EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000009406 (Gene tree)
Gene ID: 108263541
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 69467 bases
Position: chr3:23237389-23306855
Accession: 108263541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000013746	PPR	PF01535.20	9.7e-35	1	5
ENSIPUP00000013746	PPR	PF01535.20	9.7e-35	2	5
ENSIPUP00000013746	PPR	PF01535.20	9.7e-35	3	5
ENSIPUP00000013746	PPR	PF01535.20	9.7e-35	4	5
ENSIPUP00000013746	PPR	PF01535.20	9.7e-35	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000014323	-	4625	XM_017464447	ENSIPUP00000013746	1446 (aa)	XP_017319936	-

Gene Model

Click here to download ENSIPUG00000009406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009406	lrpprc	99	62.248	ENSAPOG00000016610	lrpprc	99	62.248	Acanthochromis_polyacanthus
ENSIPUG00000009406	lrpprc	94	52.111	ENSAMEG00000005852	LRPPRC	99	52.111	Ailuropoda_melanoleuca
ENSIPUG00000009406	lrpprc	99	60.724	ENSACIG00000009604	lrpprc	99	60.724	Amphilophus_citrinellus
ENSIPUG00000009406	lrpprc	99	63.037	ENSAOCG00000005886	lrpprc	99	63.176	Amphiprion_ocellaris
ENSIPUG00000009406	lrpprc	99	59.610	ENSAPEG00000002937	lrpprc	98	59.749	Amphiprion_percula
ENSIPUG00000009406	lrpprc	91	64.453	ENSATEG00000010555	lrpprc	97	61.538	Anabas_testudineus
ENSIPUG00000009406	lrpprc	94	58.017	ENSACAG00000029278	LRPPRC	98	57.491	Anolis_carolinensis
ENSIPUG00000009406	lrpprc	99	52.368	ENSANAG00000027440	LRPPRC	97	53.035	Aotus_nancymaae
ENSIPUG00000009406	lrpprc	95	59.928	ENSACLG00000023712	lrpprc	92	69.620	Astatotilapia_calliptera
ENSIPUG00000009406	lrpprc	99	51.494	ENSCJAG00000000794	LRPPRC	97	52.529	Callithrix_jacchus
ENSIPUG00000009406	lrpprc	96	52.439	ENSCHIG00000020173	LRPPRC	99	51.676	Capra_hircus
ENSIPUG00000009406	lrpprc	94	41.540	ENSCAPG00000013631	LRPPRC	99	41.540	Cavia_aperea
ENSIPUG00000009406	lrpprc	85	50.814	ENSCPOG00000000204	LRPPRC	99	50.814	Cavia_porcellus
ENSIPUG00000009406	lrpprc	99	51.947	ENSCCAG00000031900	LRPPRC	88	62.260	Cebus_capucinus
ENSIPUG00000009406	lrpprc	95	52.209	ENSCATG00000014187	LRPPRC	90	60.124	Cercocebus_atys
ENSIPUG00000009406	lrpprc	98	50.592	ENSCLAG00000005203	LRPPRC	93	52.167	Chinchilla_lanigera
ENSIPUG00000009406	lrpprc	95	52.788	ENSCSAG00000013233	LRPPRC	97	52.933	Chlorocebus_sabaeus
ENSIPUG00000009406	lrpprc	78	53.253	ENSCHOG00000003631	LRPPRC	80	53.253	Choloepus_hoffmanni
ENSIPUG00000009406	lrpprc	94	50.768	ENSCANG00000034961	LRPPRC	99	70.175	Colobus_angolensis_palliatus
ENSIPUG00000009406	lrpprc	94	51.286	ENSCGRG00001016261	Lrpprc	95	51.320	Cricetulus_griseus_chok1gshd
ENSIPUG00000009406	lrpprc	94	51.286	ENSCGRG00000004072	Lrpprc	95	51.320	Cricetulus_griseus_crigri
