EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000009785 (Gene tree)
Gene ID: 108279433
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 8950 bases
Position: chr19:10226777-10235726
Accession: 108279433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014352	tRNA_Me_trans	PF03054.16	7.4e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000014953	-	3717	XM_017493682	ENSIPUP00000014352	406 (aa)	XP_017349171	W5UEK3

Gene Model

Click here to download ENSIPUG00000009785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009785's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009785	trmu	98	70.529	ENSG00000100416	TRMU	100	78.571	Homo_sapiens
ENSIPUG00000009785	trmu	99	79.259	ENSAPOG00000014458	trmu	97	79.259	Acanthochromis_polyacanthus
ENSIPUG00000009785	trmu	98	70.529	ENSAMEG00000003319	TRMU	95	70.529	Ailuropoda_melanoleuca
ENSIPUG00000009785	trmu	99	77.057	ENSACIG00000002101	trmu	96	77.057	Amphilophus_citrinellus
ENSIPUG00000009785	trmu	99	79.753	ENSAOCG00000013155	trmu	97	79.753	Amphiprion_ocellaris
ENSIPUG00000009785	trmu	99	79.506	ENSAPEG00000013350	trmu	97	79.506	Amphiprion_percula
ENSIPUG00000009785	trmu	100	79.805	ENSATEG00000007814	trmu	100	79.805	Anabas_testudineus
ENSIPUG00000009785	trmu	93	70.106	ENSAPLG00000016380	TRMU	96	70.106	Anas_platyrhynchos
ENSIPUG00000009785	trmu	98	69.444	ENSACAG00000007720	TRMU	95	69.444	Anolis_carolinensis
ENSIPUG00000009785	trmu	98	70.529	ENSANAG00000038053	TRMU	94	70.529	Aotus_nancymaae
ENSIPUG00000009785	trmu	99	78.304	ENSACLG00000005395	trmu	98	78.320	Astatotilapia_calliptera
ENSIPUG00000009785	trmu	99	85.679	ENSAMXG00000005282	trmu	98	85.679	Astyanax_mexicanus
ENSIPUG00000009785	trmu	98	70.025	ENSBTAG00000005595	TRMU	95	70.025	Bos_taurus
ENSIPUG00000009785	trmu	94	40.769	WBGene00007114	mttu-1	98	40.769	Caenorhabditis_elegans
ENSIPUG00000009785	trmu	98	69.424	ENSCJAG00000000198	TRMU	95	69.424	Callithrix_jacchus
ENSIPUG00000009785	trmu	98	70.426	ENSCAFG00000000779	TRMU	94	70.426	Canis_familiaris
ENSIPUG00000009785	trmu	98	70.426	ENSCAFG00020009184	TRMU	94	70.426	Canis_lupus_dingo
ENSIPUG00000009785	trmu	98	69.521	ENSCHIG00000017074	TRMU	95	69.521	Capra_hircus
ENSIPUG00000009785	trmu	98	70.677	ENSTSYG00000003853	TRMU	95	70.677	Carlito_syrichta
ENSIPUG00000009785	trmu	95	66.253	ENSCAPG00000013034	TRMU	95	66.253	Cavia_aperea
ENSIPUG00000009785	trmu	98	70.426	ENSCPOG00000020780	TRMU	95	70.426	Cavia_porcellus
ENSIPUG00000009785	trmu	98	69.521	ENSCCAG00000021641	TRMU	94	69.521	Cebus_capucinus
