ENSMAUG00000008180U2af28491.919Mesocricetus_auratus
ENSIPUG00000009077u2af29984.519ENSMICG00000027681U2AF29985.565Microcebus_murinus
ENSIPUG00000009077u2af26689.251ENSMOCG00000001018-9989.251Microtus_ochrogaster
ENSIPUG00000009077u2af29984.025ENSMOCG00000013214-9985.062Microtus_ochrogaster
ENSIPUG00000009077u2af29977.987ENSMOCG00000007227-9977.215Microtus_ochrogaster
ENSIPUG00000009077u2af28796.020ENSMMOG00000016600u2af2a9095.918Mola_mola
ENSIPUG00000009077u2af29967.437ENSMMOG00000000531-10068.277Mola_mola
ENSIPUG00000009077u2af29992.026ENSMALG00000009985u2af2a9992.026Monopterus_albus
ENSIPUG00000009077u2af29984.519MGP_CAROLIEiJ_G0029150U2af29985.565Mus_caroli
ENSIPUG00000009077u2af29984.519ENSMUSG00000030435U2af29992.182Mus_musculus
ENSIPUG00000009077u2af29984.519MGP_PahariEiJ_G0021017U2af29985.565Mus_pahari
ENSIPUG00000009077u2af29984.519MGP_SPRETEiJ_G0030203U2af29985.565Mus_spretus
ENSIPUG00000009077u2af29984.519ENSMPUG00000007135U2AF29985.565Mustela_putorius_furo
ENSIPUG00000009077u2af25185.892ENSMLUG00000011051-9985.892Myotis_lucifugus
ENSIPUG00000009077u2af29984.025ENSNGAG00000020369U2af29985.062Nannospalax_galili
ENSIPUG00000009077u2af29572.570ENSNBRG00000011100-8679.052Neolamprologus_brichardi
ENSIPUG00000009077u2af29988.866ENSNBRG00000002568u2af2a9988.445Neolamprologus_brichardi
ENSIPUG00000009077u2af29973.987ENSNLEG00000010562U2AF29992.182Nomascus_leucogenys
ENSIPUG00000009077u2af28579.082ENSMEUG00000002346U2AF28679.082Notamacropus_eugenii
ENSIPUG00000009077u2af29863.239ENSODEG00000009254-9961.588Octodon_degus
ENSIPUG00000009077u2af29979.253ENSODEG00000012729-9980.290Octodon_degus
ENSIPUG00000009077u2af29987.474ENSONIG00000012793u2af2a9985.835Oreochromis_niloticus
ENSIPUG00000009077u2af29972.708ENSONIG00000009682-10072.708Oreochromis_niloticus
ENSIPUG00000009077u2af29988.679ENSORLG00000011545u2af2a9986.596Oryzias_latipes
ENSIPUG00000009077u2af29988.679ENSORLG00020006941u2af2a9986.596Oryzias_latipes_hni
ENSIPUG00000009077u2af29988.679ENSORLG00015012843u2af2a9986.596Oryzias_latipes_hsok
ENSIPUG00000009077u2af29988.235ENSOMEG00000011386u2af2a9988.025Oryzias_melastigma
ENSIPUG00000009077u2af29751.143ENSOGAG00000034729-7861.475Otolemur_garnettii
ENSIPUG00000009077u2af29984.025ENSOGAG00000007206-9985.062Otolemur_garnettii
ENSIPUG00000009077u2af29976.299ENSOARG00000001091U2AF29975.726Ovis_aries
ENSIPUG00000009077u2af29984.025ENSPPAG00000039782U2AF29985.062Pan_paniscus
ENSIPUG00000009077u2af29984.025ENSPPRG00000013843U2AF29985.062Panthera_pardus
ENSIPUG00000009077u2af29578.855ENSPTIG00000005489U2AF28685.894Panthera_tigris_altaica
ENSIPUG00000009077u2af29984.025ENSPTRG00000011523U2AF29992.182Pan_troglodytes
ENSIPUG00000009077u2af29984.519ENSPANG00000008459U2AF29985.565Papio_anubis
ENSIPUG00000009077u2af29973.830ENSPKIG00000014878-10072.495Paramormyrops_kingsleyae
ENSIPUG00000009077u2af29990.526ENSPKIG00000024346u2af2b9094.898Paramormyrops_kingsleyae
ENSIPUG00000009077u2af28570.732ENSPSIG00000008014U2AF28670.516Pelodiscus_sinensis
ENSIPUG00000009077u2af29586.607ENSPMGG00000022980u2af2a8988.250Periophthalmus_magnuspinnatus
ENSIPUG00000009077u2af29984.025ENSPEMG00000007378U2af29992.182Peromyscus_maniculatus_bairdii
ENSIPUG00000009077u2af28276.104ENSPMAG00000004097u2af2a9173.986Petromyzon_marinus
ENSIPUG00000009077u2af29984.232ENSPCIG00000018013U2AF29985.270Phascolarctos_cinereus
ENSIPUG00000009077u2af29974.298ENSPFOG00000006433-10073.160Poecilia_formosa
ENSIPUG00000009077u2af29988.445ENSPFOG00000010799u2af2a10088.025Poecilia_formosa
ENSIPUG00000009077u2af29991.595ENSPLAG00000014365u2af2a9991.810Poecilia_latipinna
ENSIPUG00000009077u2af28680.605ENSPLAG00000003275-8680.867Poecilia_latipinna
