EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000009844 (Gene tree)
Gene ID
108255936
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
17750 bases
Position
chr2:15195911-15213660
Accession
108255936
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000014424RRM_1PF00076.222.5e-3313
ENSIPUP00000014424RRM_1PF00076.222.5e-3323
ENSIPUP00000014424RRM_1PF00076.222.5e-3333
ENSIPUP00000014440RRM_1PF00076.223.6e-3313
ENSIPUP00000014440RRM_1PF00076.223.6e-3323
ENSIPUP00000014440RRM_1PF00076.223.6e-3333
ENSIPUP00000014470RRM_1PF00076.223.6e-2112
ENSIPUP00000014470RRM_1PF00076.223.6e-2122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000015047-3210XM_017452332ENSIPUP00000014440487 (aa)XP_017307821-
ENSIPUT00000015030-3102XM_017452324ENSIPUP00000014424451 (aa)XP_017307813A0A2D0PQX5
ENSIPUT00000015077-1179-ENSIPUP00000014470392 (aa)--
Gene Model
Click here to download ENSIPUG00000009844's gene model file
Pathways
Pathway IDPathway NameSource
ipu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009844's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000009844-7538.235ENSIPUG00000004660puf60b6538.235
ENSIPUG00000009844-10071.212ENSIPUG00000009077u2af29973.434
ENSIPUG00000009844-10068.398ENSIPUG00000007717u2af2a9970.563
ENSIPUG00000009844-8237.255ENSIPUG00000002453puf60a6037.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000009844-10070.000ENSG00000063244U2AF29979.739Homo_sapiens
ENSIPUG00000009844-10086.481ENSAPOG00000002208-10086.910Acanthochromis_polyacanthus
ENSIPUG00000009844-6773.602ENSAPOG00000023155u2af2a9973.602Acanthochromis_polyacanthus
ENSIPUG00000009844-8075.691ENSAMEG00000003864U2AF210072.087Ailuropoda_melanoleuca
ENSIPUG00000009844-8477.895ENSACIG00000005749u2af2a9974.126Amphilophus_citrinellus
ENSIPUG00000009844-9684.096ENSACIG00000014173-9984.532Amphilophus_citrinellus
ENSIPUG00000009844-10070.897ENSAOCG00000015571u2af2a10073.961Amphiprion_ocellaris
ENSIPUG00000009844-10086.910ENSAOCG00000003595-10087.339Amphiprion_ocellaris
ENSIPUG00000009844-9884.176ENSAPEG00000020062-9884.615Amphiprion_percula
ENSIPUG00000009844-8478.158ENSAPEG00000009376u2af2a9971.724Amphiprion_percula
ENSIPUG00000009844-9686.222ENSATEG00000020577-9986.696Anabas_testudineus
ENSIPUG00000009844-10069.723ENSATEG00000022332u2af2a9971.855Anabas_testudineus
ENSIPUG00000009844-10070.299ENSACAG00000015489U2AF29973.932Anolis_carolinensis
ENSIPUG00000009844-10067.218ENSANAG00000028042U2AF29971.901Aotus_nancymaae
ENSIPUG00000009844-10086.695ENSACLG00000020793-10087.124Astatotilapia_calliptera
ENSIPUG00000009844-10070.149ENSACLG00000022181u2af2a9974.186Astatotilapia_calliptera
ENSIPUG00000009844-10068.443ENSAMXG00000033347u2af2a9971.915Astyanax_mexicanus
ENSIPUG00000009844-10072.527ENSAMXG00000039454u2af2b9974.342Astyanax_mexicanus
ENSIPUG00000009844-10071.648ENSBTAG00000002830U2AF29976.044Bos_taurus
ENSIPUG00000009844-8656.298WBGene00006697uaf-110053.425Caenorhabditis_elegans
ENSIPUG00000009844-10069.620ENSCJAG00000017128U2AF29974.449Callithrix_jacchus
ENSIPUG00000009844-10070.000ENSCAFG00000002551U2AF29973.617Canis_familiaris