ENSIPUG00000009406	lrpprc	98	47.934	ENSCSEG00000003850	lrpprc	86	58.409	Cynoglossus_semilaevis
ENSIPUG00000009406	lrpprc	98	63.350	ENSCVAG00000012967	lrpprc	99	63.350	Cyprinodon_variegatus
ENSIPUG00000009406	lrpprc	99	60.248	ENSDARG00000043970	lrpprc	98	60.248	Danio_rerio
ENSIPUG00000009406	lrpprc	77	41.271	ENSDNOG00000032336	-	95	41.271	Dasypus_novemcinctus
ENSIPUG00000009406	lrpprc	98	51.257	ENSDNOG00000012594	-	99	51.327	Dasypus_novemcinctus
ENSIPUG00000009406	lrpprc	96	52.525	ENSDORG00000012233	Lrpprc	97	52.525	Dipodomys_ordii
ENSIPUG00000009406	lrpprc	96	51.689	ENSETEG00000006657	LRPPRC	99	51.261	Echinops_telfairi
ENSIPUG00000009406	lrpprc	85	42.581	ENSEEUG00000012340	LRPPRC	93	42.480	Erinaceus_europaeus
ENSIPUG00000009406	lrpprc	94	56.591	ENSELUG00000012803	lrpprc	98	56.591	Esox_lucius
ENSIPUG00000009406	lrpprc	98	52.238	ENSFCAG00000013468	LRPPRC	99	52.304	Felis_catus
ENSIPUG00000009406	lrpprc	93	49.082	ENSFALG00000012738	LRPPRC	99	49.082	Ficedula_albicollis
ENSIPUG00000009406	lrpprc	92	52.167	ENSFDAG00000015328	LRPPRC	93	52.167	Fukomys_damarensis
ENSIPUG00000009406	lrpprc	98	61.641	ENSFHEG00000019604	lrpprc	99	61.641	Fundulus_heteroclitus
ENSIPUG00000009406	lrpprc	99	57.332	ENSGMOG00000008337	lrpprc	98	58.074	Gadus_morhua
ENSIPUG00000009406	lrpprc	99	62.132	ENSGAFG00000001455	lrpprc	99	62.132	Gambusia_affinis
ENSIPUG00000009406	lrpprc	99	61.096	ENSGACG00000010679	lrpprc	99	63.285	Gasterosteus_aculeatus
ENSIPUG00000009406	lrpprc	99	64.400	ENSHBUG00000000393	lrpprc	98	64.400	Haplochromis_burtoni
ENSIPUG00000009406	lrpprc	98	50.104	ENSHGLG00000006123	LRPPRC	98	50.355	Heterocephalus_glaber_female
ENSIPUG00000009406	lrpprc	59	48.066	ENSHGLG00100005960	-	99	48.066	Heterocephalus_glaber_male
ENSIPUG00000009406	lrpprc	98	60.916	ENSHCOG00000002107	lrpprc	100	60.916	Hippocampus_comes
ENSIPUG00000009406	lrpprc	98	50.907	ENSSTOG00000011185	LRPPRC	99	51.116	Ictidomys_tridecemlineatus
ENSIPUG00000009406	lrpprc	95	51.445	ENSJJAG00000020475	Lrpprc	99	50.819	Jaculus_jaculus
ENSIPUG00000009406	lrpprc	97	55.446	ENSKMAG00000003287	lrpprc	84	55.587	Kryptolebias_marmoratus
ENSIPUG00000009406	lrpprc	99	56.298	ENSLBEG00000023225	lrpprc	96	65.692	Labrus_bergylta
ENSIPUG00000009406	lrpprc	98	59.777	ENSLACG00000014030	LRPPRC	100	59.569	Latimeria_chalumnae
ENSIPUG00000009406	lrpprc	99	62.273	ENSLOCG00000016390	lrpprc	97	62.273	Lepisosteus_oculatus
ENSIPUG00000009406	lrpprc	98	50.139	ENSLAFG00000008614	LRPPRC	99	50.139	Loxodonta_africana
ENSIPUG00000009406	lrpprc	95	52.278	ENSMFAG00000041560	LRPPRC	99	75.622	Macaca_fascicularis
ENSIPUG00000009406	lrpprc	95	51.844	ENSMMUG00000019841	LRPPRC	99	75.622	Macaca_mulatta
ENSIPUG00000009406	lrpprc	95	52.061	ENSMNEG00000031613	LRPPRC	100	51.216	Macaca_nemestrina