ENSIPUG00000009785	trmu	98	70.277	ENSCATG00000032800	TRMU	94	70.277	Cercocebus_atys
ENSIPUG00000009785	trmu	98	71.930	ENSCLAG00000017269	TRMU	95	71.930	Chinchilla_lanigera
ENSIPUG00000009785	trmu	98	70.529	ENSCSAG00000005279	TRMU	94	70.529	Chlorocebus_sabaeus
ENSIPUG00000009785	trmu	92	69.973	ENSCPBG00000011621	TRMU	93	69.973	Chrysemys_picta_bellii
ENSIPUG00000009785	trmu	97	46.465	ENSCING00000019371	-	97	46.465	Ciona_intestinalis
ENSIPUG00000009785	trmu	98	70.529	ENSCANG00000041645	TRMU	94	70.529	Colobus_angolensis_palliatus
ENSIPUG00000009785	trmu	100	68.627	ENSCGRG00001001739	Trmu	97	68.627	Cricetulus_griseus_chok1gshd
ENSIPUG00000009785	trmu	100	64.216	ENSCGRG00000002781	Trmu	98	64.216	Cricetulus_griseus_crigri
ENSIPUG00000009785	trmu	99	75.062	ENSCSEG00000012382	trmu	97	75.062	Cynoglossus_semilaevis
ENSIPUG00000009785	trmu	98	79.950	ENSCVAG00000001366	trmu	96	79.950	Cyprinodon_variegatus
ENSIPUG00000009785	trmu	98	80.451	ENSDARG00000043734	trmu	96	80.451	Danio_rerio
ENSIPUG00000009785	trmu	65	57.519	ENSDNOG00000047245	-	92	57.519	Dasypus_novemcinctus
ENSIPUG00000009785	trmu	98	70.426	ENSDORG00000007455	Trmu	97	70.426	Dipodomys_ordii
ENSIPUG00000009785	trmu	95	43.523	FBgn0040337	CG3021	95	43.523	Drosophila_melanogaster
ENSIPUG00000009785	trmu	95	56.266	ENSEBUG00000007454	trmu	99	55.685	Eptatretus_burgeri
ENSIPUG00000009785	trmu	98	70.426	ENSEASG00005021725	TRMU	95	70.426	Equus_asinus_asinus
ENSIPUG00000009785	trmu	98	70.426	ENSECAG00000000467	TRMU	95	70.426	Equus_caballus
ENSIPUG00000009785	trmu	69	53.025	ENSEEUG00000000074	-	67	53.025	Erinaceus_europaeus
ENSIPUG00000009785	trmu	98	81.407	ENSELUG00000009464	trmu	99	80.707	Esox_lucius
ENSIPUG00000009785	trmu	98	70.927	ENSFCAG00000006533	TRMU	95	70.927	Felis_catus
ENSIPUG00000009785	trmu	92	69.291	ENSFALG00000010035	TRMU	96	69.291	Ficedula_albicollis
ENSIPUG00000009785	trmu	91	71.159	ENSFDAG00000017472	TRMU	94	71.159	Fukomys_damarensis
ENSIPUG00000009785	trmu	98	80.451	ENSFHEG00000003162	trmu	98	80.109	Fundulus_heteroclitus
ENSIPUG00000009785	trmu	98	71.216	ENSGMOG00000001323	trmu	99	71.216	Gadus_morhua
ENSIPUG00000009785	trmu	98	70.297	ENSGALG00000031922	TRMU	95	70.297	Gallus_gallus
ENSIPUG00000009785	trmu	99	80.798	ENSGAFG00000013331	trmu	96	80.798	Gambusia_affinis
ENSIPUG00000009785	trmu	100	75.177	ENSGACG00000019024	trmu	100	75.177	Gasterosteus_aculeatus
ENSIPUG00000009785	trmu	98	70.529	ENSGGOG00000000203	TRMU	94	70.529	Gorilla_gorilla
ENSIPUG00000009785	trmu	99	77.805	ENSHBUG00000023421	trmu	98	77.778	Haplochromis_burtoni
