EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000009862 (Gene tree)
Gene ID: 108270993
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 10561 bases
Position: chr10:3030987-3041547
Accession: 108270993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000014502	tRNA_anti-codon	PF01336.25	1.6e-12	1	1
ENSIPUP00000014452	tRNA_anti-codon	PF01336.25	1.8e-12	1	1
ENSIPUP00000014468	tRNA_anti-codon	PF01336.25	2e-12	1	1
ENSIPUP00000014452	tRNA-synt_2	PF00152.20	7.4e-80	1	1
ENSIPUP00000014468	tRNA-synt_2	PF00152.20	8.6e-80	1	1
ENSIPUP00000014502	tRNA-synt_2	PF00152.20	7.6e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000015060	-	2535	XM_017478109	ENSIPUP00000014452	575 (aa)	XP_017333598	A0A2D0RSW7
ENSIPUT00000015111	-	1629	-	ENSIPUP00000014502	542 (aa)	-	-
ENSIPUT00000015076	-	2640	XM_017478106	ENSIPUP00000014468	606 (aa)	XP_017333595	A0A2D0RTU4

Gene Model

Click here to download ENSIPUG00000009862's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000009862's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000009862	kars	98	79.756	ENSG00000065427	KARS	100	88.235	Homo_sapiens
ENSIPUG00000009862	kars	100	87.674	ENSAPOG00000010997	kars	100	87.674	Acanthochromis_polyacanthus
ENSIPUG00000009862	kars	98	79.225	ENSAMEG00000005347	KARS	91	79.401	Ailuropoda_melanoleuca
ENSIPUG00000009862	kars	100	85.590	ENSACIG00000000304	kars	100	85.590	Amphilophus_citrinellus
ENSIPUG00000009862	kars	98	89.362	ENSAOCG00000012971	kars	97	89.068	Amphiprion_ocellaris
ENSIPUG00000009862	kars	100	89.273	ENSAPEG00000011144	kars	100	89.273	Amphiprion_percula
ENSIPUG00000009862	kars	100	88.408	ENSATEG00000004954	kars	100	88.408	Anabas_testudineus
ENSIPUG00000009862	kars	94	79.412	ENSAPLG00000012705	KARS	98	79.412	Anas_platyrhynchos
ENSIPUG00000009862	kars	99	78.201	ENSACAG00000007577	KARS	92	77.929	Anolis_carolinensis
ENSIPUG00000009862	kars	99	79.346	ENSANAG00000030403	-	97	79.346	Aotus_nancymaae
ENSIPUG00000009862	kars	98	65.972	ENSANAG00000031739	-	94	64.634	Aotus_nancymaae
ENSIPUG00000009862	kars	100	91.667	ENSACLG00000001613	kars	98	91.667	Astatotilapia_calliptera
ENSIPUG00000009862	kars	100	91.854	ENSAMXG00000030719	kars	100	91.854	Astyanax_mexicanus
ENSIPUG00000009862	kars	99	78.608	ENSBTAG00000015677	KARS	76	78.608	Bos_taurus
ENSIPUG00000009862	kars	96	61.622	WBGene00002238	kars-1	97	63.600	Caenorhabditis_elegans
ENSIPUG00000009862	kars	99	79.188	ENSCJAG00000014213	KARS	99	79.188	Callithrix_jacchus
ENSIPUG00000009862	kars	96	80.536	ENSCAFG00000020069	KARS	90	80.714	Canis_familiaris
ENSIPUG00000009862	kars	98	80.454	ENSCAFG00020001721	KARS	96	80.454	Canis_lupus_dingo
