EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000009705 (Gene tree)
Gene ID: 108261836
Gene Symbol: larp4b
Alias: zgc:153918
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18514 bases
Position: chrKV453807.1:63268-81781
Accession: 108261836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014234	La	PF05383.17	2.4e-13	1	1
ENSIPUP00000014197	La	PF05383.17	2.4e-13	1	1
ENSIPUP00000014241	La	PF05383.17	4.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000014795	-	4835	XM_017462603	ENSIPUP00000014197	713 (aa)	XP_017318092	A0A2D0QKI6
ENSIPUT00000014840	-	5979	XM_017462599	ENSIPUP00000014241	1169 (aa)	XP_017318088	-
ENSIPUT00000014833	-	2070	-	ENSIPUP00000014234	689 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000009705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000009705	larp4b	92	36.682	ENSIPUG00000021659	larp4ab	91	36.874
ENSIPUG00000009705	larp4b	90	35.802	ENSIPUG00000007514	larp4aa	85	36.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009705	larp4b	91	52.346	ENSG00000107929	LARP4B	90	52.500	Homo_sapiens
ENSIPUG00000009705	larp4b	96	51.159	ENSAPOG00000020531	LARP4B	88	58.744	Acanthochromis_polyacanthus
ENSIPUG00000009705	larp4b	93	52.137	ENSAMEG00000001810	LARP4B	92	52.279	Ailuropoda_melanoleuca
ENSIPUG00000009705	larp4b	91	52.044	ENSAOCG00000007887	-	69	85.714	Amphiprion_ocellaris
ENSIPUG00000009705	larp4b	96	53.793	ENSAPEG00000002512	LARP4B	93	54.219	Amphiprion_percula
ENSIPUG00000009705	larp4b	96	51.907	ENSATEG00000012614	LARP4B	93	52.524	Anabas_testudineus
ENSIPUG00000009705	larp4b	97	53.655	ENSAPLG00000003813	LARP4B	93	53.931	Anas_platyrhynchos
ENSIPUG00000009705	larp4b	93	55.066	ENSACAG00000002858	LARP4B	91	55.344	Anolis_carolinensis
ENSIPUG00000009705	larp4b	97	50.894	ENSANAG00000007531	-	95	51.032	Aotus_nancymaae
ENSIPUG00000009705	larp4b	97	53.587	ENSACLG00000026356	LARP4B	94	53.378	Astatotilapia_calliptera
ENSIPUG00000009705	larp4b	99	77.063	ENSAMXG00000003335	larp4b	99	76.243	Astyanax_mexicanus
ENSIPUG00000009705	larp4b	93	53.481	ENSBTAG00000013899	LARP4B	92	54.142	Bos_taurus
ENSIPUG00000009705	larp4b	97	49.658	ENSCJAG00000018434	LARP4B	92	50.640	Callithrix_jacchus
ENSIPUG00000009705	larp4b	93	52.137	ENSCAFG00020004209	LARP4B	91	55.944	Canis_lupus_dingo
ENSIPUG00000009705	larp4b	91	51.830	ENSCHIG00000013543	LARP4B	90	51.754	Capra_hircus
ENSIPUG00000009705	larp4b	78	57.597	ENSTSYG00000002568	LARP4B	93	57.774	Carlito_syrichta
ENSIPUG00000009705	larp4b	80	50.170	ENSCAPG00000009725	LARP4B	84	48.815	Cavia_aperea
ENSIPUG00000009705	larp4b	91	52.250	ENSCPOG00000009375	LARP4B	90	52.395	Cavia_porcellus