ENSIPUG00000009785	trmu	98	71.178	ENSHGLG00000009278	TRMU	95	71.178	Heterocephalus_glaber_female
ENSIPUG00000009785	trmu	98	71.178	ENSHGLG00100018863	TRMU	95	71.178	Heterocephalus_glaber_male
ENSIPUG00000009785	trmu	98	81.864	ENSHCOG00000013459	trmu	96	81.864	Hippocampus_comes
ENSIPUG00000009785	trmu	100	69.363	ENSSTOG00000010993	TRMU	97	69.363	Ictidomys_tridecemlineatus
ENSIPUG00000009785	trmu	100	68.382	ENSJJAG00000000667	Trmu	98	68.382	Jaculus_jaculus
ENSIPUG00000009785	trmu	99	78.713	ENSKMAG00000008516	trmu	97	78.713	Kryptolebias_marmoratus
ENSIPUG00000009785	trmu	100	78.365	ENSLBEG00000018831	trmu	100	78.365	Labrus_bergylta
ENSIPUG00000009785	trmu	99	74.876	ENSLACG00000013713	TRMU	96	74.876	Latimeria_chalumnae
ENSIPUG00000009785	trmu	98	81.454	ENSLOCG00000016066	trmu	95	81.454	Lepisosteus_oculatus
ENSIPUG00000009785	trmu	98	61.692	ENSLAFG00000005129	TRMU	96	61.692	Loxodonta_africana
ENSIPUG00000009785	trmu	98	70.529	ENSMFAG00000039767	TRMU	94	70.529	Macaca_fascicularis
ENSIPUG00000009785	trmu	98	70.529	ENSMMUG00000000807	TRMU	94	70.529	Macaca_mulatta
ENSIPUG00000009785	trmu	98	70.529	ENSMNEG00000028164	TRMU	94	70.529	Macaca_nemestrina
ENSIPUG00000009785	trmu	98	70.277	ENSMLEG00000033884	TRMU	94	70.277	Mandrillus_leucophaeus
ENSIPUG00000009785	trmu	98	79.699	ENSMAMG00000004717	trmu	96	79.699	Mastacembelus_armatus
ENSIPUG00000009785	trmu	98	78.697	ENSMZEG00005015797	trmu	96	78.697	Maylandia_zebra
ENSIPUG00000009785	trmu	79	68.807	ENSMGAG00000007550	TRMU	96	68.807	Meleagris_gallopavo
ENSIPUG00000009785	trmu	100	68.382	ENSMAUG00000022282	Trmu	98	68.382	Mesocricetus_auratus
ENSIPUG00000009785	trmu	98	70.426	ENSMICG00000029046	TRMU	97	70.426	Microcebus_murinus
ENSIPUG00000009785	trmu	100	69.363	ENSMOCG00000014641	Trmu	98	69.363	Microtus_ochrogaster
ENSIPUG00000009785	trmu	100	76.683	ENSMMOG00000007229	trmu	100	76.683	Mola_mola
ENSIPUG00000009785	trmu	99	67.157	ENSMODG00000007433	TRMU	95	67.157	Monodelphis_domestica
ENSIPUG00000009785	trmu	98	79.198	ENSMALG00000007721	trmu	96	79.198	Monopterus_albus
ENSIPUG00000009785	trmu	100	67.892	MGP_CAROLIEiJ_G0020134	Trmu	98	67.892	Mus_caroli
ENSIPUG00000009785	trmu	100	68.382	ENSMUSG00000022386	Trmu	98	68.382	Mus_musculus
ENSIPUG00000009785	trmu	100	68.137	MGP_PahariEiJ_G0020139	Trmu	98	68.137	Mus_pahari
ENSIPUG00000009785	trmu	100	68.382	MGP_SPRETEiJ_G0021031	Trmu	98	68.382	Mus_spretus
ENSIPUG00000009785	trmu	98	70.175	ENSMPUG00000002523	TRMU	95	70.175	Mustela_putorius_furo
ENSIPUG00000009785	trmu	99	69.042	ENSNGAG00000005132	Trmu	98	69.042	Nannospalax_galili