ENSIPUG00000009844-8778.141ENSCAFG00020015445U2AF29971.822Canis_lupus_dingo
ENSIPUG00000009844-8765.586ENSCHIG00000023595U2AF29563.303Capra_hircus
ENSIPUG00000009844-10069.620ENSTSYG00000007432U2AF29973.894Carlito_syrichta
ENSIPUG00000009844-8976.225ENSCAPG00000008466U2AF29972.867Cavia_aperea
ENSIPUG00000009844-10069.409ENSCPOG00000001582U2AF29972.996Cavia_porcellus
ENSIPUG00000009844-10069.620ENSCCAG00000023336U2AF29973.207Cebus_capucinus
ENSIPUG00000009844-10070.000ENSCATG00000004637U2AF29973.617Cercocebus_atys
ENSIPUG00000009844-10070.000ENSCLAG00000000596U2AF29973.617Chinchilla_lanigera
ENSIPUG00000009844-10070.000ENSCSAG00000001722U2AF29973.617Chlorocebus_sabaeus
ENSIPUG00000009844-8576.904ENSCPBG00000004485U2AF29979.739Chrysemys_picta_bellii
ENSIPUG00000009844-8569.845ENSCING00000003455-9364.459Ciona_intestinalis
ENSIPUG00000009844-8668.205ENSCSAVG00000006813-9962.039Ciona_savignyi
ENSIPUG00000009844-10064.606ENSCANG00000043845-9969.296Colobus_angolensis_palliatus
ENSIPUG00000009844-9168.925ENSCANG00000031002-9672.897Colobus_angolensis_palliatus
ENSIPUG00000009844-10065.672ENSCGRG00001007486-9968.803Cricetulus_griseus_chok1gshd
ENSIPUG00000009844-10071.648ENSCGRG00001003185-9976.044Cricetulus_griseus_chok1gshd
ENSIPUG00000009844-5377.406ENSCGRG00000004524-8274.308Cricetulus_griseus_crigri
ENSIPUG00000009844-10065.672ENSCGRG00000018587-9968.803Cricetulus_griseus_crigri
ENSIPUG00000009844-10081.466ENSCSEG00000020504-9683.908Cynoglossus_semilaevis
ENSIPUG00000009844-6376.562ENSCSEG00000018709u2af2a9670.513Cynoglossus_semilaevis
ENSIPUG00000009844-10070.897ENSCVAG00000001259u2af2a9973.961Cyprinodon_variegatus
ENSIPUG00000009844-10085.408ENSCVAG00000023307-10085.837Cyprinodon_variegatus
ENSIPUG00000009844-10068.565ENSDARG00000011740u2af2b9970.886Danio_rerio
ENSIPUG00000009844-10069.612ENSDARG00000012505u2af2a9972.198Danio_rerio
ENSIPUG00000009844-9168.925ENSDNOG00000047039U2AF29672.897Dasypus_novemcinctus
ENSIPUG00000009844-10069.620ENSDORG00000003250U2af29973.207Dipodomys_ordii
ENSIPUG00000009844-8850.591FBgn0034834LS29649.446Drosophila_melanogaster
ENSIPUG00000009844-8570.361FBgn0005411U2af5010070.380Drosophila_melanogaster
ENSIPUG00000009844-9060.880ENSEBUG00000001732U2AF29759.234Eptatretus_burgeri
ENSIPUG00000009844-10066.593ENSEBUG00000010917U2AF210066.593Eptatretus_burgeri
ENSIPUG00000009844-8678.283ENSEASG00005020708U2AF29172.727Equus_asinus_asinus
ENSIPUG00000009844-10071.648ENSECAG00000010110U2AF29976.044Equus_caballus
ENSIPUG00000009844-10084.120ENSELUG00000018459-10084.549Esox_lucius
ENSIPUG00000009844-10072.113ENSELUG00000022291u2af2b9972.113Esox_lucius
ENSIPUG00000009844-10067.992ENSELUG00000015850u2af2a9969.874Esox_lucius
ENSIPUG00000009844-10069.620ENSFCAG00000011504U2AF29973.207Felis_catus
ENSIPUG00000009844-8976.225ENSFDAG00000011264U2AF29971.581Fukomys_damarensis
ENSIPUG00000009844-10070.897ENSFHEG00000016025u2af2a9973.961Fundulus_heteroclitus
ENSIPUG00000009844-10071.304ENSGMOG00000004535u2af2a9973.261Gadus_morhua
ENSIPUG00000009844-9870.241ENSGALG00000052748U2AF26573.961Gallus_gallus
