EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000009518 (Gene tree)
Gene ID: 108275330
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U-like protein 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11989 bases
Position: chr14:20158526-20170514
Accession: 108275330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000013924	SAP	PF02037.27	6.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000014509	-	2344	XM_017486085	ENSIPUP00000013924	717 (aa)	XP_017341574	A0A2D0SFT1

Gene Model

Click here to download ENSIPUG00000009518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000009518	si:ch211-107m4.1	99	33.157	ENSIPUG00000011639	-	90	33.025
ENSIPUG00000009518	si:ch211-107m4.1	67	38.400	ENSIPUG00000024012	HNRNPUL1	72	35.108
ENSIPUG00000009518	si:ch211-107m4.1	69	39.364	ENSIPUG00000007749	hnrnpu	83	35.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009518	si:ch211-107m4.1	78	65.854	ENSAPOG00000005128	si:ch211-107m4.1	84	65.854	Acanthochromis_polyacanthus
ENSIPUG00000009518	si:ch211-107m4.1	89	40.752	ENSACIG00000022729	si:ch211-107m4.1	84	40.752	Amphilophus_citrinellus
ENSIPUG00000009518	si:ch211-107m4.1	100	41.450	ENSAOCG00000017297	si:ch211-107m4.1	100	41.450	Amphiprion_ocellaris
ENSIPUG00000009518	si:ch211-107m4.1	100	39.672	ENSAPEG00000009122	-	100	39.672	Amphiprion_percula
ENSIPUG00000009518	si:ch211-107m4.1	74	38.937	ENSACAG00000000746	-	91	35.226	Anolis_carolinensis
ENSIPUG00000009518	si:ch211-107m4.1	93	42.097	ENSACLG00000018069	si:ch211-107m4.1	99	42.245	Astatotilapia_calliptera
ENSIPUG00000009518	si:ch211-107m4.1	99	66.667	ENSAMXG00000033712	si:ch211-107m4.1	92	66.667	Astyanax_mexicanus
ENSIPUG00000009518	si:ch211-107m4.1	73	40.850	ENSCCAG00000037674	-	97	35.262	Cebus_capucinus
ENSIPUG00000009518	si:ch211-107m4.1	60	48.741	ENSCPBG00000017963	-	96	37.845	Chrysemys_picta_bellii
ENSIPUG00000009518	si:ch211-107m4.1	74	42.226	ENSCGRG00001017076	Hnrnpul2	99	36.719	Cricetulus_griseus_chok1gshd
ENSIPUG00000009518	si:ch211-107m4.1	67	71.429	ENSCSEG00000005686	si:ch211-107m4.1	78	71.429	Cynoglossus_semilaevis
ENSIPUG00000009518	si:ch211-107m4.1	68	63.415	ENSCVAG00000006862	si:ch211-107m4.1	91	41.315	Cyprinodon_variegatus
ENSIPUG00000009518	si:ch211-107m4.1	98	51.429	ENSDARG00000056830	si:ch211-107m4.1	99	51.486	Danio_rerio
ENSIPUG00000009518	si:ch211-107m4.1	73	42.831	ENSDNOG00000006508	-	97	36.523	Dasypus_novemcinctus
ENSIPUG00000009518	si:ch211-107m4.1	79	68.889	ENSELUG00000008134	si:ch211-107m4.1	81	68.889	Esox_lucius
ENSIPUG00000009518	si:ch211-107m4.1	92	41.892	ENSFHEG00000014731	si:ch211-107m4.1	97	41.892	Fundulus_heteroclitus
ENSIPUG00000009518	si:ch211-107m4.1	99	43.198	ENSGAFG00000016579	si:ch211-107m4.1	99	43.198	Gambusia_affinis
ENSIPUG00000009518	si:ch211-107m4.1	67	63.415	ENSGACG00000017006	si:ch211-107m4.1	99	42.154	Gasterosteus_aculeatus
ENSIPUG00000009518	si:ch211-107m4.1	60	48.513	ENSGAGG00000016818	-	92	37.240	Gopherus_agassizii
ENSIPUG00000009518	si:ch211-107m4.1	93	42.206	ENSHBUG00000013076	si:ch211-107m4.1	99	42.206	Haplochromis_burtoni
ENSIPUG00000009518	si:ch211-107m4.1	73	42.385	ENSHGLG00000003285	-	97	37.047	Heterocephalus_glaber_female
ENSIPUG00000009518	si:ch211-107m4.1	74	42.527	ENSSTOG00000004327	-	99	36.506	Ictidomys_tridecemlineatus