ENSIPUG00000009705	larp4b	93	51.143	ENSCCAG00000024869	LARP4B	92	51.714	Cebus_capucinus
ENSIPUG00000009705	larp4b	91	52.416	ENSCATG00000019750	LARP4B	90	52.562	Cercocebus_atys
ENSIPUG00000009705	larp4b	91	53.134	ENSCLAG00000011570	LARP4B	89	53.284	Chinchilla_lanigera
ENSIPUG00000009705	larp4b	97	53.258	ENSCPBG00000017063	LARP4B	95	53.541	Chrysemys_picta_bellii
ENSIPUG00000009705	larp4b	91	50.366	ENSCANG00000038021	LARP4B	89	50.512	Colobus_angolensis_palliatus
ENSIPUG00000009705	larp4b	93	52.639	ENSCGRG00001022930	Larp4b	92	52.782	Cricetulus_griseus_chok1gshd
ENSIPUG00000009705	larp4b	93	52.639	ENSCGRG00000006022	Larp4b	92	52.782	Cricetulus_griseus_crigri
ENSIPUG00000009705	larp4b	96	51.636	ENSCSEG00000007342	LARP4B	94	51.920	Cynoglossus_semilaevis
ENSIPUG00000009705	larp4b	98	51.733	ENSCVAG00000008910	LARP4B	93	51.867	Cyprinodon_variegatus
ENSIPUG00000009705	larp4b	99	65.608	ENSDARG00000062146	larp4b	98	66.851	Danio_rerio
ENSIPUG00000009705	larp4b	93	51.940	ENSDNOG00000045543	-	100	56.800	Dasypus_novemcinctus
ENSIPUG00000009705	larp4b	97	49.517	ENSDORG00000009328	Larp4b	95	49.655	Dipodomys_ordii
ENSIPUG00000009705	larp4b	84	54.046	ENSETEG00000011249	LARP4B	85	54.046	Echinops_telfairi
ENSIPUG00000009705	larp4b	93	51.441	ENSEASG00005019068	-	92	51.585	Equus_asinus_asinus
ENSIPUG00000009705	larp4b	93	51.220	ENSECAG00000024040	LARP4B	92	51.363	Equus_caballus
ENSIPUG00000009705	larp4b	93	49.294	ENSEEUG00000008391	LARP4B	94	48.313	Erinaceus_europaeus
ENSIPUG00000009705	larp4b	91	44.580	ENSELUG00000001417	-	99	43.510	Esox_lucius
ENSIPUG00000009705	larp4b	98	53.897	ENSELUG00000008626	LARP4B	96	54.161	Esox_lucius
ENSIPUG00000009705	larp4b	93	50.494	ENSFCAG00000000721	-	99	49.933	Felis_catus
ENSIPUG00000009705	larp4b	97	55.148	ENSFALG00000006961	LARP4B	95	55.430	Ficedula_albicollis
ENSIPUG00000009705	larp4b	97	50.414	ENSFDAG00000006158	LARP4B	92	50.552	Fukomys_damarensis
ENSIPUG00000009705	larp4b	96	47.191	ENSFHEG00000013037	LARP4B	64	85.470	Fundulus_heteroclitus
ENSIPUG00000009705	larp4b	79	59.548	ENSGMOG00000010818	-	88	60.101	Gadus_morhua
ENSIPUG00000009705	larp4b	97	53.944	ENSGALG00000006672	LARP4B	95	54.085	Gallus_gallus
ENSIPUG00000009705	larp4b	91	52.401	ENSGACG00000017535	LARP4B	96	51.181	Gasterosteus_aculeatus
ENSIPUG00000009705	larp4b	90	52.432	ENSGAGG00000008598	LARP4B	94	52.888	Gopherus_agassizii
ENSIPUG00000009705	larp4b	91	52.562	ENSGGOG00000003572	LARP4B	90	52.709	Gorilla_gorilla
ENSIPUG00000009705	larp4b	97	52.174	ENSHBUG00000007535	LARP4B	94	53.378	Haplochromis_burtoni
ENSIPUG00000009705	larp4b	93	51.289	ENSHGLG00000012936	LARP4B	92	51.433	Heterocephalus_glaber_female