ENSIPUG00000009844-10070.897ENSGAFG00000013626u2af2a8873.961Gambusia_affinis
ENSIPUG00000009844-10087.582ENSGAFG00000005628-10087.582Gambusia_affinis
ENSIPUG00000009844-10070.742ENSGACG00000010632U2AF29974.017Gasterosteus_aculeatus
ENSIPUG00000009844-10082.166ENSGACG00000014500-10084.110Gasterosteus_aculeatus
ENSIPUG00000009844-6779.739ENSGAGG00000011849U2AF29979.739Gopherus_agassizii
ENSIPUG00000009844-10086.695ENSHBUG00000017424-10087.124Haplochromis_burtoni
ENSIPUG00000009844-10070.149ENSHBUG00000013935u2af2a9974.126Haplochromis_burtoni
ENSIPUG00000009844-10069.620ENSHGLG00000005889U2AF29973.207Heterocephalus_glaber_female
ENSIPUG00000009844-8976.471ENSHGLG00100004757U2AF29973.085Heterocephalus_glaber_male
ENSIPUG00000009844-10067.888ENSHCOG00000019367u2af2a9972.198Hippocampus_comes
ENSIPUG00000009844-10069.620ENSSTOG00000019595U2AF29973.207Ictidomys_tridecemlineatus
ENSIPUG00000009844-10069.620ENSJJAG00000017705U2af29973.207Jaculus_jaculus
ENSIPUG00000009844-10069.936ENSKMAG00000005960u2af2a9974.032Kryptolebias_marmoratus
ENSIPUG00000009844-10071.116ENSLBEG00000016162u2af2a9974.179Labrus_bergylta
ENSIPUG00000009844-9681.264ENSLBEG00000005001-9983.878Labrus_bergylta
ENSIPUG00000009844-8178.962ENSLACG00000001648U2AF29978.962Latimeria_chalumnae
ENSIPUG00000009844-10081.116ENSLOCG00000010843-10083.691Lepisosteus_oculatus
ENSIPUG00000009844-6081.356ENSLOCG00000008050u2af2b9375.692Lepisosteus_oculatus
ENSIPUG00000009844-10070.000ENSLAFG00000018056-9973.830Loxodonta_africana
ENSIPUG00000009844-10065.745ENSLAFG00000028496-9965.745Loxodonta_africana
ENSIPUG00000009844-10069.620ENSMFAG00000038383U2AF29973.207Macaca_fascicularis
ENSIPUG00000009844-10069.409ENSMMUG00000004810U2AF29972.996Macaca_mulatta
ENSIPUG00000009844-10070.000ENSMNEG00000042096U2AF29875.336Macaca_nemestrina
ENSIPUG00000009844-8976.980ENSMLEG00000032219U2AF28973.568Mandrillus_leucophaeus
ENSIPUG00000009844-10082.189ENSMAMG00000020158-10084.549Mastacembelus_armatus
ENSIPUG00000009844-10069.762ENSMAMG00000019817u2af2a9972.786Mastacembelus_armatus
ENSIPUG00000009844-10086.695ENSMZEG00005023318-10087.124Maylandia_zebra
ENSIPUG00000009844-10070.678ENSMZEG00005016563u2af2a9973.742Maylandia_zebra
ENSIPUG00000009844-8976.471ENSMAUG00000008180U2af29972.629Mesocricetus_auratus
ENSIPUG00000009844-10070.000ENSMICG00000027681U2AF29974.279Microcebus_murinus
ENSIPUG00000009844-10069.620ENSMOCG00000013214-9973.207Microtus_ochrogaster
ENSIPUG00000009844-6777.124ENSMOCG00000001018-9977.124Microtus_ochrogaster
ENSIPUG00000009844-10067.377ENSMOCG00000007227-9967.377Microtus_ochrogaster
ENSIPUG00000009844-10077.253ENSMMOG00000000531-10077.253Mola_mola
ENSIPUG00000009844-8478.158ENSMMOG00000016600u2af2a9974.478Mola_mola
ENSIPUG00000009844-10071.991ENSMALG00000009985u2af2a9974.398Monopterus_albus
ENSIPUG00000009844-10070.000MGP_CAROLIEiJ_G0029150U2af29973.617Mus_caroli
ENSIPUG00000009844-10070.000ENSMUSG00000030435U2af29979.739Mus_musculus
ENSIPUG00000009844-10070.000MGP_PahariEiJ_G0021017U2af29973.617Mus_pahari
ENSIPUG00000009844-10070.000MGP_SPRETEiJ_G0030203U2af29973.617Mus_spretus