ENSIPUG00000009406	lrpprc	97	56.740	ENSMAMG00000021835	lrpprc	98	56.872	Mastacembelus_armatus
ENSIPUG00000009406	lrpprc	99	64.400	ENSMZEG00005027379	lrpprc	99	64.400	Maylandia_zebra
ENSIPUG00000009406	lrpprc	96	50.535	ENSMAUG00000012118	Lrpprc	99	50.769	Mesocricetus_auratus
ENSIPUG00000009406	lrpprc	99	52.198	ENSMICG00000010486	LRPPRC	99	55.657	Microcebus_murinus
ENSIPUG00000009406	lrpprc	98	51.116	ENSMOCG00000006048	Lrpprc	98	51.687	Microtus_ochrogaster
ENSIPUG00000009406	lrpprc	98	59.129	ENSMMOG00000007830	lrpprc	94	66.148	Mola_mola
ENSIPUG00000009406	lrpprc	94	53.040	ENSMODG00000000648	LRPPRC	99	53.040	Monodelphis_domestica
ENSIPUG00000009406	lrpprc	98	59.846	ENSMALG00000001271	lrpprc	99	59.846	Monopterus_albus
ENSIPUG00000009406	lrpprc	94	53.580	ENSMPUG00000011800	LRPPRC	97	53.580	Mustela_putorius_furo
ENSIPUG00000009406	lrpprc	98	52.265	ENSMLUG00000010575	LRPPRC	99	52.195	Myotis_lucifugus
ENSIPUG00000009406	lrpprc	98	51.189	ENSNGAG00000013069	Lrpprc	99	51.119	Nannospalax_galili
ENSIPUG00000009406	lrpprc	93	57.522	ENSNBRG00000013202	lrpprc	98	64.648	Neolamprologus_brichardi
ENSIPUG00000009406	lrpprc	99	51.534	ENSNLEG00000016782	LRPPRC	99	56.227	Nomascus_leucogenys
ENSIPUG00000009406	lrpprc	87	52.459	ENSOPRG00000016774	LRPPRC	91	46.411	Ochotona_princeps
ENSIPUG00000009406	lrpprc	94	52.059	ENSODEG00000011211	LRPPRC	99	50.910	Octodon_degus
ENSIPUG00000009406	lrpprc	99	64.816	ENSONIG00000000917	lrpprc	100	64.410	Oreochromis_niloticus
ENSIPUG00000009406	lrpprc	73	48.601	ENSOANG00000014670	-	100	48.601	Ornithorhynchus_anatinus
ENSIPUG00000009406	lrpprc	98	51.955	ENSOCUG00000015046	LRPPRC	95	51.885	Oryctolagus_cuniculus
ENSIPUG00000009406	lrpprc	99	58.345	ENSORLG00000004605	lrpprc	99	57.837	Oryzias_latipes
ENSIPUG00000009406	lrpprc	90	62.111	ENSORLG00020012536	lrpprc	99	61.665	Oryzias_latipes_hni
ENSIPUG00000009406	lrpprc	93	64.844	ENSORLG00015018270	lrpprc	99	64.844	Oryzias_latipes_hsok
ENSIPUG00000009406	lrpprc	94	52.632	ENSOGAG00000012798	LRPPRC	96	52.632	Otolemur_garnettii
ENSIPUG00000009406	lrpprc	94	53.049	ENSOARG00000006522	LRPPRC	99	51.746	Ovis_aries
ENSIPUG00000009406	lrpprc	95	51.404	ENSPPAG00000040876	LRPPRC	90	59.091	Pan_paniscus
ENSIPUG00000009406	lrpprc	98	52.444	ENSPPRG00000006578	LRPPRC	99	52.514	Panthera_pardus
ENSIPUG00000009406	lrpprc	94	53.598	ENSPTIG00000000933	LRPPRC	95	53.598	Panthera_tigris_altaica
ENSIPUG00000009406	lrpprc	99	51.213	ENSPTRG00000011880	LRPPRC	98	55.741	Pan_troglodytes
ENSIPUG00000009406	lrpprc	95	52.064	ENSPANG00000020731	LRPPRC	90	59.711	Papio_anubis
ENSIPUG00000009406	lrpprc	89	60.691	ENSPKIG00000022232	lrpprc	97	60.691	Paramormyrops_kingsleyae
ENSIPUG00000009406	lrpprc	61	55.681	ENSPSIG00000006830	-	99	55.681	Pelodiscus_sinensis
