EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000009383 (Gene tree)
Gene ID: 108267274
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 14648 bases
Position: chr7:23707368-23722015
Accession: 108267274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000013705	DUF382	PF04037.13	2.1e-58	1	1
ENSIPUP00000013705	SAP	PF02037.27	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000014279	-	3314	XM_017471279	ENSIPUP00000013705	869 (aa)	XP_017326768	A0A2D0R854

Gene Model

Click here to download ENSIPUG00000009383's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009383	sf3b2	85	71.748	ENSG00000087365	SF3B2	99	85.802	Homo_sapiens
ENSIPUG00000009383	sf3b2	97	75.455	ENSAPOG00000001974	sf3b2	96	75.029	Acanthochromis_polyacanthus
ENSIPUG00000009383	sf3b2	85	72.727	ENSAMEG00000017206	SF3B2	80	72.297	Ailuropoda_melanoleuca
ENSIPUG00000009383	sf3b2	100	73.064	ENSACIG00000000624	sf3b2	100	73.064	Amphilophus_citrinellus
ENSIPUG00000009383	sf3b2	100	74.834	ENSAOCG00000009207	sf3b2	100	74.586	Amphiprion_ocellaris
ENSIPUG00000009383	sf3b2	100	76.027	ENSAPEG00000002762	sf3b2	100	72.536	Amphiprion_percula
ENSIPUG00000009383	sf3b2	99	55.446	ENSACAG00000008615	SF3B2	98	54.158	Anolis_carolinensis
ENSIPUG00000009383	sf3b2	85	71.879	ENSANAG00000029120	SF3B2	97	66.213	Aotus_nancymaae
ENSIPUG00000009383	sf3b2	100	72.626	ENSACLG00000014771	sf3b2	100	72.848	Astatotilapia_calliptera
ENSIPUG00000009383	sf3b2	100	83.539	ENSAMXG00000007929	sf3b2	100	83.315	Astyanax_mexicanus
ENSIPUG00000009383	sf3b2	85	72.691	ENSBTAG00000002778	SF3B2	80	72.260	Bos_taurus
ENSIPUG00000009383	sf3b2	67	47.869	WBGene00021004	sftb-2	89	49.909	Caenorhabditis_elegans
ENSIPUG00000009383	sf3b2	85	71.748	ENSCJAG00000001656	SF3B2	97	66.100	Callithrix_jacchus
ENSIPUG00000009383	sf3b2	85	72.825	ENSCAFG00000013033	SF3B2	81	72.395	Canis_familiaris
ENSIPUG00000009383	sf3b2	85	72.825	ENSCAFG00020015382	SF3B2	81	72.395	Canis_lupus_dingo
ENSIPUG00000009383	sf3b2	85	72.691	ENSCHIG00000011211	SF3B2	81	72.260	Capra_hircus
ENSIPUG00000009383	sf3b2	85	71.616	ENSTSYG00000000959	SF3B2	97	65.760	Carlito_syrichta
ENSIPUG00000009383	sf3b2	72	70.507	ENSCPOG00000008294	SF3B2	96	63.934	Cavia_porcellus
ENSIPUG00000009383	sf3b2	85	71.748	ENSCCAG00000035256	SF3B2	97	66.100	Cebus_capucinus
ENSIPUG00000009383	sf3b2	85	71.748	ENSCATG00000042240	SF3B2	97	65.986	Cercocebus_atys
ENSIPUG00000009383	sf3b2	83	71.640	ENSCLAG00000016852	SF3B2	97	65.203	Chinchilla_lanigera
ENSIPUG00000009383	sf3b2	85	71.748	ENSCSAG00000008121	SF3B2	97	65.184	Chlorocebus_sabaeus
