EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000009673 (Gene tree)
Gene ID: 108274287
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 14312 bases
Position: chr13:9470334-9484645
Accession: 108274287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014183	KH_1	PF00013.29	7.8e-17	1	1
ENSIPUP00000014139	KH_1	PF00013.29	2.2e-16	1	1
ENSIPUP00000014183	TUDOR	PF00567.24	1.2e-25	1	1
ENSIPUP00000014139	TUDOR	PF00567.24	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000014735	-	4067	XM_017484367	ENSIPUP00000014139	906 (aa)	XP_017339856	A0A2D0SAU9
ENSIPUT00000014779	-	2996	XM_017484370	ENSIPUP00000014183	549 (aa)	XP_017339859	A0A2D0SAV8

Gene Model

Click here to download ENSIPUG00000009673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009673's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009673	tdrkh	99	61.661	ENSAPOG00000012653	tdrkh	99	62.014	Acanthochromis_polyacanthus
ENSIPUG00000009673	tdrkh	97	60.000	ENSACIG00000010318	tdrkh	99	60.075	Amphilophus_citrinellus
ENSIPUG00000009673	tdrkh	99	61.607	ENSAOCG00000020623	tdrkh	99	61.964	Amphiprion_ocellaris
ENSIPUG00000009673	tdrkh	99	61.607	ENSAPEG00000018388	tdrkh	99	62.143	Amphiprion_percula
ENSIPUG00000009673	tdrkh	99	61.759	ENSATEG00000023809	tdrkh	99	61.759	Anabas_testudineus
ENSIPUG00000009673	tdrkh	99	60.180	ENSACLG00000003017	tdrkh	99	60.180	Astatotilapia_calliptera
ENSIPUG00000009673	tdrkh	99	80.474	ENSAMXG00000011664	tdrkh	94	80.474	Astyanax_mexicanus
ENSIPUG00000009673	tdrkh	99	57.821	ENSCSEG00000002894	tdrkh	99	57.821	Cynoglossus_semilaevis
ENSIPUG00000009673	tdrkh	61	70.388	ENSCVAG00000020347	tdrkh	77	70.388	Cyprinodon_variegatus
ENSIPUG00000009673	tdrkh	100	75.228	ENSDARG00000053474	tdrkh	100	72.038	Danio_rerio
ENSIPUG00000009673	tdrkh	99	65.385	ENSELUG00000024537	tdrkh	94	65.385	Esox_lucius
ENSIPUG00000009673	tdrkh	99	60.963	ENSFHEG00000003544	tdrkh	99	60.963	Fundulus_heteroclitus
ENSIPUG00000009673	tdrkh	99	60.289	ENSGMOG00000009304	tdrkh	94	60.289	Gadus_morhua
ENSIPUG00000009673	tdrkh	99	59.253	ENSGAFG00000010754	tdrkh	99	59.253	Gambusia_affinis
ENSIPUG00000009673	tdrkh	99	60.507	ENSGACG00000015258	tdrkh	94	60.507	Gasterosteus_aculeatus
ENSIPUG00000009673	tdrkh	99	60.360	ENSHBUG00000017609	tdrkh	99	60.360	Haplochromis_burtoni
ENSIPUG00000009673	tdrkh	99	58.750	ENSKMAG00000016638	tdrkh	93	59.750	Kryptolebias_marmoratus
ENSIPUG00000009673	tdrkh	99	59.107	ENSLBEG00000027323	tdrkh	97	59.107	Labrus_bergylta
ENSIPUG00000009673	tdrkh	99	55.694	ENSLOCG00000011381	tdrkh	99	55.694	Lepisosteus_oculatus
ENSIPUG00000009673	tdrkh	99	62.342	ENSMAMG00000020343	tdrkh	99	62.342	Mastacembelus_armatus
ENSIPUG00000009673	tdrkh	99	60.180	ENSMZEG00005006755	tdrkh	99	60.180	Maylandia_zebra
ENSIPUG00000009673	tdrkh	97	60.482	ENSMMOG00000020663	tdrkh	90	60.556	Mola_mola
ENSIPUG00000009673	tdrkh	99	60.682	ENSMALG00000015401	tdrkh	99	60.682	Monopterus_albus
ENSIPUG00000009673	tdrkh	99	58.664	ENSNBRG00000023815	tdrkh	99	58.664	Neolamprologus_brichardi
ENSIPUG00000009673	tdrkh	99	58.528	ENSORLG00000029204	tdrkh	99	58.528	Oryzias_latipes
ENSIPUG00000009673	tdrkh	90	58.317	ENSORLG00020016168	tdrkh	97	57.252	Oryzias_latipes_hni
ENSIPUG00000009673	tdrkh	97	57.934	ENSORLG00015014094	tdrkh	98	57.685	Oryzias_latipes_hsok
ENSIPUG00000009673	tdrkh	99	57.857	ENSOMEG00000015063	tdrkh	92	57.857	Oryzias_melastigma
ENSIPUG00000009673	tdrkh	99	63.024	ENSPKIG00000017597	tdrkh	99	63.024	Paramormyrops_kingsleyae
ENSIPUG00000009673	tdrkh	99	57.401	ENSPMGG00000019362	tdrkh	99	57.271	Periophthalmus_magnuspinnatus
ENSIPUG00000009673	tdrkh	99	59.541	ENSPFOG00000013032	tdrkh	94	59.541	Poecilia_formosa
ENSIPUG00000009673	tdrkh	99	59.364	ENSPLAG00000004193	tdrkh	99	59.364	Poecilia_latipinna
ENSIPUG00000009673	tdrkh	99	59.541	ENSPMEG00000016502	tdrkh	99	59.541	Poecilia_mexicana
ENSIPUG00000009673	tdrkh	99	57.420	ENSPREG00000004213	tdrkh	94	57.420	Poecilia_reticulata
ENSIPUG00000009673	tdrkh	97	59.665	ENSPNYG00000022818	tdrkh	97	59.740	Pundamilia_nyererei
ENSIPUG00000009673	tdrkh	100	82.878	ENSPNAG00000008783	tdrkh	94	82.878	Pygocentrus_nattereri
ENSIPUG00000009673	tdrkh	99	60.759	ENSSFOG00015001048	tdrkh	99	60.940	Scleropages_formosus
ENSIPUG00000009673	tdrkh	99	62.298	ENSSMAG00000001532	tdrkh	99	62.298	Scophthalmus_maximus
ENSIPUG00000009673	tdrkh	99	60.531	ENSSDUG00000013393	tdrkh	99	61.239	Seriola_dumerili
ENSIPUG00000009673	tdrkh	99	60.885	ENSSLDG00000017418	tdrkh	99	61.416	Seriola_lalandi_dorsalis
ENSIPUG00000009673	tdrkh	99	62.254	ENSSPAG00000006435	tdrkh	94	62.612	Stegastes_partitus
ENSIPUG00000009673	tdrkh	97	56.449	ENSTRUG00000006644	tdrkh	97	56.506	Takifugu_rubripes
ENSIPUG00000009673	tdrkh	100	57.117	ENSTNIG00000003157	tdrkh	100	57.117	Tetraodon_nigroviridis
ENSIPUG00000009673	tdrkh	73	76.471	ENSXCOG00000016972	tdrkh	92	76.471	Xiphophorus_couchianus
ENSIPUG00000009673	tdrkh	99	58.111	ENSXMAG00000014756	tdrkh	99	58.111	Xiphophorus_maculatus