EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000009113 (Gene tree)
Gene ID: 108280057
Gene Symbol: -
Alias: -
Full Name: transcriptional protein SWT1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 33785 bases
Position: chr2:32547230-32581014
Accession: 108280057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000013338	PIN_4	PF13638.6	2.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000013900	-	6242	XM_017494811	ENSIPUP00000013338	957 (aa)	XP_017350300	-

Gene Model

Click here to download ENSIPUG00000009113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009113's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009113	-	69	33.869	ENSG00000116668	SWT1	73	33.869	Homo_sapiens
ENSIPUG00000009113	-	96	35.193	ENSAPOG00000014897	-	59	46.261	Acanthochromis_polyacanthus
ENSIPUG00000009113	-	69	34.593	ENSAMEG00000013585	SWT1	62	37.671	Ailuropoda_melanoleuca
ENSIPUG00000009113	-	71	41.821	ENSAPEG00000009613	-	81	38.813	Amphiprion_percula
ENSIPUG00000009113	-	57	49.117	ENSATEG00000018946	swt1	58	49.117	Anabas_testudineus
ENSIPUG00000009113	-	57	37.543	ENSAPLG00000008607	SWT1	76	37.088	Anas_platyrhynchos
ENSIPUG00000009113	-	59	35.911	ENSACAG00000002276	SWT1	66	35.911	Anolis_carolinensis
ENSIPUG00000009113	-	69	33.579	ENSANAG00000027068	SWT1	73	33.432	Aotus_nancymaae
ENSIPUG00000009113	-	54	46.055	ENSACLG00000009742	swt1	67	46.055	Astatotilapia_calliptera
ENSIPUG00000009113	-	88	52.247	ENSAMXG00000010971	swt1	83	54.963	Astyanax_mexicanus
ENSIPUG00000009113	-	58	36.379	ENSCAFG00000013543	SWT1	62	36.379	Canis_familiaris
ENSIPUG00000009113	-	58	36.301	ENSCAFG00020015648	SWT1	66	36.379	Canis_lupus_dingo
ENSIPUG00000009113	-	58	36.878	ENSCHIG00000023511	SWT1	96	36.177	Capra_hircus
ENSIPUG00000009113	-	58	36.207	ENSTSYG00000010470	SWT1	63	36.210	Carlito_syrichta
ENSIPUG00000009113	-	64	33.489	ENSCPOG00000014251	SWT1	77	33.489	Cavia_porcellus
ENSIPUG00000009113	-	69	33.918	ENSCCAG00000033926	SWT1	73	33.724	Cebus_capucinus
ENSIPUG00000009113	-	69	33.819	ENSCATG00000042210	SWT1	96	36.269	Cercocebus_atys
ENSIPUG00000009113	-	70	34.188	ENSCLAG00000013959	SWT1	76	33.903	Chinchilla_lanigera
ENSIPUG00000009113	-	69	33.869	ENSCSAG00000012895	SWT1	73	33.869	Chlorocebus_sabaeus
ENSIPUG00000009113	-	58	38.370	ENSCPBG00000015691	SWT1	62	38.370	Chrysemys_picta_bellii
ENSIPUG00000009113	-	69	33.772	ENSCANG00000032207	SWT1	96	36.000	Colobus_angolensis_palliatus
ENSIPUG00000009113	-	69	34.904	ENSCGRG00001022955	Swt1	73	34.757	Cricetulus_griseus_chok1gshd
ENSIPUG00000009113	-	69	34.643	ENSCGRG00000010224	Swt1	74	34.498	Cricetulus_griseus_crigri
ENSIPUG00000009113	-	58	43.707	ENSCSEG00000017352	swt1	75	44.218	Cynoglossus_semilaevis
ENSIPUG00000009113	-	82	47.877	ENSDARG00000094010	swt1	82	49.127	Danio_rerio
ENSIPUG00000009113	-	61	33.868	ENSDNOG00000005254	SWT1	59	36.673	Dasypus_novemcinctus
ENSIPUG00000009113	-	69	34.257	ENSDORG00000010531	Swt1	79	33.577	Dipodomys_ordii
ENSIPUG00000009113	-	69	33.807	ENSEASG00005005530	SWT1	78	33.768	Equus_asinus_asinus
ENSIPUG00000009113	-	69	33.141	ENSECAG00000012085	SWT1	78	33.088	Equus_caballus
ENSIPUG00000009113	-	81	44.702	ENSELUG00000020565	swt1	77	44.689	Esox_lucius