ENSIPUG00000009077u2af28680.353ENSPMEG00000003734-8680.612Poecilia_mexicana
ENSIPUG00000009077u2af29991.595ENSPMEG00000002969u2af2a9991.810Poecilia_mexicana
ENSIPUG00000009077u2af29593.409ENSPREG00000008739u2af2a9988.025Poecilia_reticulata
ENSIPUG00000009077u2af29972.495ENSPREG00000013036-10075.168Poecilia_reticulata
ENSIPUG00000009077u2af25989.568ENSPPYG00000010429-7889.568Pongo_abelii
ENSIPUG00000009077u2af28577.863ENSPCAG00000003709-9379.003Procavia_capensis
ENSIPUG00000009077u2af29967.909ENSPCAG00000014399-9968.944Procavia_capensis
ENSIPUG00000009077u2af29984.025ENSPCOG00000025870U2AF29985.062Propithecus_coquereli
ENSIPUG00000009077u2af29983.610ENSPVAG00000004540U2AF29984.647Pteropus_vampyrus
ENSIPUG00000009077u2af29988.866ENSPNYG00000001438u2af2a9988.445Pundamilia_nyererei
ENSIPUG00000009077u2af29972.708ENSPNYG00000011605-10072.708Pundamilia_nyererei
ENSIPUG00000009077u2af29971.639ENSPNAG00000007182-10072.281Pygocentrus_nattereri
ENSIPUG00000009077u2af210095.896ENSPNAG00000027289u2af2b10095.896Pygocentrus_nattereri
ENSIPUG00000009077u2af29989.530ENSPNAG00000017620u2af2a9990.385Pygocentrus_nattereri
ENSIPUG00000009077u2af29984.519ENSRNOG00000015914U2af29985.565Rattus_norvegicus
ENSIPUG00000009077u2af29983.817ENSRBIG00000041018U2AF29984.855Rhinopithecus_bieti
ENSIPUG00000009077u2af28386.788ENSRROG00000031103-8592.068Rhinopithecus_roxellana
ENSIPUG00000009077u2af29978.870ENSRROG00000031238-9980.753Rhinopithecus_roxellana
ENSIPUG00000009077u2af29984.519ENSSBOG00000023891U2AF29985.565Saimiri_boliviensis_boliviensis
ENSIPUG00000009077u2af25279.371ENSSHAG00000001167U2AF26579.787Sarcophilus_harrisii
ENSIPUG00000009077u2af28694.221ENSSFOG00015019182u2af2b8894.643Scleropages_formosus
ENSIPUG00000009077u2af29973.222ENSSFOG00015003884-9380.357Scleropages_formosus
ENSIPUG00000009077u2af29972.281ENSSMAG00000013779-10072.281Scophthalmus_maximus
ENSIPUG00000009077u2af29991.828ENSSMAG00000012582u2af2a9992.258Scophthalmus_maximus
ENSIPUG00000009077u2af29992.026ENSSDUG00000009457u2af2a10092.241Seriola_dumerili
ENSIPUG00000009077u2af29870.417ENSSDUG00000021434-8278.660Seriola_dumerili
ENSIPUG00000009077u2af29992.026ENSSLDG00000022742u2af2a9992.241Seriola_lalandi_dorsalis
ENSIPUG00000009077u2af29572.258ENSSLDG00000016151-8678.660Seriola_lalandi_dorsalis
ENSIPUG00000009077u2af29985.031ENSSPUG00000010229U2AF29985.239Sphenodon_punctatus
ENSIPUG00000009077u2af29593.878ENSSPAG00000022519u2af2a9988.655Stegastes_partitus
ENSIPUG00000009077u2af29972.921ENSSPAG00000005241-10072.921Stegastes_partitus
ENSIPUG00000009077u2af29987.905ENSSSCG00000034815U2AF29988.121Sus_scrofa
ENSIPUG00000009077u2af29591.383ENSTRUG00000005514u2af2a8793.367Takifugu_rubripes
ENSIPUG00000009077u2af29989.684ENSTNIG00000008106U2AF29988.632Tetraodon_nigroviridis
ENSIPUG00000009077u2af29968.994ENSTNIG00000011257-10071.490Tetraodon_nigroviridis
ENSIPUG00000009077u2af27885.479ENSTBEG00000009104U2AF29587.288Tupaia_belangeri
ENSIPUG00000009077u2af29984.025ENSTTRG00000000987U2AF29985.062Tursiops_truncatus
ENSIPUG00000009077u2af28591.960ENSUAMG00000019883U2AF28791.919Ursus_americanus
ENSIPUG00000009077u2af28591.960ENSUMAG00000024586U2AF29992.182Ursus_maritimus
ENSIPUG00000009077u2af28790.819ENSVVUG00000006956U2AF25992.602Vulpes_vulpes
ENSIPUG00000009077u2af29987.076ENSXETG00000019128u2af29986.653Xenopus_tropicalis
ENSIPUG00000009077u2af29493.394ENSXCOG00000019406u2af2a8995.663Xiphophorus_couchianus
ENSIPUG00000009077u2af29991.595ENSXMAG00000011979u2af2a9991.810Xiphophorus_maculatus
ENSIPUG00000009077u2af29971.882ENSXMAG00000000768-9672.495Xiphophorus_maculatus

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