ENSIPUG00000009862	kars	99	79.117	ENSCHIG00000014108	-	99	79.117	Capra_hircus
ENSIPUG00000009862	kars	100	75.265	ENSCHIG00000016073	-	91	78.611	Capra_hircus
ENSIPUG00000009862	kars	98	80.702	ENSTSYG00000001643	KARS	97	80.639	Carlito_syrichta
ENSIPUG00000009862	kars	98	73.205	ENSCAPG00000016234	KARS	96	73.205	Cavia_aperea
ENSIPUG00000009862	kars	99	79.658	ENSCPOG00000012036	KARS	98	79.658	Cavia_porcellus
ENSIPUG00000009862	kars	93	64.652	ENSCCAG00000030337	-	99	64.652	Cebus_capucinus
ENSIPUG00000009862	kars	99	79.690	ENSCCAG00000034307	-	97	79.690	Cebus_capucinus
ENSIPUG00000009862	kars	98	79.232	ENSCATG00000038129	KARS	97	78.360	Cercocebus_atys
ENSIPUG00000009862	kars	98	80.245	ENSCLAG00000007905	KARS	96	80.245	Chinchilla_lanigera
ENSIPUG00000009862	kars	96	79.107	ENSCSAG00000003664	KARS	90	79.286	Chlorocebus_sabaeus
ENSIPUG00000009862	kars	78	85.301	ENSCHOG00000013447	KARS	72	85.301	Choloepus_hoffmanni
ENSIPUG00000009862	kars	99	79.381	ENSCPBG00000026969	KARS	98	79.381	Chrysemys_picta_bellii
ENSIPUG00000009862	kars	93	71.650	ENSCPBG00000002553	-	93	74.175	Chrysemys_picta_bellii
ENSIPUG00000009862	kars	100	65.972	ENSCING00000009513	-	100	65.972	Ciona_intestinalis
ENSIPUG00000009862	kars	56	71.895	ENSCSAVG00000001136	-	100	70.881	Ciona_savignyi
ENSIPUG00000009862	kars	97	68.280	ENSCSAVG00000007684	-	98	67.314	Ciona_savignyi
ENSIPUG00000009862	kars	98	74.869	ENSCANG00000032813	KARS	96	74.869	Colobus_angolensis_palliatus
ENSIPUG00000009862	kars	99	80.311	ENSCGRG00001004055	KARS	97	80.311	Cricetulus_griseus_chok1gshd
ENSIPUG00000009862	kars	99	80.311	ENSCGRG00000014242	KARS	97	80.311	Cricetulus_griseus_crigri
ENSIPUG00000009862	kars	99	90.104	ENSCSEG00000008324	kars	99	90.104	Cynoglossus_semilaevis
ENSIPUG00000009862	kars	99	90.000	ENSCVAG00000019686	kars	99	90.000	Cyprinodon_variegatus
ENSIPUG00000009862	kars	100	91.176	ENSDARG00000103799	kars	99	93.398	Danio_rerio
ENSIPUG00000009862	kars	98	78.720	ENSDNOG00000002241	KARS	92	78.893	Dasypus_novemcinctus
ENSIPUG00000009862	kars	99	79.483	ENSDORG00000004780	-	97	79.483	Dipodomys_ordii
ENSIPUG00000009862	kars	96	62.234	ENSDORG00000024214	-	96	60.854	Dipodomys_ordii
ENSIPUG00000009862	kars	99	70.906	FBgn0027084	LysRS	99	70.906	Drosophila_melanogaster
ENSIPUG00000009862	kars	97	80.071	ENSETEG00000008353	KARS	91	80.247	Echinops_telfairi
ENSIPUG00000009862	kars	98	70.053	ENSEBUG00000001284	-	97	70.035	Eptatretus_burgeri
ENSIPUG00000009862	kars	98	80.560	ENSEASG00005013497	KARS	96	80.560	Equus_asinus_asinus
ENSIPUG00000009862	kars	98	80.560	ENSECAG00000013424	KARS	96	80.560	Equus_caballus
ENSIPUG00000009862	kars	96	73.703	ENSEEUG00000007042	KARS	91	72.935	Erinaceus_europaeus