ENSIPUG00000009705	larp4b	81	48.148	ENSHGLG00100017261	-	89	48.155	Heterocephalus_glaber_male
ENSIPUG00000009705	larp4b	93	51.506	ENSHGLG00100016220	-	92	51.650	Heterocephalus_glaber_male
ENSIPUG00000009705	larp4b	83	57.895	ENSHCOG00000011581	LARP4B	78	58.523	Hippocampus_comes
ENSIPUG00000009705	larp4b	93	51.906	ENSSTOG00000000587	LARP4B	91	51.982	Ictidomys_tridecemlineatus
ENSIPUG00000009705	larp4b	93	51.485	ENSJJAG00000020847	Larp4b	92	53.076	Jaculus_jaculus
ENSIPUG00000009705	larp4b	97	52.215	ENSKMAG00000021674	LARP4B	94	51.037	Kryptolebias_marmoratus
ENSIPUG00000009705	larp4b	83	56.594	ENSLBEG00000025293	-	81	58.000	Labrus_bergylta
ENSIPUG00000009705	larp4b	80	57.968	ENSLACG00000009492	LARP4B	83	57.461	Latimeria_chalumnae
ENSIPUG00000009705	larp4b	98	55.494	ENSLOCG00000012290	larp4b	96	55.772	Lepisosteus_oculatus
ENSIPUG00000009705	larp4b	97	50.000	ENSLAFG00000015334	LARP4B	95	51.180	Loxodonta_africana
ENSIPUG00000009705	larp4b	91	52.416	ENSMFAG00000001766	LARP4B	89	50.512	Macaca_fascicularis
ENSIPUG00000009705	larp4b	91	52.416	ENSMMUG00000005279	LARP4B	90	52.562	Macaca_mulatta
ENSIPUG00000009705	larp4b	91	52.269	ENSMNEG00000014019	LARP4B	89	50.366	Macaca_nemestrina
ENSIPUG00000009705	larp4b	97	50.892	ENSMLEG00000035198	LARP4B	95	51.032	Mandrillus_leucophaeus
ENSIPUG00000009705	larp4b	97	52.823	ENSMAMG00000013742	LARP4B	94	53.171	Mastacembelus_armatus
ENSIPUG00000009705	larp4b	80	55.500	ENSMZEG00005014594	-	92	52.941	Maylandia_zebra
ENSIPUG00000009705	larp4b	81	57.522	ENSMZEG00005006498	-	97	56.129	Maylandia_zebra
ENSIPUG00000009705	larp4b	97	51.503	ENSMGAG00000005472	LARP4B	95	52.049	Meleagris_gallopavo
ENSIPUG00000009705	larp4b	92	52.367	ENSMAUG00000021657	Larp4b	92	52.516	Mesocricetus_auratus
ENSIPUG00000009705	larp4b	90	54.490	ENSMICG00000001301	LARP4B	96	51.185	Microcebus_murinus
ENSIPUG00000009705	larp4b	83	53.833	ENSMOCG00000021452	Larp4b	92	52.987	Microtus_ochrogaster
ENSIPUG00000009705	larp4b	78	54.306	ENSMMOG00000011253	-	93	48.696	Mola_mola
ENSIPUG00000009705	larp4b	90	55.053	ENSMODG00000005957	LARP4B	95	52.486	Monodelphis_domestica
ENSIPUG00000009705	larp4b	96	47.851	ENSMALG00000012432	LARP4B	96	48.127	Monopterus_albus
ENSIPUG00000009705	larp4b	90	52.655	MGP_CAROLIEiJ_G0018216	Larp4b	96	52.333	Mus_caroli
ENSIPUG00000009705	larp4b	90	52.500	ENSMUSG00000033499	Larp4b	93	52.558	Mus_musculus
ENSIPUG00000009705	larp4b	93	51.857	MGP_PahariEiJ_G0019266	Larp4b	92	52.000	Mus_pahari
ENSIPUG00000009705	larp4b	90	52.500	MGP_SPRETEiJ_G0019074	Larp4b	93	52.713	Mus_spretus
ENSIPUG00000009705	larp4b	90	52.802	ENSMPUG00000016220	LARP4B	95	50.804	Mustela_putorius_furo