ENSIPUG00000009383	sf3b2	82	82.266	ENSCHOG00000001476	SF3B2	69	76.355	Choloepus_hoffmanni
ENSIPUG00000009383	sf3b2	82	72.951	ENSCPBG00000022465	SF3B2	88	78.538	Chrysemys_picta_bellii
ENSIPUG00000009383	sf3b2	74	60.490	ENSCING00000005665	-	84	66.667	Ciona_intestinalis
ENSIPUG00000009383	sf3b2	62	66.480	ENSCSAVG00000002029	-	84	66.041	Ciona_savignyi
ENSIPUG00000009383	sf3b2	85	71.748	ENSCANG00000039680	SF3B2	97	65.986	Colobus_angolensis_palliatus
ENSIPUG00000009383	sf3b2	83	71.951	ENSCGRG00001015741	Sf3b2	97	66.100	Cricetulus_griseus_chok1gshd
ENSIPUG00000009383	sf3b2	83	71.951	ENSCGRG00000018110	Sf3b2	97	66.100	Cricetulus_griseus_crigri
ENSIPUG00000009383	sf3b2	87	72.549	ENSCSEG00000000230	sf3b2	100	66.667	Cynoglossus_semilaevis
ENSIPUG00000009383	sf3b2	100	71.955	ENSCVAG00000003357	sf3b2	100	71.732	Cyprinodon_variegatus
ENSIPUG00000009383	sf3b2	99	79.094	ENSDARG00000018049	sf3b2	99	78.978	Danio_rerio
ENSIPUG00000009383	sf3b2	84	71.984	ENSDNOG00000009484	SF3B2	96	69.093	Dasypus_novemcinctus
ENSIPUG00000009383	sf3b2	83	71.467	ENSDORG00000002495	Sf3b2	97	65.950	Dipodomys_ordii
ENSIPUG00000009383	sf3b2	57	78.912	ENSETEG00000020284	SF3B2	82	78.311	Echinops_telfairi
ENSIPUG00000009383	sf3b2	84	61.886	ENSEBUG00000013703	sf3b2	99	56.620	Eptatretus_burgeri
ENSIPUG00000009383	sf3b2	85	71.979	ENSEASG00005004508	SF3B2	81	72.432	Equus_asinus_asinus
ENSIPUG00000009383	sf3b2	85	71.979	ENSECAG00000024461	SF3B2	81	72.432	Equus_caballus
ENSIPUG00000009383	sf3b2	60	76.378	ENSEEUG00000014278	-	58	74.803	Erinaceus_europaeus
ENSIPUG00000009383	sf3b2	100	75.325	ENSELUG00000005586	sf3b2	100	73.081	Esox_lucius
ENSIPUG00000009383	sf3b2	85	72.825	ENSFCAG00000013289	SF3B2	97	65.760	Felis_catus
ENSIPUG00000009383	sf3b2	74	67.385	ENSFALG00000014653	SF3B2	91	66.821	Ficedula_albicollis
ENSIPUG00000009383	sf3b2	85	71.768	ENSFDAG00000019806	SF3B2	97	64.838	Fukomys_damarensis
ENSIPUG00000009383	sf3b2	100	71.982	ENSFHEG00000020968	sf3b2	100	71.746	Fundulus_heteroclitus
ENSIPUG00000009383	sf3b2	75	82.622	ENSGMOG00000012131	sf3b2	99	83.232	Gadus_morhua
ENSIPUG00000009383	sf3b2	61	90.467	ENSGAFG00000001675	sf3b2	100	71.350	Gambusia_affinis
ENSIPUG00000009383	sf3b2	75	81.053	ENSGACG00000019012	sf3b2	99	82.132	Gasterosteus_aculeatus
ENSIPUG00000009383	sf3b2	83	73.072	ENSGAGG00000023916	SF3B2	98	67.963	Gopherus_agassizii
ENSIPUG00000009383	sf3b2	76	86.464	ENSGGOG00000028448	SF3B2	97	85.912	Gorilla_gorilla
ENSIPUG00000009383	sf3b2	100	72.737	ENSHBUG00000017349	sf3b2	100	72.958	Haplochromis_burtoni