ENSIPUG00000009844-10070.000ENSMPUG00000007135U2AF29973.617Mustela_putorius_furo
ENSIPUG00000009844-5276.250ENSMLUG00000011051-9976.250Myotis_lucifugus
ENSIPUG00000009844-10069.620ENSNGAG00000020369U2af29973.207Nannospalax_galili
ENSIPUG00000009844-10070.149ENSNBRG00000002568u2af2a9974.126Neolamprologus_brichardi
ENSIPUG00000009844-9684.532ENSNBRG00000011100-10084.698Neolamprologus_brichardi
ENSIPUG00000009844-10064.333ENSNLEG00000010562U2AF29979.739Nomascus_leucogenys
ENSIPUG00000009844-8965.347ENSMEUG00000002346U2AF29963.135Notamacropus_eugenii
ENSIPUG00000009844-10064.557ENSODEG00000012729-9968.143Octodon_degus
ENSIPUG00000009844-9856.473ENSODEG00000009254-9957.812Octodon_degus
ENSIPUG00000009844-10086.695ENSONIG00000009682-10087.124Oreochromis_niloticus
ENSIPUG00000009844-10069.053ENSONIG00000012793u2af2a9971.822Oreochromis_niloticus
ENSIPUG00000009844-10070.362ENSORLG00000011545u2af2a9973.288Oryzias_latipes
ENSIPUG00000009844-10070.362ENSORLG00020006941u2af2a9973.288Oryzias_latipes_hni
ENSIPUG00000009844-10070.362ENSORLG00015012843u2af2a9972.708Oryzias_latipes_hsok
ENSIPUG00000009844-10070.513ENSOMEG00000011386u2af2a9973.963Oryzias_melastigma
ENSIPUG00000009844-10069.620ENSOGAG00000007206-9973.207Otolemur_garnettii
ENSIPUG00000009844-7955.041ENSOGAG00000034729-7855.041Otolemur_garnettii
ENSIPUG00000009844-10065.000ENSOARG00000001091U2AF29966.667Ovis_aries
ENSIPUG00000009844-10069.620ENSPPAG00000039782U2AF29973.207Pan_paniscus
ENSIPUG00000009844-10069.620ENSPPRG00000013843U2AF29973.207Panthera_pardus
ENSIPUG00000009844-9966.377ENSPTIG00000005489U2AF29867.627Panthera_tigris_altaica
ENSIPUG00000009844-10069.620ENSPTRG00000011523U2AF29979.739Pan_troglodytes
ENSIPUG00000009844-10070.000ENSPANG00000008459U2AF29973.617Papio_anubis
ENSIPUG00000009844-10083.262ENSPKIG00000014878-10084.549Paramormyrops_kingsleyae
ENSIPUG00000009844-10068.803ENSPKIG00000024346u2af2b9974.194Paramormyrops_kingsleyae
ENSIPUG00000009844-8957.447ENSPSIG00000008014U2AF29955.864Pelodiscus_sinensis
ENSIPUG00000009844-8470.513ENSPMGG00000022980u2af2a9967.261Periophthalmus_magnuspinnatus
ENSIPUG00000009844-10069.620ENSPEMG00000007378U2af29979.739Peromyscus_maniculatus_bairdii
ENSIPUG00000009844-8473.958ENSPMAG00000004097u2af2a10070.435Petromyzon_marinus
ENSIPUG00000009844-10069.409ENSPCIG00000018013U2AF29972.996Phascolarctos_cinereus
ENSIPUG00000009844-10088.017ENSPFOG00000006433-10088.017Poecilia_formosa
ENSIPUG00000009844-10070.576ENSPFOG00000010799u2af2a10072.281Poecilia_formosa
ENSIPUG00000009844-10070.897ENSPLAG00000014365u2af2a9973.961Poecilia_latipinna
ENSIPUG00000009844-9487.209ENSPLAG00000003275-9986.966Poecilia_latipinna
ENSIPUG00000009844-10070.897ENSPMEG00000002969u2af2a9973.961Poecilia_mexicana
ENSIPUG00000009844-9487.209ENSPMEG00000003734-9986.966Poecilia_mexicana
ENSIPUG00000009844-10085.837ENSPREG00000013036-10088.356Poecilia_reticulata
ENSIPUG00000009844-10070.576ENSPREG00000008739u2af2a9974.032Poecilia_reticulata
ENSIPUG00000009844-6078.182ENSPPYG00000010429-9478.182Pongo_abelii