ENSIPUG00000009705	larp4b	86	53.659	ENSMLUG00000005880	LARP4B	91	53.071	Myotis_lucifugus
ENSIPUG00000009705	larp4b	96	50.694	ENSNGAG00000001750	Larp4b	94	50.833	Nannospalax_galili
ENSIPUG00000009705	larp4b	80	50.000	ENSNBRG00000020018	LARP4B	81	50.600	Neolamprologus_brichardi
ENSIPUG00000009705	larp4b	91	52.123	ENSNLEG00000013442	LARP4B	90	52.709	Nomascus_leucogenys
ENSIPUG00000009705	larp4b	79	41.860	ENSMEUG00000013114	-	79	42.151	Notamacropus_eugenii
ENSIPUG00000009705	larp4b	91	49.493	ENSOPRG00000003300	LARP4B	90	49.638	Ochotona_princeps
ENSIPUG00000009705	larp4b	93	47.763	ENSODEG00000001109	LARP4B	92	47.908	Octodon_degus
ENSIPUG00000009705	larp4b	97	52.767	ENSONIG00000017705	LARP4B	94	53.940	Oreochromis_niloticus
ENSIPUG00000009705	larp4b	97	51.226	ENSOANG00000006100	LARP4B	95	51.499	Ornithorhynchus_anatinus
ENSIPUG00000009705	larp4b	93	50.488	ENSOCUG00000004950	LARP4B	89	50.628	Oryctolagus_cuniculus
ENSIPUG00000009705	larp4b	97	52.710	ENSORLG00000006080	LARP4B	94	53.117	Oryzias_latipes
ENSIPUG00000009705	larp4b	97	52.162	ENSORLG00020020940	LARP4B	94	52.568	Oryzias_latipes_hni
ENSIPUG00000009705	larp4b	97	53.053	ENSORLG00015020608	LARP4B	94	53.324	Oryzias_latipes_hsok
ENSIPUG00000009705	larp4b	97	51.757	ENSOMEG00000019619	LARP4B	94	52.432	Oryzias_melastigma
ENSIPUG00000009705	larp4b	89	54.308	ENSOGAG00000011540	LARP4B	91	54.462	Otolemur_garnettii
ENSIPUG00000009705	larp4b	91	51.383	ENSOARG00000015320	LARP4B	89	51.528	Ovis_aries
ENSIPUG00000009705	larp4b	91	52.562	ENSPPAG00000039232	LARP4B	90	52.709	Pan_paniscus
ENSIPUG00000009705	larp4b	93	51.130	ENSPPRG00000009489	LARP4B	99	49.599	Panthera_pardus
ENSIPUG00000009705	larp4b	93	51.130	ENSPTIG00000008543	LARP4B	99	49.599	Panthera_tigris_altaica
ENSIPUG00000009705	larp4b	91	52.562	ENSPTRG00000002235	LARP4B	90	52.709	Pan_troglodytes
ENSIPUG00000009705	larp4b	91	52.416	ENSPANG00000023546	LARP4B	89	50.512	Papio_anubis
ENSIPUG00000009705	larp4b	98	52.559	ENSPKIG00000012368	LARP4B	96	53.463	Paramormyrops_kingsleyae
ENSIPUG00000009705	larp4b	79	63.580	ENSPSIG00000005600	LARP4B	99	64.198	Pelodiscus_sinensis
ENSIPUG00000009705	larp4b	91	49.392	ENSPMGG00000008261	LARP4B	83	49.772	Periophthalmus_magnuspinnatus
ENSIPUG00000009705	larp4b	98	50.614	ENSPEMG00000014052	Larp4b	96	50.750	Peromyscus_maniculatus_bairdii
ENSIPUG00000009705	larp4b	98	51.398	ENSPFOG00000000029	LARP4B	94	52.330	Poecilia_formosa
ENSIPUG00000009705	larp4b	98	52.247	ENSPLAG00000002871	LARP4B	94	52.330	Poecilia_latipinna
ENSIPUG00000009705	larp4b	98	51.197	ENSPMEG00000016361	LARP4B	94	52.128	Poecilia_mexicana