ENSIPUG00000009383	sf3b2	83	71.640	ENSHGLG00000010807	SF3B2	97	65.203	Heterocephalus_glaber_female
ENSIPUG00000009383	sf3b2	85	71.616	ENSHGLG00100006361	SF3B2	97	65.203	Heterocephalus_glaber_male
ENSIPUG00000009383	sf3b2	100	71.620	ENSHCOG00000016203	sf3b2	100	71.188	Hippocampus_comes
ENSIPUG00000009383	sf3b2	85	72.630	ENSSTOG00000028892	SF3B2	97	66.212	Ictidomys_tridecemlineatus
ENSIPUG00000009383	sf3b2	83	72.102	ENSJJAG00000018193	Sf3b2	97	65.537	Jaculus_jaculus
ENSIPUG00000009383	sf3b2	61	89.533	ENSKMAG00000020181	sf3b2	100	69.460	Kryptolebias_marmoratus
ENSIPUG00000009383	sf3b2	100	76.121	ENSLBEG00000027739	sf3b2	100	74.558	Labrus_bergylta
ENSIPUG00000009383	sf3b2	82	77.623	ENSLACG00000010429	SF3B2	83	77.599	Latimeria_chalumnae
ENSIPUG00000009383	sf3b2	83	72.690	ENSLAFG00000002128	SF3B2	97	65.463	Loxodonta_africana
ENSIPUG00000009383	sf3b2	85	71.654	ENSMFAG00000003064	SF3B2	97	65.912	Macaca_fascicularis
ENSIPUG00000009383	sf3b2	85	67.596	ENSMMUG00000011743	SF3B2	97	62.301	Macaca_mulatta
ENSIPUG00000009383	sf3b2	85	71.748	ENSMNEG00000034437	SF3B2	97	65.537	Macaca_nemestrina
ENSIPUG00000009383	sf3b2	85	71.748	ENSMLEG00000029373	SF3B2	97	65.537	Mandrillus_leucophaeus
ENSIPUG00000009383	sf3b2	100	76.075	ENSMAMG00000014103	sf3b2	100	75.110	Mastacembelus_armatus
ENSIPUG00000009383	sf3b2	100	72.338	ENSMZEG00005020789	sf3b2	100	72.848	Maylandia_zebra
ENSIPUG00000009383	sf3b2	98	64.103	ENSMICG00000016942	-	97	64.302	Microcebus_murinus
ENSIPUG00000009383	sf3b2	85	71.616	ENSMICG00000008565	-	97	65.873	Microcebus_murinus
ENSIPUG00000009383	sf3b2	83	71.816	ENSMOCG00000003136	Sf3b2	97	65.986	Microtus_ochrogaster
ENSIPUG00000009383	sf3b2	100	72.291	ENSMMOG00000012928	sf3b2	100	71.429	Mola_mola
ENSIPUG00000009383	sf3b2	83	72.033	ENSMODG00000008490	-	89	70.628	Monodelphis_domestica
ENSIPUG00000009383	sf3b2	73	73.250	ENSMODG00000025020	-	100	70.062	Monodelphis_domestica
ENSIPUG00000009383	sf3b2	100	71.111	ENSMALG00000015137	sf3b2	86	74.136	Monopterus_albus
ENSIPUG00000009383	sf3b2	83	71.816	MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.215	Mus_caroli
ENSIPUG00000009383	sf3b2	83	71.237	ENSMUSG00000024853	Sf3b2	97	65.986	Mus_musculus
ENSIPUG00000009383	sf3b2	83	70.968	MGP_PahariEiJ_G0014036	Sf3b2	97	65.760	Mus_pahari
ENSIPUG00000009383	sf3b2	83	71.102	MGP_SPRETEiJ_G0023453	Sf3b2	97	65.986	Mus_spretus
ENSIPUG00000009383	sf3b2	85	72.825	ENSMPUG00000011349	SF3B2	81	72.395	Mustela_putorius_furo
ENSIPUG00000009383	sf3b2	85	71.713	ENSMLUG00000011136	SF3B2	80	72.666	Myotis_lucifugus
ENSIPUG00000009383	sf3b2	83	71.467	ENSNGAG00000012103	Sf3b2	97	65.385	Nannospalax_galili