ENSIPUG00000009518	si:ch211-107m4.1	74	41.637	ENSJJAG00000011206	Hnrnpul2	99	36.268	Jaculus_jaculus
ENSIPUG00000009518	si:ch211-107m4.1	88	44.252	ENSKMAG00000003651	si:ch211-107m4.1	90	44.252	Kryptolebias_marmoratus
ENSIPUG00000009518	si:ch211-107m4.1	72	43.806	ENSLACG00000009304	-	98	38.981	Latimeria_chalumnae
ENSIPUG00000009518	si:ch211-107m4.1	51	61.905	ENSLOCG00000001003	HNRNPUL2	58	61.905	Lepisosteus_oculatus
ENSIPUG00000009518	si:ch211-107m4.1	99	42.857	ENSMAMG00000021489	si:ch211-107m4.1	99	42.857	Mastacembelus_armatus
ENSIPUG00000009518	si:ch211-107m4.1	93	42.097	ENSMZEG00005005136	si:ch211-107m4.1	99	42.245	Maylandia_zebra
ENSIPUG00000009518	si:ch211-107m4.1	71	48.124	ENSMALG00000011564	si:ch211-107m4.1	99	47.257	Monopterus_albus
ENSIPUG00000009518	si:ch211-107m4.1	74	42.376	ENSMLUG00000000412	-	99	36.701	Myotis_lucifugus
ENSIPUG00000009518	si:ch211-107m4.1	74	42.527	ENSNGAG00000012005	Hnrnpul2	99	37.076	Nannospalax_galili
ENSIPUG00000009518	si:ch211-107m4.1	90	41.041	ENSNBRG00000000429	si:ch211-107m4.1	88	41.041	Neolamprologus_brichardi
ENSIPUG00000009518	si:ch211-107m4.1	73	43.066	ENSNLEG00000004077	-	71	43.066	Nomascus_leucogenys
ENSIPUG00000009518	si:ch211-107m4.1	90	42.705	ENSONIG00000005422	si:ch211-107m4.1	95	42.705	Oreochromis_niloticus
ENSIPUG00000009518	si:ch211-107m4.1	93	42.984	ENSORLG00000024574	si:ch211-107m4.1	99	41.246	Oryzias_latipes
ENSIPUG00000009518	si:ch211-107m4.1	78	66.667	ENSOMEG00000018153	si:ch211-107m4.1	87	66.667	Oryzias_melastigma
ENSIPUG00000009518	si:ch211-107m4.1	61	46.341	ENSOGAG00000003302	-	68	44.643	Otolemur_garnettii
ENSIPUG00000009518	si:ch211-107m4.1	73	43.066	ENSPTRG00000034359	HNRNPUL2	71	43.066	Pan_troglodytes
ENSIPUG00000009518	si:ch211-107m4.1	71	42.336	ENSPCIG00000015254	-	53	43.486	Phascolarctos_cinereus
ENSIPUG00000009518	si:ch211-107m4.1	86	43.642	ENSPFOG00000008050	si:ch211-107m4.1	99	43.956	Poecilia_formosa
ENSIPUG00000009518	si:ch211-107m4.1	99	41.851	ENSPLAG00000003485	si:ch211-107m4.1	99	42.127	Poecilia_latipinna
ENSIPUG00000009518	si:ch211-107m4.1	99	41.806	ENSPMEG00000005490	si:ch211-107m4.1	99	43.036	Poecilia_mexicana
ENSIPUG00000009518	si:ch211-107m4.1	99	41.655	ENSPREG00000014973	si:ch211-107m4.1	99	42.265	Poecilia_reticulata
ENSIPUG00000009518	si:ch211-107m4.1	73	42.701	ENSPCAG00000010016	-	70	42.701	Procavia_capensis
ENSIPUG00000009518	si:ch211-107m4.1	74	41.519	ENSRNOG00000019507	Hnrnpul2	74	41.519	Rattus_norvegicus
ENSIPUG00000009518	si:ch211-107m4.1	81	68.293	ENSSFOG00015006544	si:ch211-107m4.1	69	68.293	Scleropages_formosus
ENSIPUG00000009518	si:ch211-107m4.1	99	41.365	ENSSMAG00000017226	si:ch211-107m4.1	99	41.365	Scophthalmus_maximus
ENSIPUG00000009518	si:ch211-107m4.1	100	41.953	ENSSPAG00000006972	si:ch211-107m4.1	100	42.308	Stegastes_partitus
ENSIPUG00000009518	si:ch211-107m4.1	92	38.808	ENSTRUG00000012843	si:ch211-107m4.1	93	38.808	Takifugu_rubripes
ENSIPUG00000009518	si:ch211-107m4.1	87	40.945	ENSTNIG00000000741	si:ch211-107m4.1	99	41.102	Tetraodon_nigroviridis
ENSIPUG00000009518	si:ch211-107m4.1	88	36.826	ENSXETG00000006015	hnrnpul2	84	36.826	Xenopus_tropicalis
ENSIPUG00000009518	si:ch211-107m4.1	99	41.243	ENSXMAG00000003224	si:ch211-107m4.1	84	59.574	Xiphophorus_maculatus