EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000009577 (Gene tree)
Gene ID: 108269098
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 37-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 3846 bases
Position: chr8:1380543-1384388
Accession: 108269098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000013999	zf-C2H2	PF00096.26	2.1e-29	1	6
ENSIPUP00000013999	zf-C2H2	PF00096.26	2.1e-29	2	6
ENSIPUP00000013999	zf-C2H2	PF00096.26	2.1e-29	3	6
ENSIPUP00000013999	zf-C2H2	PF00096.26	2.1e-29	4	6
ENSIPUP00000013999	zf-C2H2	PF00096.26	2.1e-29	5	6
ENSIPUP00000013999	zf-C2H2	PF00096.26	2.1e-29	6	6
ENSIPUP00000014018	zf-C2H2	PF00096.26	1.8e-24	1	5
ENSIPUP00000014018	zf-C2H2	PF00096.26	1.8e-24	2	5
ENSIPUP00000014018	zf-C2H2	PF00096.26	1.8e-24	3	5
ENSIPUP00000014018	zf-C2H2	PF00096.26	1.8e-24	4	5
ENSIPUP00000014018	zf-C2H2	PF00096.26	1.8e-24	5	5
ENSIPUP00000013999	zf-met	PF12874.7	2.3e-09	1	1
ENSIPUP00000014018	zf-met	PF12874.7	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000014608	-	1422	-	ENSIPUP00000014018	473 (aa)	-	-
ENSIPUT00000014587	-	1633	XM_017474664	ENSIPUP00000013999	505 (aa)	XP_017330153	A0A2D0RHZ5

Gene Model

Click here to download ENSIPUG00000009577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000009577	-	54	37.778	ENSIPUG00000011399	zbtb47b	76	44.898
ENSIPUG00000009577	-	51	36.471	ENSIPUG00000011652	znf648	83	34.359
ENSIPUG00000009577	-	76	40.000	ENSIPUG00000005775	si:dkey-14d8.1	63	40.000
ENSIPUG00000009577	-	54	31.313	ENSIPUG00000001248	prdm5	81	36.515
ENSIPUG00000009577	-	54	34.034	ENSIPUG00000008581	znf319b	94	34.034
ENSIPUG00000009577	-	59	36.994	ENSIPUG00000012109	ZN12	56	36.994
ENSIPUG00000009577	-	51	42.857	ENSIPUG00000023688	-	95	47.619
ENSIPUG00000009577	-	62	39.565	ENSIPUG00000006916	-	76	40.113
ENSIPUG00000009577	-	53	35.333	ENSIPUG00000004905	znf236	72	38.710
ENSIPUG00000009577	-	59	37.500	ENSIPUG00000001941	-	97	37.500
ENSIPUG00000009577	-	50	44.828	ENSIPUG00000002075	znf341	53	30.189
ENSIPUG00000009577	-	55	45.775	ENSIPUG00000016075	-	99	38.288
ENSIPUG00000009577	-	67	40.244	ENSIPUG00000023761	-	74	40.244
ENSIPUG00000009577	-	56	44.578	ENSIPUG00000022751	-	99	41.379
ENSIPUG00000009577	-	56	36.937	ENSIPUG00000024007	-	53	36.937
ENSIPUG00000009577	-	50	38.298	ENSIPUG00000006936	-	77	41.304
ENSIPUG00000009577	-	54	37.768	ENSIPUG00000019205	-	55	37.768
ENSIPUG00000009577	-	70	37.805	ENSIPUG00000003207	hic2	58	42.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009577	-	51	31.532	ENSACIG00000016133	-	64	31.532	Amphilophus_citrinellus
ENSIPUG00000009577	-	61	35.789	ENSAOCG00000000463	-	57	35.789	Amphiprion_ocellaris
ENSIPUG00000009577	-	50	31.507	ENSAPEG00000011635	-	73	30.909	Amphiprion_percula
ENSIPUG00000009577	-	59	40.909	ENSAPEG00000010478	-	59	40.909	Amphiprion_percula
ENSIPUG00000009577	-	50	40.132	ENSATEG00000024551	-	66	40.132	Anabas_testudineus
ENSIPUG00000009577	-	50	31.538	ENSATEG00000011202	-	62	39.130	Anabas_testudineus
ENSIPUG00000009577	-	73	36.667	ENSACLG00000021587	-	61	36.667	Astatotilapia_calliptera
ENSIPUG00000009577	-	68	35.802	ENSGAFG00000016139	-	55	35.802	Gambusia_affinis
ENSIPUG00000009577	-	52	36.765	ENSHBUG00000002878	-	61	38.372	Haplochromis_burtoni
ENSIPUG00000009577	-	73	36.667	ENSHBUG00000003299	-	61	36.667	Haplochromis_burtoni
ENSIPUG00000009577	-	51	37.500	ENSHCOG00000008205	-	84	37.500	Hippocampus_comes
ENSIPUG00000009577	-	52	31.373	ENSLBEG00000014527	-	60	33.908	Labrus_bergylta
ENSIPUG00000009577	-	50	44.762	ENSMALG00000014761	-	86	39.506	Monopterus_albus
ENSIPUG00000009577	-	59	43.750	ENSNBRG00000013838	-	67	43.750	Neolamprologus_brichardi
ENSIPUG00000009577	-	60	40.741	ENSORLG00020016116	-	50	40.741	Oryzias_latipes_hni
ENSIPUG00000009577	-	52	40.741	ENSORLG00015014797	-	50	40.741	Oryzias_latipes_hsok
ENSIPUG00000009577	-	53	32.812	ENSPFOG00000012948	-	70	32.812	Poecilia_formosa
ENSIPUG00000009577	-	51	41.270	ENSPLAG00000009651	-	80	36.508	Poecilia_latipinna
ENSIPUG00000009577	-	68	35.802	ENSPREG00000004161	-	55	35.802	Poecilia_reticulata
ENSIPUG00000009577	-	56	36.667	ENSPNYG00000007907	-	58	36.667	Pundamilia_nyererei
ENSIPUG00000009577	-	51	37.255	ENSPNYG00000023882	-	74	33.210	Pundamilia_nyererei
ENSIPUG00000009577	-	52	42.169	ENSSLDG00000007568	-	84	42.169	Seriola_lalandi_dorsalis
ENSIPUG00000009577	-	68	35.802	ENSXMAG00000011035	-	55	35.802	Xiphophorus_maculatus