EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000009841 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5947 bases
Position: chr20:8324198-8330144
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014416	RVT_1	PF00078.27	5.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015022	-	747	-	ENSIPUP00000014416	248 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000009841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000009841	-	70	97.688	ENSIPUG00000010429	-	67	97.688
ENSIPUG00000009841	-	70	99.422	ENSIPUG00000002371	-	67	99.422
ENSIPUG00000009841	-	70	98.266	ENSIPUG00000000759	-	79	98.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009841	-	55	33.577	ENSACIG00000009946	-	54	33.577	Amphilophus_citrinellus
ENSIPUG00000009841	-	61	33.742	ENSAMXG00000038547	-	61	33.742	Astyanax_mexicanus
ENSIPUG00000009841	-	50	34.127	ENSHCOG00000007511	-	54	34.127	Hippocampus_comes
ENSIPUG00000009841	-	60	34.228	ENSLACG00000002750	-	54	32.500	Latimeria_chalumnae