ENSIPUG00000009844-10055.789ENSPCAG00000014399-9959.368Procavia_capensis
ENSIPUG00000009844-8670.408ENSPCAG00000003709-9670.408Procavia_capensis
ENSIPUG00000009844-10069.620ENSPCOG00000025870U2AF29974.279Propithecus_coquereli
ENSIPUG00000009844-10069.409ENSPVAG00000004540U2AF29972.996Pteropus_vampyrus
ENSIPUG00000009844-10086.695ENSPNYG00000011605-10087.124Pundamilia_nyererei
ENSIPUG00000009844-10070.149ENSPNYG00000001438u2af2a9974.126Pundamilia_nyererei
ENSIPUG00000009844-10072.747ENSPNAG00000027289u2af2b9974.561Pygocentrus_nattereri
ENSIPUG00000009844-10088.412ENSPNAG00000007182-10088.841Pygocentrus_nattereri
ENSIPUG00000009844-10069.481ENSPNAG00000017620u2af2a9972.944Pygocentrus_nattereri
ENSIPUG00000009844-10070.000ENSRNOG00000015914U2af29973.617Rattus_norvegicus
ENSIPUG00000009844-10069.409ENSRBIG00000041018U2AF29972.996Rhinopithecus_bieti
ENSIPUG00000009844-10065.957ENSRROG00000031238-9969.149Rhinopithecus_roxellana
ENSIPUG00000009844-8076.164ENSRROG00000031103-10072.464Rhinopithecus_roxellana
ENSIPUG00000009844-10070.000ENSSBOG00000023891U2AF29973.617Saimiri_boliviensis_boliviensis
ENSIPUG00000009844-5969.065ENSSHAG00000001167U2AF28659.091Sarcophilus_harrisii
ENSIPUG00000009844-8777.273ENSSFOG00015019182u2af2b8977.273Scleropages_formosus
ENSIPUG00000009844-10084.120ENSSFOG00015003884-10084.120Scleropages_formosus
ENSIPUG00000009844-10083.476ENSSMAG00000013779-10085.622Scophthalmus_maximus
ENSIPUG00000009844-10070.524ENSSMAG00000012582u2af2a9973.581Scophthalmus_maximus
ENSIPUG00000009844-9684.165ENSSDUG00000021434-9484.632Seriola_dumerili
ENSIPUG00000009844-10070.678ENSSDUG00000009457u2af2a10073.742Seriola_dumerili
ENSIPUG00000009844-9684.165ENSSLDG00000016151-10084.335Seriola_lalandi_dorsalis
ENSIPUG00000009844-10070.678ENSSLDG00000022742u2af2a9973.742Seriola_lalandi_dorsalis
ENSIPUG00000009844-10069.345ENSSPUG00000010229U2AF29972.939Sphenodon_punctatus
ENSIPUG00000009844-10070.362ENSSPAG00000022519u2af2a9972.068Stegastes_partitus
ENSIPUG00000009844-10086.695ENSSPAG00000005241-10087.124Stegastes_partitus
ENSIPUG00000009844-10071.648ENSSSCG00000034815U2AF29976.044Sus_scrofa
ENSIPUG00000009844-8476.316ENSTRUG00000005514u2af2a9872.273Takifugu_rubripes
ENSIPUG00000009844-10083.878ENSTNIG00000011257-10085.621Tetraodon_nigroviridis
ENSIPUG00000009844-10071.154ENSTNIG00000008106U2AF29972.436Tetraodon_nigroviridis
ENSIPUG00000009844-8073.554ENSTBEG00000009104U2AF29973.554Tupaia_belangeri
ENSIPUG00000009844-10069.620ENSTTRG00000000987U2AF29973.207Tursiops_truncatus
ENSIPUG00000009844-8678.283ENSUAMG00000019883U2AF29972.687Ursus_americanus
ENSIPUG00000009844-8678.283ENSUMAG00000024586U2AF29979.739Ursus_maritimus
ENSIPUG00000009844-8976.980ENSVVUG00000006956U2AF26775.278Vulpes_vulpes
ENSIPUG00000009844-10071.983ENSXETG00000019128u2af29974.569Xenopus_tropicalis
ENSIPUG00000009844-8478.421ENSXCOG00000019406u2af2a9973.684Xiphophorus_couchianus
ENSIPUG00000009844-10070.897ENSXMAG00000011979u2af2a9973.961Xiphophorus_maculatus
ENSIPUG00000009844-10085.837ENSXMAG00000000768-9686.266Xiphophorus_maculatus

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