ENSIPUG00000009383	sf3b2	85	69.764	ENSNLEG00000006007	SF3B2	97	62.796	Nomascus_leucogenys
ENSIPUG00000009383	sf3b2	75	80.886	ENSMEUG00000000019	SF3B2	67	80.332	Notamacropus_eugenii
ENSIPUG00000009383	sf3b2	83	67.742	ENSODEG00000017764	SF3B2	97	61.669	Octodon_degus
ENSIPUG00000009383	sf3b2	100	74.614	ENSONIG00000013068	sf3b2	100	73.980	Oreochromis_niloticus
ENSIPUG00000009383	sf3b2	58	47.784	ENSOCUG00000024154	-	82	51.121	Oryctolagus_cuniculus
ENSIPUG00000009383	sf3b2	98	66.365	ENSOCUG00000015722	-	85	71.791	Oryctolagus_cuniculus
ENSIPUG00000009383	sf3b2	100	72.452	ENSORLG00000008235	sf3b2	97	70.819	Oryzias_latipes
ENSIPUG00000009383	sf3b2	100	72.452	ENSORLG00020005357	sf3b2	100	70.819	Oryzias_latipes_hni
ENSIPUG00000009383	sf3b2	100	72.676	ENSORLG00015022454	sf3b2	83	79.688	Oryzias_latipes_hsok
ENSIPUG00000009383	sf3b2	100	72.059	ENSOMEG00000017480	sf3b2	100	71.751	Oryzias_melastigma
ENSIPUG00000009383	sf3b2	85	69.514	ENSOGAG00000005799	SF3B2	59	85.316	Otolemur_garnettii
ENSIPUG00000009383	sf3b2	98	66.363	ENSOARG00000002125	SF3B2	98	72.005	Ovis_aries
ENSIPUG00000009383	sf3b2	85	71.748	ENSPPAG00000007359	SF3B2	97	65.295	Pan_paniscus
ENSIPUG00000009383	sf3b2	85	72.825	ENSPPRG00000013334	SF3B2	97	65.760	Panthera_pardus
ENSIPUG00000009383	sf3b2	85	72.825	ENSPTIG00000015022	SF3B2	97	65.760	Panthera_tigris_altaica
ENSIPUG00000009383	sf3b2	85	71.748	ENSPTRG00000003912	SF3B2	97	65.295	Pan_troglodytes
ENSIPUG00000009383	sf3b2	85	71.748	ENSPANG00000008593	SF3B2	97	65.986	Papio_anubis
ENSIPUG00000009383	sf3b2	100	76.786	ENSPKIG00000016576	sf3b2	100	76.734	Paramormyrops_kingsleyae
ENSIPUG00000009383	sf3b2	83	73.342	ENSPSIG00000003158	SF3B2	97	71.410	Pelodiscus_sinensis
ENSIPUG00000009383	sf3b2	93	71.503	ENSPMGG00000000819	sf3b2	100	67.673	Periophthalmus_magnuspinnatus
ENSIPUG00000009383	sf3b2	84	65.328	ENSPEMG00000015451	-	94	65.026	Peromyscus_maniculatus_bairdii
ENSIPUG00000009383	sf3b2	83	71.816	ENSPEMG00000015437	Sf3b2	97	66.100	Peromyscus_maniculatus_bairdii
ENSIPUG00000009383	sf3b2	98	65.587	ENSPCIG00000008381	SF3B2	99	66.364	Phascolarctos_cinereus
ENSIPUG00000009383	sf3b2	100	71.350	ENSPFOG00000002552	sf3b2	100	71.903	Poecilia_formosa
ENSIPUG00000009383	sf3b2	100	71.064	ENSPLAG00000001471	sf3b2	100	71.903	Poecilia_latipinna
ENSIPUG00000009383	sf3b2	100	72.315	ENSPMEG00000013180	sf3b2	100	71.872	Poecilia_mexicana
ENSIPUG00000009383	sf3b2	100	71.650	ENSPREG00000002665	sf3b2	100	71.271	Poecilia_reticulata
ENSIPUG00000009383	sf3b2	57	66.279	ENSPPYG00000003034	-	94	58.806	Pongo_abelii