ENSIPUG00000009862	kars	98	82.092	ENSELUG00000014575	kars	97	82.092	Esox_lucius
ENSIPUG00000009862	kars	99	79.861	ENSFCAG00000008573	KARS	97	79.381	Felis_catus
ENSIPUG00000009862	kars	100	78.778	ENSFALG00000002543	KARS	100	78.778	Ficedula_albicollis
ENSIPUG00000009862	kars	98	80.245	ENSFDAG00000007155	KARS	96	80.245	Fukomys_damarensis
ENSIPUG00000009862	kars	100	87.175	ENSFHEG00000006172	kars	100	87.175	Fundulus_heteroclitus
ENSIPUG00000009862	kars	98	87.324	ENSGMOG00000002633	kars	99	84.176	Gadus_morhua
ENSIPUG00000009862	kars	99	79.655	ENSGALG00000000907	KARS	99	79.825	Gallus_gallus
ENSIPUG00000009862	kars	99	88.889	ENSGAFG00000017252	kars	99	89.062	Gambusia_affinis
ENSIPUG00000009862	kars	100	87.263	ENSGACG00000015749	kars	100	84.502	Gasterosteus_aculeatus
ENSIPUG00000009862	kars	93	70.874	ENSGAGG00000011960	-	96	74.213	Gopherus_agassizii
ENSIPUG00000009862	kars	98	80.628	ENSGAGG00000023836	KARS	97	80.628	Gopherus_agassizii
ENSIPUG00000009862	kars	98	79.581	ENSGGOG00000005515	KARS	96	79.581	Gorilla_gorilla
ENSIPUG00000009862	kars	100	91.667	ENSHBUG00000013619	kars	98	91.667	Haplochromis_burtoni
ENSIPUG00000009862	kars	99	71.552	ENSHGLG00000015235	-	97	71.552	Heterocephalus_glaber_female
ENSIPUG00000009862	kars	98	80.594	ENSHGLG00000011898	KARS	97	80.859	Heterocephalus_glaber_female
ENSIPUG00000009862	kars	99	64.334	ENSHGLG00000001298	-	97	64.334	Heterocephalus_glaber_female
ENSIPUG00000009862	kars	99	64.164	ENSHGLG00100006466	-	97	64.164	Heterocephalus_glaber_male
ENSIPUG00000009862	kars	99	71.379	ENSHGLG00100012523	-	97	71.379	Heterocephalus_glaber_male
ENSIPUG00000009862	kars	98	80.594	ENSHGLG00100012264	KARS	96	80.594	Heterocephalus_glaber_male
ENSIPUG00000009862	kars	100	89.619	ENSHCOG00000002900	kars	97	89.619	Hippocampus_comes
ENSIPUG00000009862	kars	99	79.181	ENSSTOG00000004205	KARS	98	79.181	Ictidomys_tridecemlineatus
ENSIPUG00000009862	kars	99	79.725	ENSJJAG00000020406	Kars	98	79.897	Jaculus_jaculus
ENSIPUG00000009862	kars	100	87.889	ENSKMAG00000006434	kars	100	87.889	Kryptolebias_marmoratus
ENSIPUG00000009862	kars	100	89.965	ENSLBEG00000026537	kars	100	87.049	Labrus_bergylta
ENSIPUG00000009862	kars	98	81.261	ENSLACG00000006667	KARS	93	81.185	Latimeria_chalumnae
ENSIPUG00000009862	kars	91	73.964	ENSLACG00000016399	-	99	76.923	Latimeria_chalumnae
ENSIPUG00000009862	kars	93	70.019	ENSLOCG00000013608	-	97	70.205	Lepisosteus_oculatus
ENSIPUG00000009862	kars	100	89.465	ENSLOCG00000004002	kars	99	89.465	Lepisosteus_oculatus
ENSIPUG00000009862	kars	96	79.821	ENSLAFG00000015340	KARS	90	80.000	Loxodonta_africana