ENSIPUG00000009705	larp4b	91	52.416	ENSPPYG00000002035	LARP4B	87	52.562	Pongo_abelii
ENSIPUG00000009705	larp4b	98	50.889	ENSPCOG00000014688	LARP4B	96	51.026	Propithecus_coquereli
ENSIPUG00000009705	larp4b	79	51.783	ENSPVAG00000009784	LARP4B	81	51.613	Pteropus_vampyrus
ENSIPUG00000009705	larp4b	97	52.310	ENSPNYG00000024252	LARP4B	94	53.514	Pundamilia_nyererei
ENSIPUG00000009705	larp4b	100	76.349	ENSPNAG00000028956	larp4b	99	76.349	Pygocentrus_nattereri
ENSIPUG00000009705	larp4b	90	52.507	ENSRNOG00000015888	Larp4b	92	52.800	Rattus_norvegicus
ENSIPUG00000009705	larp4b	91	52.346	ENSRBIG00000033294	LARP4B	90	52.493	Rhinopithecus_bieti
ENSIPUG00000009705	larp4b	91	52.346	ENSRROG00000033879	LARP4B	90	52.493	Rhinopithecus_roxellana
ENSIPUG00000009705	larp4b	91	47.291	ENSSBOG00000021109	LARP4B	89	47.438	Saimiri_boliviensis_boliviensis
ENSIPUG00000009705	larp4b	97	53.352	ENSSHAG00000013392	LARP4B	95	52.933	Sarcophilus_harrisii
ENSIPUG00000009705	larp4b	98	51.377	ENSSFOG00015003256	LARP4B	89	52.617	Scleropages_formosus
ENSIPUG00000009705	larp4b	97	52.216	ENSSMAG00000005982	-	94	52.559	Scophthalmus_maximus
ENSIPUG00000009705	larp4b	94	53.547	ENSSDUG00000006704	LARP4B	94	53.639	Seriola_dumerili
ENSIPUG00000009705	larp4b	80	58.048	ENSSLDG00000020660	LARP4B	84	58.291	Seriola_lalandi_dorsalis
ENSIPUG00000009705	larp4b	57	82.474	ENSSARG00000001243	-	68	82.474	Sorex_araneus
ENSIPUG00000009705	larp4b	93	54.573	ENSSPUG00000002102	-	91	54.940	Sphenodon_punctatus
ENSIPUG00000009705	larp4b	75	58.736	ENSSPUG00000013734	-	82	59.108	Sphenodon_punctatus
ENSIPUG00000009705	larp4b	80	57.424	ENSSPAG00000014628	LARP4B	83	55.921	Stegastes_partitus
ENSIPUG00000009705	larp4b	91	51.622	ENSSSCG00000011162	LARP4B	97	54.139	Sus_scrofa
ENSIPUG00000009705	larp4b	97	54.391	ENSTGUG00000000811	-	95	54.674	Taeniopygia_guttata
ENSIPUG00000009705	larp4b	97	49.185	ENSTNIG00000007991	LARP4B	99	51.156	Tetraodon_nigroviridis
ENSIPUG00000009705	larp4b	97	49.864	ENSTNIG00000004571	-	93	50.479	Tetraodon_nigroviridis
ENSIPUG00000009705	larp4b	69	54.403	ENSTTRG00000011151	LARP4B	68	55.090	Tursiops_truncatus
ENSIPUG00000009705	larp4b	83	54.455	ENSUAMG00000016461	LARP4B	86	54.620	Ursus_americanus
ENSIPUG00000009705	larp4b	92	51.926	ENSUMAG00000016127	LARP4B	92	52.068	Ursus_maritimus
ENSIPUG00000009705	larp4b	93	51.994	ENSVVUG00000008641	LARP4B	91	55.944	Vulpes_vulpes
ENSIPUG00000009705	larp4b	97	54.108	ENSXETG00000016882	larp4b	95	54.802	Xenopus_tropicalis
ENSIPUG00000009705	larp4b	98	48.901	ENSXCOG00000019952	LARP4B	65	82.645	Xiphophorus_couchianus
ENSIPUG00000009705	larp4b	98	52.139	ENSXMAG00000021533	LARP4B	94	52.540	Xiphophorus_maculatus