ENSIPUG00000009785	trmu	99	78.765	ENSNBRG00000022690	trmu	99	78.765	Neolamprologus_brichardi
ENSIPUG00000009785	trmu	98	71.033	ENSNLEG00000015773	TRMU	94	71.033	Nomascus_leucogenys
ENSIPUG00000009785	trmu	81	60.671	ENSMEUG00000000216	TRMU	99	60.671	Notamacropus_eugenii
ENSIPUG00000009785	trmu	99	71.072	ENSODEG00000014745	TRMU	97	70.720	Octodon_degus
ENSIPUG00000009785	trmu	99	77.805	ENSONIG00000009821	trmu	96	77.805	Oreochromis_niloticus
ENSIPUG00000009785	trmu	92	68.700	ENSOANG00000001891	TRMU	95	68.700	Ornithorhynchus_anatinus
ENSIPUG00000009785	trmu	92	69.624	ENSOCUG00000003664	TRMU	93	68.462	Oryctolagus_cuniculus
ENSIPUG00000009785	trmu	98	75.940	ENSORLG00000019015	trmu	96	75.940	Oryzias_latipes
ENSIPUG00000009785	trmu	98	75.940	ENSORLG00020006830	trmu	96	75.940	Oryzias_latipes_hni
ENSIPUG00000009785	trmu	98	75.940	ENSORLG00015003907	trmu	96	75.940	Oryzias_latipes_hsok
ENSIPUG00000009785	trmu	58	75.527	ENSOMEG00000015541	trmu	86	75.527	Oryzias_melastigma
ENSIPUG00000009785	trmu	98	69.925	ENSOGAG00000008096	TRMU	96	69.925	Otolemur_garnettii
ENSIPUG00000009785	trmu	94	66.142	ENSOARG00000019475	TRMU	93	66.142	Ovis_aries
ENSIPUG00000009785	trmu	98	70.781	ENSPPAG00000033944	TRMU	94	70.781	Pan_paniscus
ENSIPUG00000009785	trmu	98	70.927	ENSPPRG00000004197	TRMU	95	70.927	Panthera_pardus
ENSIPUG00000009785	trmu	68	70.036	ENSPTIG00000014122	TRMU	97	71.863	Panthera_tigris_altaica
ENSIPUG00000009785	trmu	98	70.781	ENSPTRG00000014510	TRMU	94	70.781	Pan_troglodytes
ENSIPUG00000009785	trmu	99	69.403	ENSPANG00000023074	TRMU	93	69.403	Papio_anubis
ENSIPUG00000009785	trmu	100	78.019	ENSPKIG00000002849	trmu	100	78.019	Paramormyrops_kingsleyae
ENSIPUG00000009785	trmu	91	70.461	ENSPSIG00000013020	TRMU	96	70.461	Pelodiscus_sinensis
ENSIPUG00000009785	trmu	99	79.302	ENSPMGG00000004083	trmu	97	79.302	Periophthalmus_magnuspinnatus
ENSIPUG00000009785	trmu	100	68.137	ENSPEMG00000014007	Trmu	98	68.137	Peromyscus_maniculatus_bairdii
ENSIPUG00000009785	trmu	96	69.821	ENSPCIG00000009923	TRMU	93	69.620	Phascolarctos_cinereus
ENSIPUG00000009785	trmu	96	76.350	ENSPFOG00000008197	trmu	87	76.350	Poecilia_formosa
ENSIPUG00000009785	trmu	98	80.201	ENSPLAG00000008414	trmu	96	80.201	Poecilia_latipinna
ENSIPUG00000009785	trmu	98	80.451	ENSPMEG00000004326	trmu	96	80.451	Poecilia_mexicana
ENSIPUG00000009785	trmu	98	80.952	ENSPREG00000007980	trmu	96	80.952	Poecilia_reticulata
ENSIPUG00000009785	trmu	98	70.426	ENSPPYG00000011949	TRMU	95	70.426	Pongo_abelii