ENSIPUG00000009862	kars	98	79.058	ENSMFAG00000040024	KARS	96	79.058	Macaca_fascicularis
ENSIPUG00000009862	kars	87	76.621	ENSMNEG00000035832	-	98	76.621	Macaca_nemestrina
ENSIPUG00000009862	kars	98	79.058	ENSMNEG00000042879	-	96	79.058	Macaca_nemestrina
ENSIPUG00000009862	kars	98	79.058	ENSMLEG00000034947	KARS	96	79.058	Mandrillus_leucophaeus
ENSIPUG00000009862	kars	99	88.194	ENSMAMG00000021559	kars	100	86.885	Mastacembelus_armatus
ENSIPUG00000009862	kars	100	91.667	ENSMZEG00005014382	kars	98	91.667	Maylandia_zebra
ENSIPUG00000009862	kars	98	77.098	ENSMGAG00000009000	KARS	98	79.385	Meleagris_gallopavo
ENSIPUG00000009862	kars	99	79.492	ENSMICG00000011997	KARS	99	79.492	Microcebus_murinus
ENSIPUG00000009862	kars	99	80.829	ENSMOCG00000011829	Kars	97	80.829	Microtus_ochrogaster
ENSIPUG00000009862	kars	99	78.125	ENSMOCG00000019029	-	97	78.125	Microtus_ochrogaster
ENSIPUG00000009862	kars	98	89.520	ENSMMOG00000016934	kars	100	89.520	Mola_mola
ENSIPUG00000009862	kars	98	77.915	ENSMODG00000002215	-	98	78.092	Monodelphis_domestica
ENSIPUG00000009862	kars	98	74.735	ENSMODG00000002238	-	89	77.407	Monodelphis_domestica
ENSIPUG00000009862	kars	100	88.581	ENSMALG00000020858	kars	100	88.581	Monopterus_albus
ENSIPUG00000009862	kars	84	78.836	MGP_CAROLIEiJ_G0031588	Kars	97	78.836	Mus_caroli
ENSIPUG00000009862	kars	99	81.002	ENSMUSG00000031948	Kars	97	81.002	Mus_musculus
ENSIPUG00000009862	kars	99	80.311	MGP_PahariEiJ_G0023186	Kars	97	80.138	Mus_pahari
ENSIPUG00000009862	kars	99	80.829	MGP_SPRETEiJ_G0032706	Kars	97	80.829	Mus_spretus
ENSIPUG00000009862	kars	98	79.262	ENSMPUG00000009871	KARS	91	79.438	Mustela_putorius_furo
ENSIPUG00000009862	kars	81	53.333	ENSMLUG00000026871	-	76	53.333	Myotis_lucifugus
ENSIPUG00000009862	kars	99	79.110	ENSMLUG00000015119	-	98	79.110	Myotis_lucifugus
ENSIPUG00000009862	kars	95	79.496	ENSNGAG00000022944	-	95	79.496	Nannospalax_galili
ENSIPUG00000009862	kars	99	79.758	ENSNGAG00000018820	-	97	79.758	Nannospalax_galili
ENSIPUG00000009862	kars	100	91.493	ENSNBRG00000011098	kars	98	91.493	Neolamprologus_brichardi
ENSIPUG00000009862	kars	98	79.930	ENSNLEG00000013072	KARS	96	79.930	Nomascus_leucogenys
ENSIPUG00000009862	kars	97	76.882	ENSMEUG00000008684	KARS	98	73.211	Notamacropus_eugenii
ENSIPUG00000009862	kars	98	79.549	ENSOPRG00000012544	KARS	94	79.723	Ochotona_princeps
ENSIPUG00000009862	kars	97	58.244	ENSODEG00000009464	-	97	57.885	Octodon_degus
ENSIPUG00000009862	kars	99	80.000	ENSODEG00000013099	-	99	80.069	Octodon_degus
ENSIPUG00000009862	kars	100	91.493	ENSONIG00000005937	kars	99	91.493	Oreochromis_niloticus
ENSIPUG00000009862	kars	98	81.152	ENSOANG00000008179	KARS	97	81.152	Ornithorhynchus_anatinus