ENSIPUG00000009113	-	58	36.724	ENSFCAG00000011286	SWT1	62	36.724	Felis_catus
ENSIPUG00000009113	-	57	36.192	ENSFALG00000003206	SWT1	62	36.192	Ficedula_albicollis
ENSIPUG00000009113	-	68	34.265	ENSFDAG00000007569	SWT1	74	34.071	Fukomys_damarensis
ENSIPUG00000009113	-	57	35.640	ENSGALG00000034230	SWT1	64	35.640	Gallus_gallus
ENSIPUG00000009113	-	56	44.718	ENSGAFG00000007803	-	58	44.718	Gambusia_affinis
ENSIPUG00000009113	-	58	36.724	ENSGAGG00000025050	SWT1	97	36.724	Gopherus_agassizii
ENSIPUG00000009113	-	51	36.791	ENSGGOG00000041167	-	90	36.791	Gorilla_gorilla
ENSIPUG00000009113	-	58	46.087	ENSHBUG00000006188	swt1	68	46.087	Haplochromis_burtoni
ENSIPUG00000009113	-	57	37.544	ENSHGLG00000006542	SWT1	65	37.544	Heterocephalus_glaber_female
ENSIPUG00000009113	-	57	37.544	ENSHGLG00100014408	SWT1	63	37.544	Heterocephalus_glaber_male
ENSIPUG00000009113	-	57	37.279	ENSSTOG00000010356	SWT1	73	34.218	Ictidomys_tridecemlineatus
ENSIPUG00000009113	-	69	33.772	ENSJJAG00000015927	Swt1	77	33.772	Jaculus_jaculus
ENSIPUG00000009113	-	85	37.253	ENSKMAG00000012533	swt1	58	46.032	Kryptolebias_marmoratus
ENSIPUG00000009113	-	58	40.070	ENSLACG00000009194	SWT1	81	40.070	Latimeria_chalumnae
ENSIPUG00000009113	-	56	48.829	ENSLOCG00000001749	swt1	98	49.348	Lepisosteus_oculatus
ENSIPUG00000009113	-	57	36.380	ENSLAFG00000004346	-	94	36.380	Loxodonta_africana
ENSIPUG00000009113	-	69	33.770	ENSMFAG00000031793	SWT1	96	35.986	Macaca_fascicularis
ENSIPUG00000009113	-	69	32.366	ENSMMUG00000013882	SWT1	97	34.429	Macaca_mulatta
ENSIPUG00000009113	-	69	33.671	ENSMNEG00000035502	SWT1	96	35.986	Macaca_nemestrina
ENSIPUG00000009113	-	69	33.529	ENSMLEG00000038692	SWT1	96	36.097	Mandrillus_leucophaeus
ENSIPUG00000009113	-	58	46.087	ENSMZEG00005018489	swt1	68	46.087	Maylandia_zebra
ENSIPUG00000009113	-	56	35.456	ENSMGAG00000000973	SWT1	94	35.284	Meleagris_gallopavo
ENSIPUG00000009113	-	69	31.579	ENSMAUG00000007996	Swt1	71	31.579	Mesocricetus_auratus
ENSIPUG00000009113	-	60	35.235	ENSMICG00000014975	SWT1	64	35.235	Microcebus_murinus
ENSIPUG00000009113	-	58	38.144	ENSMOCG00000009776	Swt1	62	38.144	Microtus_ochrogaster
ENSIPUG00000009113	-	60	35.462	ENSMODG00000007472	SWT1	62	35.462	Monodelphis_domestica
ENSIPUG00000009113	-	58	37.716	MGP_CAROLIEiJ_G0014692	Swt1	69	47.701	Mus_caroli
ENSIPUG00000009113	-	58	37.370	ENSMUSG00000052748	Swt1	69	48.276	Mus_musculus
ENSIPUG00000009113	-	69	34.649	MGP_PahariEiJ_G0027928	Swt1	69	46.552	Mus_pahari
ENSIPUG00000009113	-	58	37.197	MGP_SPRETEiJ_G0015499	Swt1	69	47.701	Mus_spretus
ENSIPUG00000009113	-	69	34.776	ENSMPUG00000011913	SWT1	62	37.500	Mustela_putorius_furo
ENSIPUG00000009113	-	57	37.544	ENSMLUG00000001142	SWT1	60	37.544	Myotis_lucifugus
ENSIPUG00000009113	-	57	36.926	ENSNGAG00000021080	Swt1	73	34.298	Nannospalax_galili
ENSIPUG00000009113	-	69	33.675	ENSNLEG00000018031	SWT1	73	33.675	Nomascus_leucogenys
ENSIPUG00000009113	-	58	46.723	ENSONIG00000009994	swt1	97	45.865	Oreochromis_niloticus
ENSIPUG00000009113	-	58	34.820	ENSOANG00000001013	-	72	34.820	Ornithorhynchus_anatinus
ENSIPUG00000009113	-	68	34.610	ENSOCUG00000004901	SWT1	63	37.370	Oryctolagus_cuniculus
ENSIPUG00000009113	-	79	38.358	ENSORLG00000009682	swt1	84	38.160	Oryzias_latipes