ENSIPUG00000009785	trmu	93	63.492	ENSPCAG00000013462	TRMU	97	63.492	Procavia_capensis
ENSIPUG00000009785	trmu	98	69.925	ENSPCOG00000016539	TRMU	96	69.925	Propithecus_coquereli
ENSIPUG00000009785	trmu	98	64.411	ENSPVAG00000013202	TRMU	96	64.411	Pteropus_vampyrus
ENSIPUG00000009785	trmu	99	78.304	ENSPNYG00000005629	trmu	96	78.304	Pundamilia_nyererei
ENSIPUG00000009785	trmu	97	89.873	ENSPNAG00000006339	trmu	93	89.873	Pygocentrus_nattereri
ENSIPUG00000009785	trmu	100	67.647	ENSRNOG00000016465	Trmu	98	67.647	Rattus_norvegicus
ENSIPUG00000009785	trmu	98	69.521	ENSRBIG00000038973	TRMU	94	69.521	Rhinopithecus_bieti
ENSIPUG00000009785	trmu	98	69.773	ENSRROG00000004267	TRMU	94	69.773	Rhinopithecus_roxellana
ENSIPUG00000009785	trmu	93	34.152	YDL033C	SLM3	91	34.152	Saccharomyces_cerevisiae
ENSIPUG00000009785	trmu	98	70.277	ENSSBOG00000030184	TRMU	94	70.277	Saimiri_boliviensis_boliviensis
ENSIPUG00000009785	trmu	90	79.396	ENSSFOG00015020664	trmu	96	79.396	Scleropages_formosus
ENSIPUG00000009785	trmu	98	79.699	ENSSMAG00000019450	trmu	96	79.699	Scophthalmus_maximus
ENSIPUG00000009785	trmu	99	79.455	ENSSDUG00000011913	trmu	97	79.455	Seriola_dumerili
ENSIPUG00000009785	trmu	99	79.208	ENSSLDG00000011684	trmu	97	79.208	Seriola_lalandi_dorsalis
ENSIPUG00000009785	trmu	98	61.111	ENSSPUG00000017123	TRMU	93	61.111	Sphenodon_punctatus
ENSIPUG00000009785	trmu	99	78.713	ENSSPAG00000021875	trmu	97	78.713	Stegastes_partitus
ENSIPUG00000009785	trmu	98	70.426	ENSSSCG00000000007	TRMU	95	70.426	Sus_scrofa
ENSIPUG00000009785	trmu	92	71.046	ENSTGUG00000003663	-	100	71.046	Taeniopygia_guttata
ENSIPUG00000009785	trmu	99	80.494	ENSTRUG00000001231	trmu	98	80.494	Takifugu_rubripes
ENSIPUG00000009785	trmu	99	78.657	ENSTNIG00000010484	trmu	98	78.657	Tetraodon_nigroviridis
ENSIPUG00000009785	trmu	74	56.522	ENSTBEG00000011276	-	78	56.522	Tupaia_belangeri
ENSIPUG00000009785	trmu	98	69.925	ENSTTRG00000004160	TRMU	95	69.925	Tursiops_truncatus
ENSIPUG00000009785	trmu	72	71.478	ENSUAMG00000024825	TRMU	97	71.478	Ursus_americanus
ENSIPUG00000009785	trmu	96	58.824	ENSUMAG00000019079	TRMU	97	70.312	Ursus_maritimus
ENSIPUG00000009785	trmu	54	62.557	ENSVPAG00000000685	-	100	62.557	Vicugna_pacos
ENSIPUG00000009785	trmu	98	69.674	ENSVVUG00000024963	TRMU	95	69.674	Vulpes_vulpes
ENSIPUG00000009785	trmu	99	73.086	ENSXETG00000023304	trmu	95	73.086	Xenopus_tropicalis
ENSIPUG00000009785	trmu	98	79.353	ENSXCOG00000015105	trmu	96	79.353	Xiphophorus_couchianus
ENSIPUG00000009785	trmu	98	81.203	ENSXMAG00000006697	trmu	96	81.203	Xiphophorus_maculatus