ENSIPUG00000009862	kars	99	74.828	ENSOCUG00000015553	KARS	97	74.828	Oryctolagus_cuniculus
ENSIPUG00000009862	kars	98	88.693	ENSORLG00000007627	kars	99	85.691	Oryzias_latipes
ENSIPUG00000009862	kars	98	88.516	ENSORLG00020010056	kars	99	85.691	Oryzias_latipes_hni
ENSIPUG00000009862	kars	98	88.516	ENSORLG00015008179	kars	99	85.691	Oryzias_latipes_hsok
ENSIPUG00000009862	kars	99	88.715	ENSOMEG00000001710	kars	99	88.715	Oryzias_melastigma
ENSIPUG00000009862	kars	98	73.875	ENSOGAG00000005903	KARS	92	74.048	Otolemur_garnettii
ENSIPUG00000009862	kars	93	79.520	ENSOARG00000006928	KARS	95	79.520	Ovis_aries
ENSIPUG00000009862	kars	98	79.407	ENSPPAG00000036192	KARS	96	79.407	Pan_paniscus
ENSIPUG00000009862	kars	99	80.035	ENSPPRG00000003027	KARS	97	79.518	Panthera_pardus
ENSIPUG00000009862	kars	99	79.861	ENSPTIG00000008011	KARS	97	79.346	Panthera_tigris_altaica
ENSIPUG00000009862	kars	98	79.581	ENSPTRG00000008364	KARS	96	79.581	Pan_troglodytes
ENSIPUG00000009862	kars	98	79.232	ENSPANG00000024106	KARS	90	79.643	Papio_anubis
ENSIPUG00000009862	kars	100	89.810	ENSPKIG00000009896	kars	100	89.810	Paramormyrops_kingsleyae
ENSIPUG00000009862	kars	97	80.357	ENSPSIG00000009294	KARS	96	80.536	Pelodiscus_sinensis
ENSIPUG00000009862	kars	96	69.216	ENSPSIG00000003041	-	94	74.464	Pelodiscus_sinensis
ENSIPUG00000009862	kars	97	91.964	ENSPMGG00000006117	kars	100	91.964	Periophthalmus_magnuspinnatus
ENSIPUG00000009862	kars	99	80.000	ENSPEMG00000012277	Kars	97	80.000	Peromyscus_maniculatus_bairdii
ENSIPUG00000009862	kars	97	75.133	ENSPMAG00000008360	-	91	75.887	Petromyzon_marinus
ENSIPUG00000009862	kars	98	76.543	ENSPCIG00000025469	-	99	72.295	Phascolarctos_cinereus
ENSIPUG00000009862	kars	99	79.585	ENSPCIG00000010761	-	97	79.412	Phascolarctos_cinereus
ENSIPUG00000009862	kars	98	88.810	ENSPFOG00000013253	kars	99	85.855	Poecilia_formosa
ENSIPUG00000009862	kars	99	88.715	ENSPLAG00000004189	kars	99	88.715	Poecilia_latipinna
ENSIPUG00000009862	kars	99	88.889	ENSPMEG00000015698	kars	99	88.889	Poecilia_mexicana
ENSIPUG00000009862	kars	99	89.236	ENSPREG00000023179	kars	99	89.410	Poecilia_reticulata
ENSIPUG00000009862	kars	96	80.357	ENSPPYG00000007567	KARS	90	80.536	Pongo_abelii
ENSIPUG00000009862	kars	88	75.644	ENSPCAG00000010790	KARS	97	75.644	Procavia_capensis
ENSIPUG00000009862	kars	99	72.603	ENSPCOG00000003166	KARS	90	81.443	Propithecus_coquereli
ENSIPUG00000009862	kars	96	80.893	ENSPVAG00000006746	KARS	90	81.071	Pteropus_vampyrus
ENSIPUG00000009862	kars	100	91.667	ENSPNYG00000013095	kars	98	91.667	Pundamilia_nyererei
ENSIPUG00000009862	kars	100	91.508	ENSPNAG00000013828	kars	100	91.508	Pygocentrus_nattereri