ENSIPUG00000009113	-	94	35.588	ENSORLG00020011654	swt1	84	38.386	Oryzias_latipes_hni
ENSIPUG00000009113	-	87	36.353	ENSORLG00015007734	swt1	59	45.263	Oryzias_latipes_hsok
ENSIPUG00000009113	-	56	47.321	ENSOMEG00000006607	swt1	57	47.321	Oryzias_melastigma
ENSIPUG00000009113	-	58	36.379	ENSOGAG00000016195	SWT1	62	36.379	Otolemur_garnettii
ENSIPUG00000009113	-	58	37.050	ENSOARG00000004156	SWT1	72	34.061	Ovis_aries
ENSIPUG00000009113	-	69	33.918	ENSPPAG00000021400	SWT1	73	33.918	Pan_paniscus
ENSIPUG00000009113	-	58	36.678	ENSPPRG00000023754	SWT1	62	36.678	Panthera_pardus
ENSIPUG00000009113	-	58	36.678	ENSPTIG00000021889	SWT1	62	36.678	Panthera_tigris_altaica
ENSIPUG00000009113	-	69	33.918	ENSPTRG00000001777	SWT1	73	33.918	Pan_troglodytes
ENSIPUG00000009113	-	69	33.724	ENSPANG00000005099	SWT1	96	35.986	Papio_anubis
ENSIPUG00000009113	-	80	42.033	ENSPKIG00000005979	swt1	58	49.642	Paramormyrops_kingsleyae
ENSIPUG00000009113	-	58	36.815	ENSPSIG00000008961	SWT1	62	36.815	Pelodiscus_sinensis
ENSIPUG00000009113	-	58	36.986	ENSPEMG00000008208	Swt1	63	36.986	Peromyscus_maniculatus_bairdii
ENSIPUG00000009113	-	58	34.826	ENSPCIG00000002443	SWT1	62	34.660	Phascolarctos_cinereus
ENSIPUG00000009113	-	56	44.097	ENSPFOG00000010988	-	69	43.074	Poecilia_formosa
ENSIPUG00000009113	-	56	44.271	ENSPLAG00000022908	-	58	44.271	Poecilia_latipinna
ENSIPUG00000009113	-	56	44.444	ENSPMEG00000006943	-	58	44.444	Poecilia_mexicana
ENSIPUG00000009113	-	69	34.111	ENSPPYG00000000415	SWT1	73	34.111	Pongo_abelii
ENSIPUG00000009113	-	52	41.162	ENSPCAG00000008337	SWT1	55	41.162	Procavia_capensis
ENSIPUG00000009113	-	57	34.159	ENSPVAG00000005968	SWT1	74	31.772	Pteropus_vampyrus
ENSIPUG00000009113	-	58	46.087	ENSPNYG00000012934	swt1	68	46.087	Pundamilia_nyererei
ENSIPUG00000009113	-	93	55.854	ENSPNAG00000017795	swt1	95	55.725	Pygocentrus_nattereri
ENSIPUG00000009113	-	69	34.840	ENSRNOG00000032258	Swt1	73	34.061	Rattus_norvegicus
ENSIPUG00000009113	-	69	33.382	ENSRBIG00000040630	SWT1	96	35.540	Rhinopithecus_bieti
ENSIPUG00000009113	-	58	35.017	ENSSHAG00000009241	SWT1	62	35.017	Sarcophilus_harrisii
ENSIPUG00000009113	-	56	49.040	ENSSDUG00000012345	swt1	58	48.955	Seriola_dumerili
ENSIPUG00000009113	-	57	48.962	ENSSLDG00000003821	swt1	58	48.955	Seriola_lalandi_dorsalis
ENSIPUG00000009113	-	58	36.442	ENSSPUG00000003899	SWT1	62	36.442	Sphenodon_punctatus
ENSIPUG00000009113	-	94	34.817	ENSSPAG00000001030	swt1	59	46.701	Stegastes_partitus
ENSIPUG00000009113	-	69	34.738	ENSSSCG00000015569	SWT1	74	34.357	Sus_scrofa
ENSIPUG00000009113	-	56	36.720	ENSTGUG00000003718	-	98	36.720	Taeniopygia_guttata
ENSIPUG00000009113	-	95	37.646	ENSTRUG00000006420	swt1	62	47.153	Takifugu_rubripes
ENSIPUG00000009113	-	58	36.552	ENSTTRG00000005914	SWT1	62	36.552	Tursiops_truncatus
ENSIPUG00000009113	-	69	35.311	ENSUAMG00000020937	SWT1	80	35.311	Ursus_americanus
ENSIPUG00000009113	-	60	37.793	ENSUMAG00000021918	SWT1	64	37.793	Ursus_maritimus
ENSIPUG00000009113	-	61	35.593	ENSVPAG00000011855	SWT1	56	37.864	Vicugna_pacos
ENSIPUG00000009113	-	68	33.824	ENSVVUG00000009182	SWT1	65	36.207	Vulpes_vulpes
ENSIPUG00000009113	-	68	42.878	ENSXMAG00000023472	-	69	42.029	Xiphophorus_maculatus