ENSIPUG00000009406	lrpprc	66	54.640	ENSPMGG00000016597	lrpprc	97	54.640	Periophthalmus_magnuspinnatus
ENSIPUG00000009406	lrpprc	92	45.026	ENSPMAG00000002147	lrpprc	99	45.026	Petromyzon_marinus
ENSIPUG00000009406	lrpprc	99	61.781	ENSPFOG00000011227	lrpprc	99	61.781	Poecilia_formosa
ENSIPUG00000009406	lrpprc	99	61.641	ENSPLAG00000004018	lrpprc	99	61.641	Poecilia_latipinna
ENSIPUG00000009406	lrpprc	99	61.641	ENSPMEG00000016425	lrpprc	99	61.641	Poecilia_mexicana
ENSIPUG00000009406	lrpprc	99	61.641	ENSPREG00000003662	lrpprc	99	61.641	Poecilia_reticulata
ENSIPUG00000009406	lrpprc	57	48.910	ENSPPYG00000029532	-	100	48.910	Pongo_abelii
ENSIPUG00000009406	lrpprc	78	52.613	ENSPCAG00000001430	LRPPRC	84	51.265	Procavia_capensis
ENSIPUG00000009406	lrpprc	94	50.550	ENSPVAG00000002007	LRPPRC	98	49.929	Pteropus_vampyrus
ENSIPUG00000009406	lrpprc	99	57.902	ENSPNYG00000000756	lrpprc	90	67.722	Pundamilia_nyererei
ENSIPUG00000009406	lrpprc	99	73.509	ENSPNAG00000002895	lrpprc	100	73.509	Pygocentrus_nattereri
ENSIPUG00000009406	lrpprc	94	51.544	ENSRNOG00000005877	Lrpprc	97	51.079	Rattus_norvegicus
ENSIPUG00000009406	lrpprc	94	52.405	ENSRBIG00000031552	LRPPRC	96	52.551	Rhinopithecus_bieti
ENSIPUG00000009406	lrpprc	99	52.295	ENSSBOG00000011807	LRPPRC	99	56.960	Saimiri_boliviensis_boliviensis
ENSIPUG00000009406	lrpprc	93	52.802	ENSSHAG00000018725	LRPPRC	99	52.802	Sarcophilus_harrisii
ENSIPUG00000009406	lrpprc	98	57.631	ENSSFOG00015001042	lrpprc	99	57.631	Scleropages_formosus
ENSIPUG00000009406	lrpprc	98	62.088	ENSSDUG00000019062	lrpprc	99	62.088	Seriola_dumerili
ENSIPUG00000009406	lrpprc	98	53.968	ENSSLDG00000023028	lrpprc	99	50.522	Seriola_lalandi_dorsalis
ENSIPUG00000009406	lrpprc	89	48.910	ENSSARG00000000426	LRPPRC	99	49.151	Sorex_araneus
ENSIPUG00000009406	lrpprc	99	58.559	ENSSPAG00000000162	lrpprc	99	58.766	Stegastes_partitus
ENSIPUG00000009406	lrpprc	98	52.204	ENSSSCG00000008452	LRPPRC	99	52.134	Sus_scrofa
ENSIPUG00000009406	lrpprc	92	47.259	ENSTGUG00000003759	LRPPRC	100	47.259	Taeniopygia_guttata
ENSIPUG00000009406	lrpprc	99	62.415	ENSTRUG00000008409	lrpprc	96	62.415	Takifugu_rubripes
ENSIPUG00000009406	lrpprc	98	59.986	ENSTNIG00000007470	lrpprc	99	60.895	Tetraodon_nigroviridis
ENSIPUG00000009406	lrpprc	98	50.385	ENSTTRG00000006403	LRPPRC	99	50.699	Tursiops_truncatus
ENSIPUG00000009406	lrpprc	90	56.437	ENSVPAG00000008993	LRPPRC	94	56.437	Vicugna_pacos
ENSIPUG00000009406	lrpprc	96	58.321	ENSXETG00000009296	lrpprc	99	58.596	Xenopus_tropicalis
ENSIPUG00000009406	lrpprc	98	57.546	ENSXCOG00000013343	lrpprc	95	59.180	Xiphophorus_couchianus
ENSIPUG00000009406	lrpprc	99	62.062	ENSXMAG00000018108	lrpprc	99	62.062	Xiphophorus_maculatus