ENSIPUG00000009862	kars	98	79.789	ENSRNOG00000019456	Kars	91	80.316	Rattus_norvegicus
ENSIPUG00000009862	kars	98	78.709	ENSRBIG00000030118	KARS	97	77.836	Rhinopithecus_bieti
ENSIPUG00000009862	kars	96	78.966	ENSRROG00000041418	KARS	97	77.836	Rhinopithecus_roxellana
ENSIPUG00000009862	kars	80	34.021	YNL073W	-	82	34.737	Saccharomyces_cerevisiae
ENSIPUG00000009862	kars	97	57.092	YDR037W	KRS1	94	57.270	Saccharomyces_cerevisiae
ENSIPUG00000009862	kars	99	79.518	ENSSBOG00000019255	KARS	97	79.518	Saimiri_boliviensis_boliviensis
ENSIPUG00000009862	kars	98	74.081	ENSSHAG00000001359	-	98	74.256	Sarcophilus_harrisii
ENSIPUG00000009862	kars	96	67.039	ENSSHAG00000009005	-	96	70.037	Sarcophilus_harrisii
ENSIPUG00000009862	kars	98	65.464	ENSSHAG00000002050	-	89	66.486	Sarcophilus_harrisii
ENSIPUG00000009862	kars	97	90.126	ENSSFOG00015014837	kars	98	90.092	Scleropages_formosus
ENSIPUG00000009862	kars	100	89.965	ENSSMAG00000021441	kars	100	89.965	Scophthalmus_maximus
ENSIPUG00000009862	kars	100	91.522	ENSSDUG00000001202	kars	100	91.522	Seriola_dumerili
ENSIPUG00000009862	kars	98	91.135	ENSSLDG00000021220	kars	98	91.312	Seriola_lalandi_dorsalis
ENSIPUG00000009862	kars	80	81.595	ENSSARG00000011493	KARS	72	86.552	Sorex_araneus
ENSIPUG00000009862	kars	65	68.946	ENSSPUG00000000449	-	82	68.946	Sphenodon_punctatus
ENSIPUG00000009862	kars	99	80.409	ENSSPUG00000004974	KARS	98	80.136	Sphenodon_punctatus
ENSIPUG00000009862	kars	98	90.231	ENSSPAG00000020365	kars	97	90.231	Stegastes_partitus
ENSIPUG00000009862	kars	99	79.553	ENSSSCG00000002704	KARS	97	79.553	Sus_scrofa
ENSIPUG00000009862	kars	97	80.714	ENSTGUG00000008400	KARS	100	80.714	Taeniopygia_guttata
ENSIPUG00000009862	kars	98	86.146	ENSTRUG00000017551	kars	100	83.498	Takifugu_rubripes
ENSIPUG00000009862	kars	98	86.903	ENSTNIG00000009351	kars	97	87.189	Tetraodon_nigroviridis
ENSIPUG00000009862	kars	98	61.632	ENSTBEG00000004610	KARS	81	70.021	Tupaia_belangeri
ENSIPUG00000009862	kars	98	79.066	ENSTTRG00000001221	KARS	92	79.239	Tursiops_truncatus
ENSIPUG00000009862	kars	99	79.174	ENSUAMG00000017557	KARS	97	79.174	Ursus_americanus
ENSIPUG00000009862	kars	98	79.401	ENSUMAG00000014559	KARS	91	79.577	Ursus_maritimus
ENSIPUG00000009862	kars	98	76.990	ENSVPAG00000003716	KARS	92	77.163	Vicugna_pacos
ENSIPUG00000009862	kars	98	80.105	ENSVVUG00000024338	KARS	96	80.561	Vulpes_vulpes
ENSIPUG00000009862	kars	100	79.352	ENSXETG00000003569	kars	100	78.328	Xenopus_tropicalis
ENSIPUG00000009862	kars	97	89.427	ENSXCOG00000011313	kars	99	89.606	Xiphophorus_couchianus
ENSIPUG00000009862	kars	99	89.236	ENSXMAG00000003191	kars	99	89.410	Xiphophorus_maculatus