ENSIPUG00000009383	sf3b2	85	72.244	ENSPCAG00000005129	SF3B2	81	72.395	Procavia_capensis
ENSIPUG00000009383	sf3b2	85	71.616	ENSPCOG00000025375	SF3B2	97	65.873	Propithecus_coquereli
ENSIPUG00000009383	sf3b2	52	93.421	ENSPVAG00000005466	-	74	93.421	Pteropus_vampyrus
ENSIPUG00000009383	sf3b2	88	77.778	ENSPNYG00000023594	sf3b2	100	77.503	Pundamilia_nyererei
ENSIPUG00000009383	sf3b2	100	85.135	ENSPNAG00000001891	sf3b2	100	84.910	Pygocentrus_nattereri
ENSIPUG00000009383	sf3b2	83	71.545	ENSRNOG00000020412	Sf3b2	97	65.873	Rattus_norvegicus
ENSIPUG00000009383	sf3b2	85	71.616	ENSRBIG00000034065	SF3B2	97	65.986	Rhinopithecus_bieti
ENSIPUG00000009383	sf3b2	85	71.616	ENSRROG00000034496	SF3B2	97	65.986	Rhinopithecus_roxellana
ENSIPUG00000009383	sf3b2	98	65.242	ENSSBOG00000026337	SF3B2	97	63.837	Saimiri_boliviensis_boliviensis
ENSIPUG00000009383	sf3b2	97	55.302	ENSSHAG00000018043	-	100	56.014	Sarcophilus_harrisii
ENSIPUG00000009383	sf3b2	73	74.845	ENSSHAG00000010933	-	97	62.290	Sarcophilus_harrisii
ENSIPUG00000009383	sf3b2	100	73.230	ENSSFOG00015021125	sf3b2	100	74.082	Scleropages_formosus
ENSIPUG00000009383	sf3b2	100	74.699	ENSSMAG00000004079	sf3b2	100	71.162	Scophthalmus_maximus
ENSIPUG00000009383	sf3b2	61	92.060	ENSSLDG00000006838	sf3b2	100	74.945	Seriola_lalandi_dorsalis
ENSIPUG00000009383	sf3b2	73	80.125	ENSSPUG00000009198	SF3B2	98	65.953	Sphenodon_punctatus
ENSIPUG00000009383	sf3b2	100	74.595	ENSSPAG00000004406	sf3b2	100	73.673	Stegastes_partitus
ENSIPUG00000009383	sf3b2	85	72.149	ENSSSCG00000012957	SF3B2	81	72.874	Sus_scrofa
ENSIPUG00000009383	sf3b2	100	61.996	ENSTRUG00000007611	sf3b2	97	71.614	Takifugu_rubripes
ENSIPUG00000009383	sf3b2	87	75.032	ENSTNIG00000007441	sf3b2	100	70.953	Tetraodon_nigroviridis
ENSIPUG00000009383	sf3b2	88	64.973	ENSTBEG00000004258	SF3B2	86	64.423	Tupaia_belangeri
ENSIPUG00000009383	sf3b2	84	72.386	ENSTTRG00000014339	SF3B2	81	71.678	Tursiops_truncatus
ENSIPUG00000009383	sf3b2	83	72.055	ENSUAMG00000020754	SF3B2	77	72.050	Ursus_americanus
ENSIPUG00000009383	sf3b2	85	72.825	ENSUMAG00000010994	SF3B2	81	72.395	Ursus_maritimus
ENSIPUG00000009383	sf3b2	58	75.591	ENSVPAG00000008695	SF3B2	58	74.016	Vicugna_pacos
ENSIPUG00000009383	sf3b2	85	72.112	ENSVVUG00000027029	SF3B2	81	72.470	Vulpes_vulpes
ENSIPUG00000009383	sf3b2	81	70.804	ENSXETG00000008422	sf3b2	83	74.507	Xenopus_tropicalis
ENSIPUG00000009383	sf3b2	76	77.193	ENSXCOG00000008943	sf3b2	85	80.655	Xiphophorus_couchianus
ENSIPUG00000009383	sf3b2	61	90.280	ENSXMAG00000008467	sf3b2	100	70.925	Xiphophorus_maculatus